Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 RNA5SP397-201ENST00000391323 118 ntBASIC3.99□□□□□ -1.77
HPS1Q92902 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.99□□□□□ -1.77
HPS1Q92902 AC004941.2-201ENST00000427009 228 ntBASIC3.99□□□□□ -1.77
HPS1Q92902 HMGN2P21-201ENST00000447764 270 ntBASIC3.99□□□□□ -1.77
HPS1Q92902 RPS27P22-201ENST00000478056 241 ntBASIC3.99□□□□□ -1.77
HPS1Q92902 RNU6-693P-201ENST00000516134 107 ntBASIC3.99□□□□□ -1.77
HPS1Q92902 TRAV8-5-201ENST00000537369 341 ntBASIC3.99□□□□□ -1.77
HPS1Q92902 MIR4715-201ENST00000584117 79 ntBASIC3.99□□□□□ -1.77
HPS1Q92902 AC112200.1-201ENST00000625015 234 ntBASIC3.99□□□□□ -1.77
HPS1Q92902 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.99□□□□□ -1.77
HPS1Q92902 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HPS1Q92902 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.99□□□□□ -1.77
HPS1Q92902 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.99□□□□□ -1.77
HPS1Q92902 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.99□□□□□ -1.77
HPS1Q92902 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
HPS1Q92902 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HPS1Q92902 MIR423-201ENST00000362201 94 ntBASIC3.98□□□□□ -1.77
HPS1Q92902 RNU1-22P-201ENST00000363334 158 ntBASIC3.98□□□□□ -1.77
HPS1Q92902 SNORA70.2-201ENST00000364506 135 ntBASIC3.98□□□□□ -1.77
HPS1Q92902 RNU1-133P-201ENST00000364867 167 ntBASIC3.98□□□□□ -1.77
HPS1Q92902 RNU6-1104P-201ENST00000384723 104 ntBASIC3.98□□□□□ -1.77
HPS1Q92902 MIR129-1-201ENST00000384972 72 ntBASIC3.98□□□□□ -1.77
HPS1Q92902 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HPS1Q92902 RNU6-750P-201ENST00000390946 107 ntBASIC3.98□□□□□ -1.77
HPS1Q92902 RNU6-644P-201ENST00000391155 98 ntBASIC3.98□□□□□ -1.77
HPS1Q92902 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.98□□□□□ -1.77
HPS1Q92902 TOMM20P2-201ENST00000540082 421 ntBASIC3.98□□□□□ -1.77
HPS1Q92902 HIGD1AP1-201ENST00000550979 275 ntBASIC3.98□□□□□ -1.77
HPS1Q92902 PARP1P2-201ENST00000556806 195 ntBASIC3.98□□□□□ -1.77
HPS1Q92902 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.98□□□□□ -1.77
HPS1Q92902 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.98□□□□□ -1.77
HPS1Q92902 MIR3117-201ENST00000584034 78 ntBASIC3.98□□□□□ -1.77
HPS1Q92902 AC008739.2-201ENST00000597006 317 ntBASIC3.98□□□□□ -1.77
HPS1Q92902 AL356218.2-201ENST00000605264 187 ntBASIC3.98□□□□□ -1.77
HPS1Q92902 MIR376A2-201ENST00000636782 80 ntBASIC3.98□□□□□ -1.77
HPS1Q92902 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
HPS1Q92902 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.98□□□□□ -1.77
HPS1Q92902 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
HPS1Q92902 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.98□□□□□ -1.77
HPS1Q92902 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HPS1Q92902 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.97□□□□□ -1.77
HPS1Q92902 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
HPS1Q92902 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
HPS1Q92902 RNU6-944P-201ENST00000364023 107 ntBASIC3.97□□□□□ -1.77
HPS1Q92902 SNORD116-22-201ENST00000384430 92 ntBASIC3.97□□□□□ -1.77
HPS1Q92902 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HPS1Q92902 RNU6-938P-201ENST00000411285 103 ntBASIC3.97□□□□□ -1.77
HPS1Q92902 AC023141.4-201ENST00000412031 328 ntBASIC3.97□□□□□ -1.77
HPS1Q92902 AC012671.1-201ENST00000451912 203 ntBASIC3.97□□□□□ -1.77
HPS1Q92902 RNU7-14P-201ENST00000459331 62 ntBASIC3.97□□□□□ -1.77
HPS1Q92902 Y_RNA.666-201ENST00000516187 112 ntBASIC3.97□□□□□ -1.77
HPS1Q92902 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.97□□□□□ -1.77
HPS1Q92902 AC093249.4-201ENST00000564755 259 ntBASIC3.97□□□□□ -1.77
HPS1Q92902 RNU1-30P-201ENST00000606575 163 ntBASIC3.97□□□□□ -1.77
HPS1Q92902 AC096577.2-201ENST00000611455 153 ntBASIC3.97□□□□□ -1.77
HPS1Q92902 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HPS1Q92902 AC091905.2-201ENST00000623143 306 ntBASIC3.97□□□□□ -1.77
HPS1Q92902 AC073308.1-201ENST00000623696 305 ntBASIC3.97□□□□□ -1.77
HPS1Q92902 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.97□□□□□ -1.77
HPS1Q92902 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HPS1Q92902 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
HPS1Q92902 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.97□□□□□ -1.77
HPS1Q92902 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HPS1Q92902 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
HPS1Q92902 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
HPS1Q92902 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HPS1Q92902 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.96□□□□□ -1.78
HPS1Q92902 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HPS1Q92902 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.96□□□□□ -1.78
HPS1Q92902 SNORA33-201ENST00000363664 130 ntBASIC3.96□□□□□ -1.78
HPS1Q92902 U8.17-201ENST00000391292 132 ntBASIC3.96□□□□□ -1.78
HPS1Q92902 Z98941.1-201ENST00000407764 100 ntBASIC3.96□□□□□ -1.78
HPS1Q92902 RNU6-402P-201ENST00000410678 103 ntBASIC3.96□□□□□ -1.78
HPS1Q92902 SNRPGP13-201ENST00000442212 177 ntBASIC3.96□□□□□ -1.78
HPS1Q92902 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.96□□□□□ -1.78
HPS1Q92902 RNU7-164P-201ENST00000459221 62 ntBASIC3.96□□□□□ -1.78
HPS1Q92902 AC025554.1-201ENST00000505641 188 ntBASIC3.96□□□□□ -1.78
HPS1Q92902 RNU6-162P-201ENST00000516228 103 ntBASIC3.96□□□□□ -1.78
HPS1Q92902 AC109329.2-201ENST00000519658 482 ntBASIC3.96□□□□□ -1.78
HPS1Q92902 AC068657.1-201ENST00000520807 306 ntBASIC3.96□□□□□ -1.78
HPS1Q92902 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.96□□□□□ -1.78
HPS1Q92902 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.96□□□□□ -1.78
HPS1Q92902 AC022655.2-201ENST00000577280 318 ntBASIC3.96□□□□□ -1.78
HPS1Q92902 MIR432-201ENST00000606207 94 ntBASIC3.96□□□□□ -1.78
HPS1Q92902 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
HPS1Q92902 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HPS1Q92902 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HPS1Q92902 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HPS1Q92902 FAM35CP-201ENST00000554755 2470 ntBASIC3.96□□□□□ -1.78
HPS1Q92902 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HPS1Q92902 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HPS1Q92902 RNU6-170P-201ENST00000362832 104 ntBASIC3.95□□□□□ -1.78
HPS1Q92902 SNORD115-13-201ENST00000363358 82 ntBASIC3.95□□□□□ -1.78
HPS1Q92902 SNORD115-16-201ENST00000363887 82 ntBASIC3.95□□□□□ -1.78
HPS1Q92902 SNORD115-1-201ENST00000364961 82 ntBASIC3.95□□□□□ -1.78
HPS1Q92902 RNY1P6-201ENST00000384193 109 ntBASIC3.95□□□□□ -1.78
HPS1Q92902 RPL21P65-201ENST00000406094 466 ntBASIC3.95□□□□□ -1.78
HPS1Q92902 AL645608.4-201ENST00000423619 154 ntBASIC3.95□□□□□ -1.78
HPS1Q92902 AC016717.1-201ENST00000448918 286 ntBASIC3.95□□□□□ -1.78
HPS1Q92902 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms