Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 RNU6-805P-201ENST00000365643 106 ntBASIC3.49□□□□□ -1.85
SHISA4Q96DD7 SNORA18.3-201ENST00000384122 132 ntBASIC3.49□□□□□ -1.85
SHISA4Q96DD7 SNORA70B-201ENST00000384210 135 ntBASIC3.49□□□□□ -1.85
SHISA4Q96DD7 SNORA46-201ENST00000384762 135 ntBASIC3.49□□□□□ -1.85
SHISA4Q96DD7 EI24P2-201ENST00000397776 1076 ntBASIC3.49□□□□□ -1.85
SHISA4Q96DD7 RNA5SP129-201ENST00000410276 118 ntBASIC3.49□□□□□ -1.85
SHISA4Q96DD7 AC003685.2-201ENST00000422795 395 ntBASIC3.49□□□□□ -1.85
SHISA4Q96DD7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.49□□□□□ -1.85
SHISA4Q96DD7 RNU6-426P-201ENST00000516464 97 ntBASIC3.49□□□□□ -1.85
SHISA4Q96DD7 SNORA31.16-201ENST00000516773 139 ntBASIC3.49□□□□□ -1.85
SHISA4Q96DD7 AC068657.1-201ENST00000520807 306 ntBASIC3.49□□□□□ -1.85
SHISA4Q96DD7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.49□□□□□ -1.85
SHISA4Q96DD7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.49□□□□□ -1.85
SHISA4Q96DD7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.49□□□□□ -1.85
SHISA4Q96DD7 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.49□□□□□ -1.85
SHISA4Q96DD7 MIR3136-201ENST00000583498 78 ntBASIC3.49□□□□□ -1.85
SHISA4Q96DD7 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.48□□□□□ -1.85
SHISA4Q96DD7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.48□□□□□ -1.85
SHISA4Q96DD7 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
SHISA4Q96DD7 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.48□□□□□ -1.85
SHISA4Q96DD7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
SHISA4Q96DD7 RNU6-799P-201ENST00000363567 107 ntBASIC3.48□□□□□ -1.85
SHISA4Q96DD7 RNU6-324P-201ENST00000363957 106 ntBASIC3.48□□□□□ -1.85
SHISA4Q96DD7 RNU6-275P-201ENST00000364910 107 ntBASIC3.48□□□□□ -1.85
SHISA4Q96DD7 Y_RNA.329-201ENST00000365209 107 ntBASIC3.48□□□□□ -1.85
SHISA4Q96DD7 RNU6-622P-201ENST00000384272 103 ntBASIC3.48□□□□□ -1.85
SHISA4Q96DD7 SNORD15B-201ENST00000384714 146 ntBASIC3.48□□□□□ -1.85
SHISA4Q96DD7 MIR208B-201ENST00000401172 77 ntBASIC3.48□□□□□ -1.85
SHISA4Q96DD7 EBAG9P1-201ENST00000418955 543 ntBASIC3.48□□□□□ -1.85
SHISA4Q96DD7 ARF4P2-201ENST00000430209 526 ntBASIC3.48□□□□□ -1.85
SHISA4Q96DD7 AC022018.1-201ENST00000430685 241 ntBASIC3.48□□□□□ -1.85
SHISA4Q96DD7 CR769767.1-201ENST00000436337 346 ntBASIC3.48□□□□□ -1.85
SHISA4Q96DD7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.48□□□□□ -1.85
SHISA4Q96DD7 Y_RNA.637-201ENST00000459424 114 ntBASIC3.48□□□□□ -1.85
SHISA4Q96DD7 RN7SL75P-201ENST00000461926 281 ntBASIC3.48□□□□□ -1.85
SHISA4Q96DD7 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.48□□□□□ -1.85
SHISA4Q96DD7 ACA59.2-201ENST00000517061 156 ntBASIC3.48□□□□□ -1.85
SHISA4Q96DD7 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.48□□□□□ -1.85
SHISA4Q96DD7 MIR548X2-201ENST00000579776 100 ntBASIC3.48□□□□□ -1.85
SHISA4Q96DD7 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SHISA4Q96DD7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHISA4Q96DD7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.47□□□□□ -1.85
SHISA4Q96DD7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHISA4Q96DD7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.47□□□□□ -1.85
SHISA4Q96DD7 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHISA4Q96DD7 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHISA4Q96DD7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHISA4Q96DD7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHISA4Q96DD7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHISA4Q96DD7 RNU6-727P-201ENST00000363592 107 ntBASIC3.47□□□□□ -1.85
SHISA4Q96DD7 RNU6-257P-201ENST00000410238 98 ntBASIC3.47□□□□□ -1.85
SHISA4Q96DD7 AC096649.2-201ENST00000416186 393 ntBASIC3.47□□□□□ -1.85
SHISA4Q96DD7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.47□□□□□ -1.85
SHISA4Q96DD7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.47□□□□□ -1.85
SHISA4Q96DD7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.47□□□□□ -1.85
SHISA4Q96DD7 MIR3690-201ENST00000580266 75 ntBASIC3.47□□□□□ -1.85
SHISA4Q96DD7 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.47□□□□□ -1.85
SHISA4Q96DD7 SNORD98-201ENST00000636377 67 ntBASIC3.47□□□□□ -1.85
SHISA4Q96DD7 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SHISA4Q96DD7 PWAR6-201ENST00000552334 4618 ntBASIC3.47□□□□□ -1.85
SHISA4Q96DD7 AC100821.1-201ENST00000523153 2479 ntBASIC3.47□□□□□ -1.85
SHISA4Q96DD7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHISA4Q96DD7 GABRG2-229ENST00000641017 3628 ntBASIC3.46□□□□□ -1.85
SHISA4Q96DD7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
SHISA4Q96DD7 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.46□□□□□ -1.85
SHISA4Q96DD7 MIR22-201ENST00000362190 85 ntBASIC3.46□□□□□ -1.86
SHISA4Q96DD7 MIR569-201ENST00000385228 96 ntBASIC3.46□□□□□ -1.86
SHISA4Q96DD7 MIR549A-201ENST00000385268 96 ntBASIC3.46□□□□□ -1.86
SHISA4Q96DD7 SNORA40-201ENST00000388090 126 ntBASIC3.46□□□□□ -1.86
SHISA4Q96DD7 MIR887-201ENST00000401258 79 ntBASIC3.46□□□□□ -1.86
SHISA4Q96DD7 U3.40-201ENST00000408706 208 ntBASIC3.46□□□□□ -1.86
SHISA4Q96DD7 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.46□□□□□ -1.86
SHISA4Q96DD7 BPY2DP-201ENST00000422208 265 ntBASIC3.46□□□□□ -1.86
SHISA4Q96DD7 AC063976.3-201ENST00000426849 329 ntBASIC3.46□□□□□ -1.86
SHISA4Q96DD7 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.46□□□□□ -1.86
SHISA4Q96DD7 RN7SL330P-201ENST00000469709 307 ntBASIC3.46□□□□□ -1.86
SHISA4Q96DD7 RPS29P20-201ENST00000489592 171 ntBASIC3.46□□□□□ -1.86
SHISA4Q96DD7 RN7SKP164-201ENST00000516138 266 ntBASIC3.46□□□□□ -1.86
SHISA4Q96DD7 RNU6-436P-201ENST00000516171 114 ntBASIC3.46□□□□□ -1.86
SHISA4Q96DD7 MIR3923-201ENST00000579521 83 ntBASIC3.46□□□□□ -1.86
SHISA4Q96DD7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.46□□□□□ -1.86
SHISA4Q96DD7 AC005520.5-201ENST00000613926 164 ntBASIC3.46□□□□□ -1.86
SHISA4Q96DD7 AL078604.3-201ENST00000615580 211 ntBASIC3.46□□□□□ -1.86
SHISA4Q96DD7 MIR3199-2-201ENST00000636243 86 ntBASIC3.46□□□□□ -1.86
SHISA4Q96DD7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SHISA4Q96DD7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SHISA4Q96DD7 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SHISA4Q96DD7 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.45□□□□□ -1.86
SHISA4Q96DD7 AC010332.2-201ENST00000613083 1904 ntBASIC3.45□□□□□ -1.86
SHISA4Q96DD7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
SHISA4Q96DD7 RNU6-103P-201ENST00000363686 107 ntBASIC3.45□□□□□ -1.86
SHISA4Q96DD7 RNU6-1264P-201ENST00000383891 107 ntBASIC3.45□□□□□ -1.86
SHISA4Q96DD7 MIR504-201ENST00000385065 83 ntBASIC3.45□□□□□ -1.86
SHISA4Q96DD7 RNU6-763P-201ENST00000390865 106 ntBASIC3.45□□□□□ -1.86
SHISA4Q96DD7 RPL21P3-201ENST00000395517 478 ntBASIC3.45□□□□□ -1.86
SHISA4Q96DD7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.45□□□□□ -1.86
SHISA4Q96DD7 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.45□□□□□ -1.86
SHISA4Q96DD7 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.45□□□□□ -1.86
SHISA4Q96DD7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.45□□□□□ -1.86
SHISA4Q96DD7 AC146507.2-201ENST00000460608 476 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 312.9 ms