Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 MIR3179-2-201ENST00000579107 84 ntBASIC-1.13□□□□□ -2.59
CFAP54Q96N23 MIR3179-3-201ENST00000579566 84 ntBASIC-1.13□□□□□ -2.59
CFAP54Q96N23 MIR3179-4-201ENST00000617599 84 ntBASIC-1.13□□□□□ -2.59
CFAP54Q96N23 AC106754.2-201ENST00000623006 233 ntBASIC-1.13□□□□□ -2.59
CFAP54Q96N23 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-1.13□□□□□ -2.59
CFAP54Q96N23 MTCO2P1-201ENST00000424648 477 ntBASIC-1.13□□□□□ -2.59
CFAP54Q96N23 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.13□□□□□ -2.59
CFAP54Q96N23 DEFB108D-201ENST00000527787 222 ntBASIC-1.13□□□□□ -2.59
CFAP54Q96N23 AC135803.1-201ENST00000608748 565 ntBASIC-1.13□□□□□ -2.59
CFAP54Q96N23 AL442067.1-201ENST00000613261 223 ntBASIC-1.13□□□□□ -2.59
CFAP54Q96N23 AL513423.1-201ENST00000621695 132 ntBASIC-1.13□□□□□ -2.59
CFAP54Q96N23 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-1.13□□□□□ -2.59
CFAP54Q96N23 MIR501-201ENST00000390204 84 ntBASIC-1.14□□□□□ -2.59
CFAP54Q96N23 RNU2-43P-201ENST00000410306 190 ntBASIC-1.14□□□□□ -2.59
CFAP54Q96N23 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.14□□□□□ -2.59
CFAP54Q96N23 RPL36P19-201ENST00000430744 301 ntBASIC-1.14□□□□□ -2.59
CFAP54Q96N23 AC133485.4-201ENST00000561835 220 ntBASIC-1.14□□□□□ -2.59
CFAP54Q96N23 MIR4520-1-201ENST00000582609 70 ntBASIC-1.14□□□□□ -2.59
CFAP54Q96N23 ZNF204P-201ENST00000416749 2397 ntBASIC-1.14□□□□□ -2.59
CFAP54Q96N23 MTCYBP38-201ENST00000417160 1123 ntBASIC-1.14□□□□□ -2.59
CFAP54Q96N23 USP9YP22-201ENST00000438971 294 ntBASIC-1.14□□□□□ -2.59
CFAP54Q96N23 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.14□□□□□ -2.59
CFAP54Q96N23 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-1.14□□□□□ -2.59
CFAP54Q96N23 AC022137.1-201ENST00000483735 151 ntBASIC-1.14□□□□□ -2.59
CFAP54Q96N23 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC-1.14□□□□□ -2.59
CFAP54Q96N23 MTCYBP43-201ENST00000513621 740 ntBASIC-1.14□□□□□ -2.59
CFAP54Q96N23 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.14□□□□□ -2.59
CFAP54Q96N23 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.14□□□□□ -2.59
CFAP54Q96N23 DEFB131D-201ENST00000526803 184 ntBASIC-1.14□□□□□ -2.59
CFAP54Q96N23 DEFB131C-201ENST00000528817 165 ntBASIC-1.14□□□□□ -2.59
CFAP54Q96N23 U6.99-201ENST00000637524 83 ntBASIC-1.14□□□□□ -2.59
CFAP54Q96N23 RNU4-28P-201ENST00000364739 141 ntBASIC-1.14□□□□□ -2.59
CFAP54Q96N23 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.14□□□□□ -2.59
CFAP54Q96N23 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.14□□□□□ -2.59
CFAP54Q96N23 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-1.14□□□□□ -2.59
CFAP54Q96N23 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-1.14□□□□□ -2.59
CFAP54Q96N23 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.14□□□□□ -2.59
CFAP54Q96N23 AC093259.1-201ENST00000509755 300 ntBASIC-1.14□□□□□ -2.59
CFAP54Q96N23 HSPE1P23-201ENST00000509838 286 ntBASIC-1.14□□□□□ -2.59
CFAP54Q96N23 AC013828.2-201ENST00000532487 235 ntBASIC-1.14□□□□□ -2.59
CFAP54Q96N23 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC-1.14□□□□□ -2.59
CFAP54Q96N23 AC010615.3-201ENST00000597319 394 ntBASIC-1.14□□□□□ -2.59
CFAP54Q96N23 NEAT1_2.1-201ENST00000620525 105 ntBASIC-1.14□□□□□ -2.59
CFAP54Q96N23 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.15□□□□□ -2.59
CFAP54Q96N23 RNU6-1243P-201ENST00000364028 107 ntBASIC-1.15□□□□□ -2.59
CFAP54Q96N23 RNU6-1274P-201ENST00000384557 107 ntBASIC-1.15□□□□□ -2.59
CFAP54Q96N23 AL357139.1-201ENST00000407792 426 ntBASIC-1.15□□□□□ -2.59
CFAP54Q96N23 MTND1P30-201ENST00000441241 901 ntBASIC-1.15□□□□□ -2.59
CFAP54Q96N23 AP002802.2-201ENST00000605877 235 ntBASIC-1.15□□□□□ -2.59
CFAP54Q96N23 MIR660-201ENST00000385235 97 ntBASIC-1.15□□□□□ -2.59
CFAP54Q96N23 YWHAZP8-201ENST00000436935 731 ntBASIC-1.15□□□□□ -2.59
CFAP54Q96N23 MTCYBP40-201ENST00000509390 1135 ntBASIC-1.15□□□□□ -2.59
CFAP54Q96N23 MIR4771-2-201ENST00000577758 74 ntBASIC-1.15□□□□□ -2.59
CFAP54Q96N23 MIR4771-1-201ENST00000582617 74 ntBASIC-1.15□□□□□ -2.59
CFAP54Q96N23 U2.21-201ENST00000637295 81 ntBASIC-1.15□□□□□ -2.59
CFAP54Q96N23 RNU6-705P-201ENST00000410601 104 ntBASIC-1.16□□□□□ -2.59
CFAP54Q96N23 MTCO2P23-201ENST00000425216 680 ntBASIC-1.16□□□□□ -2.59
CFAP54Q96N23 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC-1.16□□□□□ -2.59
CFAP54Q96N23 SNORD111.1-201ENST00000516421 86 ntBASIC-1.16□□□□□ -2.59
CFAP54Q96N23 AP001429.1-201ENST00000602568 530 ntBASIC-1.16□□□□□ -2.59
CFAP54Q96N23 AKIRIN2P1-201ENST00000505898 352 ntBASIC-1.16□□□□□ -2.6
CFAP54Q96N23 RNU2-46P-201ENST00000517038 113 ntBASIC-1.16□□□□□ -2.6
CFAP54Q96N23 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC-1.16□□□□□ -2.6
CFAP54Q96N23 MIR4504-201ENST00000577413 92 ntBASIC-1.16□□□□□ -2.6
CFAP54Q96N23 PRRC2CP1-201ENST00000404428 159 ntBASIC-1.17□□□□□ -2.6
CFAP54Q96N23 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-1.17□□□□□ -2.6
CFAP54Q96N23 AL512326.2-201ENST00000426359 151 ntBASIC-1.17□□□□□ -2.6
CFAP54Q96N23 RPL39P34-201ENST00000477141 156 ntBASIC-1.17□□□□□ -2.6
CFAP54Q96N23 AC104383.1-201ENST00000530297 370 ntBASIC-1.17□□□□□ -2.6
CFAP54Q96N23 MIR6851-201ENST00000617060 67 ntBASIC-1.17□□□□□ -2.6
CFAP54Q96N23 U8.6-201ENST00000364939 135 ntBASIC-1.17□□□□□ -2.6
CFAP54Q96N23 RNU6-652P-201ENST00000365488 107 ntBASIC-1.17□□□□□ -2.6
CFAP54Q96N23 MTND4LP10-201ENST00000435146 291 ntBASIC-1.17□□□□□ -2.6
CFAP54Q96N23 MIR6502-201ENST00000617296 76 ntBASIC-1.17□□□□□ -2.6
CFAP54Q96N23 SCARNA4-201ENST00000629045 128 ntBASIC-1.17□□□□□ -2.6
CFAP54Q96N23 MIR487A-201ENST00000385009 80 ntBASIC-1.17□□□□□ -2.6
CFAP54Q96N23 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-1.17□□□□□ -2.6
CFAP54Q96N23 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC-1.17□□□□□ -2.6
CFAP54Q96N23 USP9YP16-201ENST00000430287 407 ntBASIC-1.17□□□□□ -2.6
CFAP54Q96N23 AC004223.4-201ENST00000612426 332 ntBASIC-1.17□□□□□ -2.6
CFAP54Q96N23 MIR1248-201ENST00000629190 106 ntBASIC-1.17□□□□□ -2.6
CFAP54Q96N23 MIR382-201ENST00000637119 76 ntBASIC-1.17□□□□□ -2.6
CFAP54Q96N23 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.18□□□□□ -2.6
CFAP54Q96N23 RNU6-1331P-201ENST00000363658 106 ntBASIC-1.18□□□□□ -2.6
CFAP54Q96N23 SNORA63C-201ENST00000364578 129 ntBASIC-1.18□□□□□ -2.6
CFAP54Q96N23 RNU6-447P-201ENST00000410293 104 ntBASIC-1.18□□□□□ -2.6
CFAP54Q96N23 RNU6-1118P-201ENST00000410382 104 ntBASIC-1.18□□□□□ -2.6
CFAP54Q96N23 RNU6-1076P-201ENST00000410397 104 ntBASIC-1.18□□□□□ -2.6
CFAP54Q96N23 RNU6-355P-201ENST00000410427 104 ntBASIC-1.18□□□□□ -2.6
CFAP54Q96N23 RNU6-791P-201ENST00000410467 104 ntBASIC-1.18□□□□□ -2.6
CFAP54Q96N23 RNU6-1100P-201ENST00000410691 104 ntBASIC-1.18□□□□□ -2.6
CFAP54Q96N23 RNU6-860P-201ENST00000410860 104 ntBASIC-1.18□□□□□ -2.6
CFAP54Q96N23 RNU6-1217P-201ENST00000411276 104 ntBASIC-1.18□□□□□ -2.6
CFAP54Q96N23 RNU6-785P-201ENST00000411324 104 ntBASIC-1.18□□□□□ -2.6
CFAP54Q96N23 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-1.18□□□□□ -2.6
CFAP54Q96N23 MIR4804-201ENST00000581683 73 ntBASIC-1.18□□□□□ -2.6
CFAP54Q96N23 U6.90-201ENST00000614007 104 ntBASIC-1.18□□□□□ -2.6
CFAP54Q96N23 U6.70-201ENST00000620287 104 ntBASIC-1.18□□□□□ -2.6
CFAP54Q96N23 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-1.18□□□□□ -2.6
CFAP54Q96N23 RNU6-228P-201ENST00000362700 106 ntBASIC-1.18□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms