Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 SNORA27.3-201ENST00000364937 134 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 Y_RNA.302-201ENST00000364997 102 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 SNORA8.1-201ENST00000384250 140 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 HMGB1P10-201ENST00000395823 563 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 SNRPGP10-201ENST00000432323 225 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 AC093850.1-201ENST00000454121 251 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 MTND4P17-201ENST00000470444 350 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 Y_RNA.682-201ENST00000516457 100 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 RNU6-966P-201ENST00000516479 104 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 AP003733.2-201ENST00000529409 171 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 AL157871.3-201ENST00000557231 293 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 MIR4648-201ENST00000580107 72 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 AC008121.1-201ENST00000603244 268 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 RNU6-92P-201ENST00000605893 104 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 AL590410.1-201ENST00000617925 333 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 PVT1_3.1-201ENST00000620853 95 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 uc_338.22-201ENST00000622722 187 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 AL773545.4-201ENST00000637262 310 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 AL513478.4-201ENST00000641636 310 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 Y_RNA.171-201ENST00000363760 102 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 RNU4-50P-201ENST00000364361 141 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 RNU6-946P-201ENST00000383878 107 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 RNU6-1035P-201ENST00000384477 107 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 Y_RNA.518-201ENST00000384552 113 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 SNORA64-201ENST00000384674 134 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 Y_RNA.645-201ENST00000391229 102 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 MIR1302-7-201ENST00000408841 72 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 MTCO1P5-201ENST00000433573 344 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 RPL37P21-201ENST00000435890 276 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 SNRPGP5-201ENST00000456003 220 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 SNORA18.6-201ENST00000516792 115 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 RNU6-176P-201ENST00000517196 105 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 TRAV15-201ENST00000556680 249 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 RN7SKP299-201ENST00000606679 301 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 RNU6-862P-201ENST00000362804 105 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 RNU6-737P-201ENST00000365370 107 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 Y_RNA.395-201ENST00000383945 109 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 RNU6-730P-201ENST00000383954 104 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 MIR942-201ENST00000401111 86 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 AL590623.1-201ENST00000427864 105 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 AC005297.2-201ENST00000450430 606 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 HSPE1P23-201ENST00000509838 286 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 SCARNA23-201ENST00000516060 130 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 TRAV11-201ENST00000539512 339 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 AC027288.2-201ENST00000553028 243 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 AC009163.5-201ENST00000575421 637 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 AC240442.1-201ENST00000616055 283 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 AC006065.5-201ENST00000623427 349 ntBASIC1.06□□□□□ -2.24
HMCN1Q96RW7 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
HMCN1Q96RW7 SNORA7.4-201ENST00000384249 137 ntBASIC1.05□□□□□ -2.24
HMCN1Q96RW7 MIR186-201ENST00000384988 86 ntBASIC1.05□□□□□ -2.24
HMCN1Q96RW7 RNA5SP229-201ENST00000410809 99 ntBASIC1.05□□□□□ -2.24
HMCN1Q96RW7 RNU6-1068P-201ENST00000410958 103 ntBASIC1.05□□□□□ -2.24
HMCN1Q96RW7 MCFD2P1-201ENST00000417812 300 ntBASIC1.05□□□□□ -2.24
HMCN1Q96RW7 AC098592.1-201ENST00000419352 333 ntBASIC1.05□□□□□ -2.24
HMCN1Q96RW7 PMCHL2-203ENST00000457791 237 ntBASIC1.05□□□□□ -2.24
HMCN1Q96RW7 RNU6-764P-201ENST00000516396 105 ntBASIC1.05□□□□□ -2.24
HMCN1Q96RW7 RNU6-1007P-201ENST00000516586 107 ntBASIC1.05□□□□□ -2.24
HMCN1Q96RW7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.05□□□□□ -2.24
HMCN1Q96RW7 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC1.05□□□□□ -2.24
HMCN1Q96RW7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
HMCN1Q96RW7 AC093010.3-201ENST00000570269 15214 ntBASIC1.05□□□□□ -2.24
HMCN1Q96RW7 RNU4-80P-201ENST00000363200 141 ntBASIC1.05□□□□□ -2.24
HMCN1Q96RW7 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
HMCN1Q96RW7 Y_RNA.581-201ENST00000391017 97 ntBASIC1.05□□□□□ -2.24
HMCN1Q96RW7 RN7SKP53-201ENST00000411337 315 ntBASIC1.05□□□□□ -2.24
HMCN1Q96RW7 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC1.05□□□□□ -2.24
HMCN1Q96RW7 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC1.05□□□□□ -2.24
HMCN1Q96RW7 RNU7-197P-201ENST00000458836 62 ntBASIC1.05□□□□□ -2.24
HMCN1Q96RW7 RN7SKP295-201ENST00000517264 153 ntBASIC1.05□□□□□ -2.24
HMCN1Q96RW7 RNU6-988P-201ENST00000519081 107 ntBASIC1.05□□□□□ -2.24
HMCN1Q96RW7 AC079600.2-201ENST00000550076 130 ntBASIC1.05□□□□□ -2.24
HMCN1Q96RW7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.05□□□□□ -2.24
HMCN1Q96RW7 AL132765.2-201ENST00000610812 351 ntBASIC1.05□□□□□ -2.24
HMCN1Q96RW7 AL603758.1-201ENST00000618654 241 ntBASIC1.05□□□□□ -2.24
HMCN1Q96RW7 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC1.05□□□□□ -2.24
HMCN1Q96RW7 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms