Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 RNU1-117P-201ENST00000517041 158 ntBASIC2.36□□□□□ -2.03
VPS37AQ8NEZ2 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.36□□□□□ -2.03
VPS37AQ8NEZ2 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.36□□□□□ -2.03
VPS37AQ8NEZ2 RNU4-73P-201ENST00000363164 141 ntBASIC2.35□□□□□ -2.03
VPS37AQ8NEZ2 Y_RNA.415-201ENST00000384012 112 ntBASIC2.35□□□□□ -2.03
VPS37AQ8NEZ2 RNU6-1156P-201ENST00000410365 100 ntBASIC2.35□□□□□ -2.03
VPS37AQ8NEZ2 RNU6-1001P-201ENST00000411265 100 ntBASIC2.35□□□□□ -2.03
VPS37AQ8NEZ2 AC022028.1-201ENST00000412054 408 ntBASIC2.35□□□□□ -2.03
VPS37AQ8NEZ2 AC244636.1-201ENST00000421152 228 ntBASIC2.35□□□□□ -2.03
VPS37AQ8NEZ2 AF228730.4-201ENST00000421457 183 ntBASIC2.35□□□□□ -2.03
VPS37AQ8NEZ2 TOMM22P2-201ENST00000430735 237 ntBASIC2.35□□□□□ -2.03
VPS37AQ8NEZ2 SNORD109B-201ENST00000458961 67 ntBASIC2.35□□□□□ -2.03
VPS37AQ8NEZ2 SNORD109A-201ENST00000459128 67 ntBASIC2.35□□□□□ -2.03
VPS37AQ8NEZ2 RNU6-911P-201ENST00000516523 104 ntBASIC2.35□□□□□ -2.03
VPS37AQ8NEZ2 AC093027.1-201ENST00000546698 429 ntBASIC2.35□□□□□ -2.03
VPS37AQ8NEZ2 AK6P2-201ENST00000549020 471 ntBASIC2.35□□□□□ -2.03
VPS37AQ8NEZ2 GTF3AP2-201ENST00000557014 266 ntBASIC2.35□□□□□ -2.03
VPS37AQ8NEZ2 AC022254.1-201ENST00000567857 235 ntBASIC2.35□□□□□ -2.03
VPS37AQ8NEZ2 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
VPS37AQ8NEZ2 MZT1P2-201ENST00000604387 248 ntBASIC2.35□□□□□ -2.03
VPS37AQ8NEZ2 AC083806.3-201ENST00000614016 455 ntBASIC2.35□□□□□ -2.03
VPS37AQ8NEZ2 AL773524.1-201ENST00000614065 229 ntBASIC2.35□□□□□ -2.03
VPS37AQ8NEZ2 AC087588.2-201ENST00000617667 426 ntBASIC2.35□□□□□ -2.03
VPS37AQ8NEZ2 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.35□□□□□ -2.03
VPS37AQ8NEZ2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
VPS37AQ8NEZ2 Y_RNA.315-201ENST00000365117 102 ntBASIC2.34□□□□□ -2.03
VPS37AQ8NEZ2 MIR196B-201ENST00000384852 84 ntBASIC2.34□□□□□ -2.03
VPS37AQ8NEZ2 MIR515-2-201ENST00000384883 83 ntBASIC2.34□□□□□ -2.03
VPS37AQ8NEZ2 MIR515-1-201ENST00000384884 83 ntBASIC2.34□□□□□ -2.03
VPS37AQ8NEZ2 SNORA69.1-201ENST00000390904 137 ntBASIC2.34□□□□□ -2.03
VPS37AQ8NEZ2 AL117342.1-201ENST00000404861 406 ntBASIC2.34□□□□□ -2.03
VPS37AQ8NEZ2 MIR1185-2-201ENST00000408687 86 ntBASIC2.34□□□□□ -2.03
VPS37AQ8NEZ2 SNORA11.4-201ENST00000408823 129 ntBASIC2.34□□□□□ -2.03
VPS37AQ8NEZ2 Y_RNA.595-201ENST00000410403 105 ntBASIC2.34□□□□□ -2.03
VPS37AQ8NEZ2 AC063976.3-201ENST00000426849 329 ntBASIC2.34□□□□□ -2.03
VPS37AQ8NEZ2 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.34□□□□□ -2.03
VPS37AQ8NEZ2 AL445305.1-201ENST00000432577 575 ntBASIC2.34□□□□□ -2.03
VPS37AQ8NEZ2 YWHAEP4-201ENST00000505390 198 ntBASIC2.34□□□□□ -2.03
VPS37AQ8NEZ2 AC011406.1-201ENST00000512440 370 ntBASIC2.34□□□□□ -2.03
VPS37AQ8NEZ2 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.34□□□□□ -2.03
VPS37AQ8NEZ2 RNU6-1146P-201ENST00000516282 102 ntBASIC2.34□□□□□ -2.03
VPS37AQ8NEZ2 AC144568.1-201ENST00000520139 137 ntBASIC2.34□□□□□ -2.03
VPS37AQ8NEZ2 RAB11AP2-201ENST00000545905 639 ntBASIC2.34□□□□□ -2.03
VPS37AQ8NEZ2 SUB1P4-201ENST00000566062 339 ntBASIC2.34□□□□□ -2.03
VPS37AQ8NEZ2 MIR1244-1-201ENST00000612829 85 ntBASIC2.34□□□□□ -2.03
VPS37AQ8NEZ2 MIR1244-3-201ENST00000635744 85 ntBASIC2.34□□□□□ -2.03
VPS37AQ8NEZ2 MIR1244-2-201ENST00000636449 85 ntBASIC2.34□□□□□ -2.03
VPS37AQ8NEZ2 MIR1244-4-202ENST00000636813 85 ntBASIC2.34□□□□□ -2.03
VPS37AQ8NEZ2 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
VPS37AQ8NEZ2 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
VPS37AQ8NEZ2 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VPS37AQ8NEZ2 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
VPS37AQ8NEZ2 MIR410-201ENST00000362222 80 ntBASIC2.33□□□□□ -2.04
VPS37AQ8NEZ2 Y_RNA.67-201ENST00000362870 100 ntBASIC2.33□□□□□ -2.04
VPS37AQ8NEZ2 SNORA5B-201ENST00000363786 132 ntBASIC2.33□□□□□ -2.04
VPS37AQ8NEZ2 Y_RNA.358-201ENST00000365491 99 ntBASIC2.33□□□□□ -2.04
VPS37AQ8NEZ2 RNU6-301P-201ENST00000384277 107 ntBASIC2.33□□□□□ -2.04
VPS37AQ8NEZ2 SNORA51.11-201ENST00000384442 131 ntBASIC2.33□□□□□ -2.04
VPS37AQ8NEZ2 MIR548B-201ENST00000385247 97 ntBASIC2.33□□□□□ -2.04
VPS37AQ8NEZ2 Y_RNA.592-201ENST00000410274 109 ntBASIC2.33□□□□□ -2.04
VPS37AQ8NEZ2 AC060773.1-201ENST00000421698 310 ntBASIC2.33□□□□□ -2.04
VPS37AQ8NEZ2 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS37AQ8NEZ2 CST2P1-201ENST00000425770 87 ntBASIC2.33□□□□□ -2.04
VPS37AQ8NEZ2 AC010095.1-201ENST00000443543 144 ntBASIC2.33□□□□□ -2.04
VPS37AQ8NEZ2 AC016717.1-201ENST00000448918 286 ntBASIC2.33□□□□□ -2.04
VPS37AQ8NEZ2 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS37AQ8NEZ2 RNU7-87P-201ENST00000459343 62 ntBASIC2.33□□□□□ -2.04
VPS37AQ8NEZ2 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.33□□□□□ -2.04
VPS37AQ8NEZ2 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.33□□□□□ -2.04
VPS37AQ8NEZ2 AC025647.1-201ENST00000517879 253 ntBASIC2.33□□□□□ -2.04
VPS37AQ8NEZ2 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS37AQ8NEZ2 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.33□□□□□ -2.04
VPS37AQ8NEZ2 AL137847.3-201ENST00000611521 109 ntBASIC2.33□□□□□ -2.04
VPS37AQ8NEZ2 AC084781.2-201ENST00000615568 161 ntBASIC2.33□□□□□ -2.04
VPS37AQ8NEZ2 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.33□□□□□ -2.04
VPS37AQ8NEZ2 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VPS37AQ8NEZ2 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.32□□□□□ -2.04
VPS37AQ8NEZ2 RNU6-1115P-201ENST00000362490 106 ntBASIC2.32□□□□□ -2.04
VPS37AQ8NEZ2 RNA5SP276-201ENST00000362580 94 ntBASIC2.32□□□□□ -2.04
VPS37AQ8NEZ2 RNU4-79P-201ENST00000362764 141 ntBASIC2.32□□□□□ -2.04
VPS37AQ8NEZ2 Y_RNA.146-201ENST00000363549 102 ntBASIC2.32□□□□□ -2.04
VPS37AQ8NEZ2 RNU2-40P-201ENST00000410833 196 ntBASIC2.32□□□□□ -2.04
VPS37AQ8NEZ2 RNU6-57P-201ENST00000411348 103 ntBASIC2.32□□□□□ -2.04
VPS37AQ8NEZ2 AC114482.1-201ENST00000418010 247 ntBASIC2.32□□□□□ -2.04
VPS37AQ8NEZ2 HMGN2P19-201ENST00000425149 265 ntBASIC2.32□□□□□ -2.04
VPS37AQ8NEZ2 MTND4P28-201ENST00000426217 387 ntBASIC2.32□□□□□ -2.04
VPS37AQ8NEZ2 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS37AQ8NEZ2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS37AQ8NEZ2 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.32□□□□□ -2.04
VPS37AQ8NEZ2 RNVU1-2-201ENST00000516326 135 ntBASIC2.32□□□□□ -2.04
VPS37AQ8NEZ2 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.32□□□□□ -2.04
VPS37AQ8NEZ2 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.32□□□□□ -2.04
VPS37AQ8NEZ2 MIR4299-201ENST00000577899 72 ntBASIC2.32□□□□□ -2.04
VPS37AQ8NEZ2 AC010900.2-201ENST00000604508 210 ntBASIC2.32□□□□□ -2.04
VPS37AQ8NEZ2 AC069114.2-201ENST00000604699 304 ntBASIC2.32□□□□□ -2.04
VPS37AQ8NEZ2 AC013412.1-201ENST00000610687 192 ntBASIC2.32□□□□□ -2.04
VPS37AQ8NEZ2 U2.15-201ENST00000611544 191 ntBASIC2.32□□□□□ -2.04
VPS37AQ8NEZ2 U2.16-201ENST00000613119 191 ntBASIC2.32□□□□□ -2.04
VPS37AQ8NEZ2 U2.12-201ENST00000613778 191 ntBASIC2.32□□□□□ -2.04
VPS37AQ8NEZ2 U2.20-201ENST00000613956 192 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 300.3 ms