Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RRN3P3-201ENST00000549207 578 ntBASIC2.62□□□□□ -1.99
VPS50Q96JG6 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.62□□□□□ -1.99
VPS50Q96JG6 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.62□□□□□ -1.99
VPS50Q96JG6 ZNF861P-201ENST00000588126 639 ntBASIC2.62□□□□□ -1.99
VPS50Q96JG6 AC005562.2-201ENST00000618264 111 ntBASIC2.62□□□□□ -1.99
VPS50Q96JG6 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VPS50Q96JG6 Y_RNA.143-201ENST00000363520 106 ntBASIC2.61□□□□□ -1.99
VPS50Q96JG6 Y_RNA.176-201ENST00000363815 109 ntBASIC2.61□□□□□ -1.99
VPS50Q96JG6 RNU6-961P-201ENST00000363893 105 ntBASIC2.61□□□□□ -1.99
VPS50Q96JG6 SNORA67.1-201ENST00000364749 141 ntBASIC2.61□□□□□ -1.99
VPS50Q96JG6 RNU6-463P-201ENST00000384340 107 ntBASIC2.61□□□□□ -1.99
VPS50Q96JG6 MIR29B2-201ENST00000385055 81 ntBASIC2.61□□□□□ -1.99
VPS50Q96JG6 AL138827.1-201ENST00000402666 306 ntBASIC2.61□□□□□ -1.99
VPS50Q96JG6 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.61□□□□□ -1.99
VPS50Q96JG6 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS50Q96JG6 RPL26P26-201ENST00000480251 434 ntBASIC2.61□□□□□ -1.99
VPS50Q96JG6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS50Q96JG6 RNU2-44P-201ENST00000516795 194 ntBASIC2.61□□□□□ -1.99
VPS50Q96JG6 RNU6-586P-201ENST00000517265 104 ntBASIC2.61□□□□□ -1.99
VPS50Q96JG6 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS50Q96JG6 AC136932.1-201ENST00000574771 208 ntBASIC2.61□□□□□ -1.99
VPS50Q96JG6 MIR4319-201ENST00000577285 85 ntBASIC2.61□□□□□ -1.99
VPS50Q96JG6 PRR13P7-201ENST00000605538 430 ntBASIC2.61□□□□□ -1.99
VPS50Q96JG6 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.61□□□□□ -1.99
VPS50Q96JG6 AC010205.1-201ENST00000616668 449 ntBASIC2.61□□□□□ -1.99
VPS50Q96JG6 MIR203B-201ENST00000636080 86 ntBASIC2.61□□□□□ -1.99
VPS50Q96JG6 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VPS50Q96JG6 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VPS50Q96JG6 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.6□□□□□ -1.99
VPS50Q96JG6 MTND5P35-201ENST00000557537 1720 ntBASIC2.6□□□□□ -1.99
VPS50Q96JG6 Y_RNA.19-201ENST00000362462 99 ntBASIC2.6□□□□□ -1.99
VPS50Q96JG6 Y_RNA.149-201ENST00000363558 117 ntBASIC2.6□□□□□ -1.99
VPS50Q96JG6 Y_RNA.152-201ENST00000363578 100 ntBASIC2.6□□□□□ -1.99
VPS50Q96JG6 Y_RNA.179-201ENST00000363844 90 ntBASIC2.6□□□□□ -1.99
VPS50Q96JG6 RNU6-770P-201ENST00000363929 105 ntBASIC2.6□□□□□ -1.99
VPS50Q96JG6 RNU6-611P-201ENST00000384276 104 ntBASIC2.6□□□□□ -1.99
VPS50Q96JG6 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.6□□□□□ -1.99
VPS50Q96JG6 SNORD109B-201ENST00000458961 67 ntBASIC2.6□□□□□ -1.99
VPS50Q96JG6 SNORD109A-201ENST00000459128 67 ntBASIC2.6□□□□□ -1.99
VPS50Q96JG6 AC080013.2-201ENST00000460866 323 ntBASIC2.6□□□□□ -1.99
VPS50Q96JG6 AC098869.1-201ENST00000481627 292 ntBASIC2.6□□□□□ -1.99
VPS50Q96JG6 AC079600.2-201ENST00000550076 130 ntBASIC2.6□□□□□ -1.99
VPS50Q96JG6 MIR5006-201ENST00000583027 110 ntBASIC2.6□□□□□ -1.99
VPS50Q96JG6 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
VPS50Q96JG6 SNRPGP20-201ENST00000604477 205 ntBASIC2.6□□□□□ -1.99
VPS50Q96JG6 AL033523.1-201ENST00000605153 153 ntBASIC2.6□□□□□ -1.99
VPS50Q96JG6 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.6□□□□□ -1.99
VPS50Q96JG6 7SK.10-201ENST00000621414 298 ntBASIC2.6□□□□□ -1.99
VPS50Q96JG6 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.6□□□□□ -1.99
VPS50Q96JG6 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
VPS50Q96JG6 AL136360.1-201ENST00000503377 1900 ntBASIC2.6□□□□□ -1.99
VPS50Q96JG6 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
VPS50Q96JG6 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
VPS50Q96JG6 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.59□□□□□ -1.99
VPS50Q96JG6 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
VPS50Q96JG6 AC062016.1-201ENST00000355719 319 ntBASIC2.59□□□□□ -1.99
VPS50Q96JG6 RNU1-23P-201ENST00000363361 144 ntBASIC2.59□□□□□ -1.99
VPS50Q96JG6 Y_RNA.415-201ENST00000384012 112 ntBASIC2.59□□□□□ -1.99
VPS50Q96JG6 RNU6-245P-201ENST00000384020 107 ntBASIC2.59□□□□□ -1.99
VPS50Q96JG6 SNORA18.3-201ENST00000384122 132 ntBASIC2.59□□□□□ -1.99
VPS50Q96JG6 RNU6-196P-201ENST00000384315 107 ntBASIC2.59□□□□□ -1.99
VPS50Q96JG6 AL033519.2-201ENST00000403958 392 ntBASIC2.59□□□□□ -1.99
VPS50Q96JG6 RPL21P38-201ENST00000418090 167 ntBASIC2.59□□□□□ -1.99
VPS50Q96JG6 AC011753.1-201ENST00000451001 220 ntBASIC2.59□□□□□ -1.99
VPS50Q96JG6 EEF1B2P7-201ENST00000451177 676 ntBASIC2.59□□□□□ -1.99
VPS50Q96JG6 LINC01399-202ENST00000458450 244 ntBASIC2.59□□□□□ -1.99
VPS50Q96JG6 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.59□□□□□ -1.99
VPS50Q96JG6 SNORA40.9-201ENST00000515895 93 ntBASIC2.59□□□□□ -1.99
VPS50Q96JG6 RNU6-408P-201ENST00000515910 100 ntBASIC2.59□□□□□ -1.99
VPS50Q96JG6 Y_RNA.683-201ENST00000516508 93 ntBASIC2.59□□□□□ -1.99
VPS50Q96JG6 RNU6-965P-201ENST00000516721 96 ntBASIC2.59□□□□□ -1.99
VPS50Q96JG6 RNU6-1098P-201ENST00000516772 96 ntBASIC2.59□□□□□ -1.99
VPS50Q96JG6 SNORA40.15-201ENST00000516884 107 ntBASIC2.59□□□□□ -1.99
VPS50Q96JG6 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.59□□□□□ -1.99
VPS50Q96JG6 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.59□□□□□ -1.99
VPS50Q96JG6 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.59□□□□□ -1.99
VPS50Q96JG6 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.59□□□□□ -1.99
VPS50Q96JG6 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
VPS50Q96JG6 Y_RNA.183-201ENST00000363882 113 ntBASIC2.58□□□□□ -2
VPS50Q96JG6 Y_RNA.439-201ENST00000384119 94 ntBASIC2.58□□□□□ -2
VPS50Q96JG6 RNU1-52P-201ENST00000384190 164 ntBASIC2.58□□□□□ -2
VPS50Q96JG6 RNU6-793P-201ENST00000384233 104 ntBASIC2.58□□□□□ -2
VPS50Q96JG6 RNU6-937P-201ENST00000384325 106 ntBASIC2.58□□□□□ -2
VPS50Q96JG6 MIR524-201ENST00000385242 87 ntBASIC2.58□□□□□ -2
VPS50Q96JG6 RNA5SP504-201ENST00000410676 117 ntBASIC2.58□□□□□ -2
VPS50Q96JG6 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.58□□□□□ -2
VPS50Q96JG6 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.58□□□□□ -2
VPS50Q96JG6 MYL12BP1-201ENST00000569826 507 ntBASIC2.58□□□□□ -2
VPS50Q96JG6 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.58□□□□□ -2
VPS50Q96JG6 AC055872.1-201ENST00000570978 278 ntBASIC2.58□□□□□ -2
VPS50Q96JG6 MIR4435-1-201ENST00000582552 80 ntBASIC2.58□□□□□ -2
VPS50Q96JG6 TCL6_2.1-201ENST00000615162 119 ntBASIC2.58□□□□□ -2
VPS50Q96JG6 AC130454.1-201ENST00000622948 401 ntBASIC2.58□□□□□ -2
VPS50Q96JG6 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.58□□□□□ -2
VPS50Q96JG6 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.58□□□□□ -2
VPS50Q96JG6 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.58□□□□□ -2
VPS50Q96JG6 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
VPS50Q96JG6 RNU1-62P-201ENST00000362599 164 ntBASIC2.57□□□□□ -2
VPS50Q96JG6 Y_RNA.276-201ENST00000364732 109 ntBASIC2.57□□□□□ -2
VPS50Q96JG6 SNORD87-201ENST00000364849 89 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 204.9 ms