Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 AP001781.1-201ENST00000530977 207 ntBASIC3.44□□□□□ -1.86
CITED4Q96RK1 MIR4425-201ENST00000580572 84 ntBASIC3.44□□□□□ -1.86
CITED4Q96RK1 MIR3939-201ENST00000582614 106 ntBASIC3.44□□□□□ -1.86
CITED4Q96RK1 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.44□□□□□ -1.86
CITED4Q96RK1 AP005019.3-201ENST00000620418 560 ntBASIC3.44□□□□□ -1.86
CITED4Q96RK1 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CITED4Q96RK1 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CITED4Q96RK1 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CITED4Q96RK1 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CITED4Q96RK1 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.43□□□□□ -1.86
CITED4Q96RK1 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CITED4Q96RK1 AL021368.2-201ENST00000606125 5352 ntBASIC3.43□□□□□ -1.86
CITED4Q96RK1 RNU6-818P-201ENST00000364837 108 ntBASIC3.43□□□□□ -1.86
CITED4Q96RK1 MIR23B-201ENST00000384832 97 ntBASIC3.43□□□□□ -1.86
CITED4Q96RK1 MIR659-201ENST00000384963 97 ntBASIC3.43□□□□□ -1.86
CITED4Q96RK1 SNORA48.8-201ENST00000391324 134 ntBASIC3.43□□□□□ -1.86
CITED4Q96RK1 RNU6-1186P-201ENST00000410429 97 ntBASIC3.43□□□□□ -1.86
CITED4Q96RK1 Y_RNA.622-201ENST00000411091 108 ntBASIC3.43□□□□□ -1.86
CITED4Q96RK1 AL162725.1-201ENST00000435405 301 ntBASIC3.43□□□□□ -1.86
CITED4Q96RK1 RPS29P31-201ENST00000446147 164 ntBASIC3.43□□□□□ -1.86
CITED4Q96RK1 EEF1B2P7-201ENST00000451177 676 ntBASIC3.43□□□□□ -1.86
CITED4Q96RK1 AP001486.1-201ENST00000463339 476 ntBASIC3.43□□□□□ -1.86
CITED4Q96RK1 RNU6-561P-201ENST00000516222 102 ntBASIC3.43□□□□□ -1.86
CITED4Q96RK1 MIR2116-201ENST00000517221 80 ntBASIC3.43□□□□□ -1.86
CITED4Q96RK1 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CITED4Q96RK1 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.43□□□□□ -1.86
CITED4Q96RK1 VN1R85P-201ENST00000601587 426 ntBASIC3.43□□□□□ -1.86
CITED4Q96RK1 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
CITED4Q96RK1 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CITED4Q96RK1 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.42□□□□□ -1.86
CITED4Q96RK1 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CITED4Q96RK1 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.42□□□□□ -1.86
CITED4Q96RK1 RNU6-199P-201ENST00000362954 107 ntBASIC3.42□□□□□ -1.86
CITED4Q96RK1 SNORA71.2-201ENST00000364941 134 ntBASIC3.42□□□□□ -1.86
CITED4Q96RK1 Y_RNA.337-201ENST00000365312 102 ntBASIC3.42□□□□□ -1.86
CITED4Q96RK1 SNORD50.2-201ENST00000365465 70 ntBASIC3.42□□□□□ -1.86
CITED4Q96RK1 SNORA70C-201ENST00000384538 135 ntBASIC3.42□□□□□ -1.86
CITED4Q96RK1 MIR592-201ENST00000384959 97 ntBASIC3.42□□□□□ -1.86
CITED4Q96RK1 SNORD37.2-201ENST00000391075 66 ntBASIC3.42□□□□□ -1.86
CITED4Q96RK1 Y_RNA.587-201ENST00000391210 103 ntBASIC3.42□□□□□ -1.86
CITED4Q96RK1 AL512604.1-201ENST00000404812 257 ntBASIC3.42□□□□□ -1.86
CITED4Q96RK1 RNU2-48P-201ENST00000410694 191 ntBASIC3.42□□□□□ -1.86
CITED4Q96RK1 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.42□□□□□ -1.86
CITED4Q96RK1 AL139247.1-201ENST00000422768 325 ntBASIC3.42□□□□□ -1.86
CITED4Q96RK1 AC003685.2-201ENST00000422795 395 ntBASIC3.42□□□□□ -1.86
CITED4Q96RK1 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.42□□□□□ -1.86
CITED4Q96RK1 AC012671.1-201ENST00000451912 203 ntBASIC3.42□□□□□ -1.86
CITED4Q96RK1 AL133162.1-201ENST00000463228 453 ntBASIC3.42□□□□□ -1.86
CITED4Q96RK1 AC006483.1-201ENST00000487308 313 ntBASIC3.42□□□□□ -1.86
CITED4Q96RK1 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.42□□□□□ -1.86
CITED4Q96RK1 AC104619.4-201ENST00000510773 249 ntBASIC3.42□□□□□ -1.86
CITED4Q96RK1 AC097462.1-201ENST00000514125 324 ntBASIC3.42□□□□□ -1.86
CITED4Q96RK1 RNU6-1146P-201ENST00000516282 102 ntBASIC3.42□□□□□ -1.86
CITED4Q96RK1 RN7SKP83-201ENST00000516512 178 ntBASIC3.42□□□□□ -1.86
CITED4Q96RK1 MIR3616-201ENST00000584070 92 ntBASIC3.42□□□□□ -1.86
CITED4Q96RK1 AL031274.2-201ENST00000599419 203 ntBASIC3.42□□□□□ -1.86
CITED4Q96RK1 AC034229.5-201ENST00000624258 185 ntBASIC3.42□□□□□ -1.86
CITED4Q96RK1 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.42□□□□□ -1.86
CITED4Q96RK1 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.42□□□□□ -1.86
CITED4Q96RK1 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CITED4Q96RK1 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.41□□□□□ -1.86
CITED4Q96RK1 RNU1-22P-201ENST00000363334 158 ntBASIC3.41□□□□□ -1.86
CITED4Q96RK1 RNU6-417P-201ENST00000384712 107 ntBASIC3.41□□□□□ -1.86
CITED4Q96RK1 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.41□□□□□ -1.86
CITED4Q96RK1 Z98745.1-201ENST00000402553 494 ntBASIC3.41□□□□□ -1.86
CITED4Q96RK1 MIR1278-201ENST00000408753 81 ntBASIC3.41□□□□□ -1.86
CITED4Q96RK1 Y_RNA.621-201ENST00000411065 96 ntBASIC3.41□□□□□ -1.86
CITED4Q96RK1 AC060773.1-201ENST00000421698 310 ntBASIC3.41□□□□□ -1.86
CITED4Q96RK1 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.41□□□□□ -1.86
CITED4Q96RK1 NDUFB9P3-201ENST00000521269 501 ntBASIC3.41□□□□□ -1.86
CITED4Q96RK1 AC008011.1-201ENST00000545989 227 ntBASIC3.41□□□□□ -1.86
CITED4Q96RK1 AC090877.1-201ENST00000561418 344 ntBASIC3.41□□□□□ -1.86
CITED4Q96RK1 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.41□□□□□ -1.86
CITED4Q96RK1 AL606490.9-201ENST00000603331 271 ntBASIC3.41□□□□□ -1.86
CITED4Q96RK1 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.41□□□□□ -1.86
CITED4Q96RK1 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.41□□□□□ -1.86
CITED4Q96RK1 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CITED4Q96RK1 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
CITED4Q96RK1 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.86
CITED4Q96RK1 RNU4-11P-201ENST00000365287 132 ntBASIC3.4□□□□□ -1.87
CITED4Q96RK1 RNU6-117P-201ENST00000365415 107 ntBASIC3.4□□□□□ -1.87
CITED4Q96RK1 SNORA25B-201ENST00000365507 128 ntBASIC3.4□□□□□ -1.87
CITED4Q96RK1 SNORA72-201ENST00000384339 132 ntBASIC3.4□□□□□ -1.87
CITED4Q96RK1 Y_RNA.521-201ENST00000384560 114 ntBASIC3.4□□□□□ -1.87
CITED4Q96RK1 AL445687.1-201ENST00000439946 251 ntBASIC3.4□□□□□ -1.87
CITED4Q96RK1 AC009238.1-201ENST00000442165 424 ntBASIC3.4□□□□□ -1.87
CITED4Q96RK1 AC009237.6-201ENST00000446969 424 ntBASIC3.4□□□□□ -1.87
CITED4Q96RK1 CEP170P1-201ENST00000502249 4587 ntBASIC3.4□□□□□ -1.87
CITED4Q96RK1 RNA5SP272-201ENST00000516095 111 ntBASIC3.4□□□□□ -1.87
CITED4Q96RK1 RNU6-856P-201ENST00000516959 98 ntBASIC3.4□□□□□ -1.87
CITED4Q96RK1 AC025884.1-201ENST00000556034 378 ntBASIC3.4□□□□□ -1.87
CITED4Q96RK1 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.4□□□□□ -1.87
CITED4Q96RK1 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CITED4Q96RK1 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.4□□□□□ -1.87
CITED4Q96RK1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CITED4Q96RK1 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CITED4Q96RK1 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.39□□□□□ -1.87
CITED4Q96RK1 MFSD8-242ENST00000641690 4199 ntBASIC3.39□□□□□ -1.87
CITED4Q96RK1 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
CITED4Q96RK1 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms