Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AL033519.2-201ENST00000403958 392 ntBASIC2.8□□□□□ -1.96
CDK5RAP3Q96JB5 Y_RNA.595-201ENST00000410403 105 ntBASIC2.8□□□□□ -1.96
CDK5RAP3Q96JB5 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.8□□□□□ -1.96
CDK5RAP3Q96JB5 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.8□□□□□ -1.96
CDK5RAP3Q96JB5 SDAD1P3-201ENST00000427380 333 ntBASIC2.8□□□□□ -1.96
CDK5RAP3Q96JB5 AC009237.7-201ENST00000447357 229 ntBASIC2.8□□□□□ -1.96
CDK5RAP3Q96JB5 AC108938.1-201ENST00000451204 136 ntBASIC2.8□□□□□ -1.96
CDK5RAP3Q96JB5 MTATP8P1-201ENST00000467115 207 ntBASIC2.8□□□□□ -1.96
CDK5RAP3Q96JB5 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.8□□□□□ -1.96
CDK5RAP3Q96JB5 MYL12BP1-201ENST00000569826 507 ntBASIC2.8□□□□□ -1.96
CDK5RAP3Q96JB5 MIR4659A-201ENST00000580269 81 ntBASIC2.8□□□□□ -1.96
CDK5RAP3Q96JB5 AL121655.1-201ENST00000605811 308 ntBASIC2.8□□□□□ -1.96
CDK5RAP3Q96JB5 AC011476.5-201ENST00000615594 130 ntBASIC2.8□□□□□ -1.96
CDK5RAP3Q96JB5 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CDK5RAP3Q96JB5 Z82209.1-201ENST00000422141 2135 ntBASIC2.8□□□□□ -1.96
CDK5RAP3Q96JB5 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CDK5RAP3Q96JB5 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CDK5RAP3Q96JB5 RNU6-234P-201ENST00000365229 104 ntBASIC2.79□□□□□ -1.96
CDK5RAP3Q96JB5 SNORA63.7-201ENST00000365579 123 ntBASIC2.79□□□□□ -1.96
CDK5RAP3Q96JB5 Y_RNA.458-201ENST00000384240 102 ntBASIC2.79□□□□□ -1.96
CDK5RAP3Q96JB5 MIR524-201ENST00000385242 87 ntBASIC2.79□□□□□ -1.96
CDK5RAP3Q96JB5 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.79□□□□□ -1.96
CDK5RAP3Q96JB5 RPS12P2-201ENST00000439728 269 ntBASIC2.79□□□□□ -1.96
CDK5RAP3Q96JB5 RNU6-397P-201ENST00000516226 104 ntBASIC2.79□□□□□ -1.96
CDK5RAP3Q96JB5 RNA5SP320-201ENST00000516263 124 ntBASIC2.79□□□□□ -1.96
CDK5RAP3Q96JB5 RNU6-1012P-201ENST00000516606 109 ntBASIC2.79□□□□□ -1.96
CDK5RAP3Q96JB5 RNU1-117P-201ENST00000517041 158 ntBASIC2.79□□□□□ -1.96
CDK5RAP3Q96JB5 AC034114.1-201ENST00000520293 285 ntBASIC2.79□□□□□ -1.96
CDK5RAP3Q96JB5 AC131281.1-201ENST00000522984 164 ntBASIC2.79□□□□□ -1.96
CDK5RAP3Q96JB5 AC022616.8-201ENST00000533569 253 ntBASIC2.79□□□□□ -1.96
CDK5RAP3Q96JB5 AL355297.3-201ENST00000604082 446 ntBASIC2.79□□□□□ -1.96
CDK5RAP3Q96JB5 MIR6817-201ENST00000615588 66 ntBASIC2.79□□□□□ -1.96
CDK5RAP3Q96JB5 U4.3-201ENST00000621047 82 ntBASIC2.79□□□□□ -1.96
CDK5RAP3Q96JB5 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.78□□□□□ -1.96
CDK5RAP3Q96JB5 RNA5SP456-201ENST00000364002 114 ntBASIC2.78□□□□□ -1.96
CDK5RAP3Q96JB5 RNU6-743P-201ENST00000364151 106 ntBASIC2.78□□□□□ -1.96
CDK5RAP3Q96JB5 Y_RNA.210-201ENST00000364161 110 ntBASIC2.78□□□□□ -1.96
CDK5RAP3Q96JB5 RNU1-91P-201ENST00000364746 163 ntBASIC2.78□□□□□ -1.96
CDK5RAP3Q96JB5 DEFA7P-201ENST00000382676 285 ntBASIC2.78□□□□□ -1.96
CDK5RAP3Q96JB5 MIR561-201ENST00000385216 97 ntBASIC2.78□□□□□ -1.96
CDK5RAP3Q96JB5 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.78□□□□□ -1.96
CDK5RAP3Q96JB5 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.78□□□□□ -1.96
CDK5RAP3Q96JB5 RPEP5-201ENST00000441137 268 ntBASIC2.78□□□□□ -1.96
CDK5RAP3Q96JB5 IFNA11P-201ENST00000446352 526 ntBASIC2.78□□□□□ -1.96
CDK5RAP3Q96JB5 FCF1P4-201ENST00000448326 183 ntBASIC2.78□□□□□ -1.96
CDK5RAP3Q96JB5 PCNPP5-201ENST00000452246 481 ntBASIC2.78□□□□□ -1.96
CDK5RAP3Q96JB5 RNU7-14P-201ENST00000459331 62 ntBASIC2.78□□□□□ -1.96
CDK5RAP3Q96JB5 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.78□□□□□ -1.96
CDK5RAP3Q96JB5 AL049873.1-201ENST00000480540 376 ntBASIC2.78□□□□□ -1.96
CDK5RAP3Q96JB5 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.78□□□□□ -1.96
CDK5RAP3Q96JB5 RRN3P3-201ENST00000549207 578 ntBASIC2.78□□□□□ -1.96
CDK5RAP3Q96JB5 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.78□□□□□ -1.96
CDK5RAP3Q96JB5 AL021879.1-201ENST00000611756 288 ntBASIC2.78□□□□□ -1.96
CDK5RAP3Q96JB5 AL357075.2-201ENST00000614906 189 ntBASIC2.78□□□□□ -1.96
CDK5RAP3Q96JB5 AC240442.1-201ENST00000616055 283 ntBASIC2.78□□□□□ -1.96
CDK5RAP3Q96JB5 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.78□□□□□ -1.96
CDK5RAP3Q96JB5 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CDK5RAP3Q96JB5 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.97
CDK5RAP3Q96JB5 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.77□□□□□ -1.97
CDK5RAP3Q96JB5 Y_RNA.152-201ENST00000363578 100 ntBASIC2.77□□□□□ -1.97
CDK5RAP3Q96JB5 RNA5SP68-201ENST00000363885 119 ntBASIC2.77□□□□□ -1.97
CDK5RAP3Q96JB5 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.77□□□□□ -1.97
CDK5RAP3Q96JB5 AC009238.1-201ENST00000442165 424 ntBASIC2.77□□□□□ -1.97
CDK5RAP3Q96JB5 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.77□□□□□ -1.97
CDK5RAP3Q96JB5 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.77□□□□□ -1.97
CDK5RAP3Q96JB5 AC009237.6-201ENST00000446969 424 ntBASIC2.77□□□□□ -1.97
CDK5RAP3Q96JB5 UQCRBP2-201ENST00000447827 297 ntBASIC2.77□□□□□ -1.97
CDK5RAP3Q96JB5 AC011753.1-201ENST00000451001 220 ntBASIC2.77□□□□□ -1.97
CDK5RAP3Q96JB5 AC007395.1-201ENST00000451333 677 ntBASIC2.77□□□□□ -1.97
CDK5RAP3Q96JB5 AC010655.3-201ENST00000478818 450 ntBASIC2.77□□□□□ -1.97
CDK5RAP3Q96JB5 MRPS35P2-201ENST00000508242 191 ntBASIC2.77□□□□□ -1.97
CDK5RAP3Q96JB5 RNU6-344P-201ENST00000516635 111 ntBASIC2.77□□□□□ -1.97
CDK5RAP3Q96JB5 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
CDK5RAP3Q96JB5 RAC1P9-201ENST00000604990 392 ntBASIC2.77□□□□□ -1.97
CDK5RAP3Q96JB5 SNORD11B-201ENST00000607707 90 ntBASIC2.77□□□□□ -1.97
CDK5RAP3Q96JB5 MIR6895-201ENST00000613497 78 ntBASIC2.77□□□□□ -1.97
CDK5RAP3Q96JB5 MIR1248-201ENST00000629190 106 ntBASIC2.77□□□□□ -1.97
CDK5RAP3Q96JB5 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.77□□□□□ -1.97
CDK5RAP3Q96JB5 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CDK5RAP3Q96JB5 SNORA3A-201ENST00000364113 130 ntBASIC2.76□□□□□ -1.97
CDK5RAP3Q96JB5 Y_RNA.415-201ENST00000384012 112 ntBASIC2.76□□□□□ -1.97
CDK5RAP3Q96JB5 RNU6-1026P-201ENST00000384465 108 ntBASIC2.76□□□□□ -1.97
CDK5RAP3Q96JB5 MIR144-201ENST00000384886 86 ntBASIC2.76□□□□□ -1.97
CDK5RAP3Q96JB5 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.76□□□□□ -1.97
CDK5RAP3Q96JB5 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.76□□□□□ -1.97
CDK5RAP3Q96JB5 HMGN1P10-201ENST00000474557 553 ntBASIC2.76□□□□□ -1.97
CDK5RAP3Q96JB5 AC067942.3-201ENST00000512025 362 ntBASIC2.76□□□□□ -1.97
CDK5RAP3Q96JB5 SNORA40.9-201ENST00000515895 93 ntBASIC2.76□□□□□ -1.97
CDK5RAP3Q96JB5 RNA5SP148-201ENST00000516527 94 ntBASIC2.76□□□□□ -1.97
CDK5RAP3Q96JB5 RNA5SP82-201ENST00000516707 92 ntBASIC2.76□□□□□ -1.97
CDK5RAP3Q96JB5 CYCSP23-201ENST00000519781 313 ntBASIC2.76□□□□□ -1.97
CDK5RAP3Q96JB5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.76□□□□□ -1.97
CDK5RAP3Q96JB5 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.76□□□□□ -1.97
CDK5RAP3Q96JB5 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.76□□□□□ -1.97
CDK5RAP3Q96JB5 AL162730.1-201ENST00000605734 292 ntBASIC2.76□□□□□ -1.97
CDK5RAP3Q96JB5 Y_RNA.772-201ENST00000606692 102 ntBASIC2.76□□□□□ -1.97
CDK5RAP3Q96JB5 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.76□□□□□ -1.97
CDK5RAP3Q96JB5 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
CDK5RAP3Q96JB5 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CDK5RAP3Q96JB5 Y_RNA.439-201ENST00000384119 94 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms