Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 RNU6-191P-201ENST00000516295 94 ntBASIC2.7□□□□□ -1.98
CLRN3Q8NCR9 MRPL49P2-201ENST00000521066 465 ntBASIC2.7□□□□□ -1.98
CLRN3Q8NCR9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.7□□□□□ -1.98
CLRN3Q8NCR9 MIR3939-201ENST00000582614 106 ntBASIC2.7□□□□□ -1.98
CLRN3Q8NCR9 AC005357.1-201ENST00000588399 301 ntBASIC2.7□□□□□ -1.98
CLRN3Q8NCR9 AC083809.1-201ENST00000615051 472 ntBASIC2.7□□□□□ -1.98
CLRN3Q8NCR9 AC112484.5-201ENST00000624189 228 ntBASIC2.7□□□□□ -1.98
CLRN3Q8NCR9 AP000553.6-201ENST00000641242 118 ntBASIC2.7□□□□□ -1.98
CLRN3Q8NCR9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CLRN3Q8NCR9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CLRN3Q8NCR9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CLRN3Q8NCR9 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
CLRN3Q8NCR9 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.69□□□□□ -1.98
CLRN3Q8NCR9 AL161912.2-201ENST00000565707 3007 ntBASIC2.69□□□□□ -1.98
CLRN3Q8NCR9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.69□□□□□ -1.98
CLRN3Q8NCR9 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CLRN3Q8NCR9 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.69□□□□□ -1.98
CLRN3Q8NCR9 AC009487.2-201ENST00000420969 6821 ntBASIC2.69□□□□□ -1.98
CLRN3Q8NCR9 SNORA27.1-201ENST00000362604 124 ntBASIC2.69□□□□□ -1.98
CLRN3Q8NCR9 Y_RNA.275-201ENST00000364726 110 ntBASIC2.69□□□□□ -1.98
CLRN3Q8NCR9 AL355796.1-201ENST00000406706 323 ntBASIC2.69□□□□□ -1.98
CLRN3Q8NCR9 RNU2-61P-201ENST00000411069 191 ntBASIC2.69□□□□□ -1.98
CLRN3Q8NCR9 AC016909.1-201ENST00000415916 166 ntBASIC2.69□□□□□ -1.98
CLRN3Q8NCR9 AL691449.1-201ENST00000426570 421 ntBASIC2.69□□□□□ -1.98
CLRN3Q8NCR9 AL121890.1-201ENST00000435457 205 ntBASIC2.69□□□□□ -1.98
CLRN3Q8NCR9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.69□□□□□ -1.98
CLRN3Q8NCR9 TBCAP1-201ENST00000436520 327 ntBASIC2.69□□□□□ -1.98
CLRN3Q8NCR9 AL353689.1-201ENST00000438895 199 ntBASIC2.69□□□□□ -1.98
CLRN3Q8NCR9 RPL23AP7-203ENST00000449021 469 ntBASIC2.69□□□□□ -1.98
CLRN3Q8NCR9 AP004217.1-201ENST00000480579 346 ntBASIC2.69□□□□□ -1.98
CLRN3Q8NCR9 RNA5SP137-201ENST00000516833 135 ntBASIC2.69□□□□□ -1.98
CLRN3Q8NCR9 MIR4658-201ENST00000584344 65 ntBASIC2.69□□□□□ -1.98
CLRN3Q8NCR9 AL162424.1-201ENST00000602325 221 ntBASIC2.69□□□□□ -1.98
CLRN3Q8NCR9 MIR6748-201ENST00000610433 71 ntBASIC2.69□□□□□ -1.98
CLRN3Q8NCR9 MIR6830-201ENST00000636015 70 ntBASIC2.69□□□□□ -1.98
CLRN3Q8NCR9 MIR492-201ENST00000638676 116 ntBASIC2.69□□□□□ -1.98
CLRN3Q8NCR9 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CLRN3Q8NCR9 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CLRN3Q8NCR9 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CLRN3Q8NCR9 Y_RNA.277-201ENST00000364754 102 ntBASIC2.68□□□□□ -1.98
CLRN3Q8NCR9 RNU1-109P-201ENST00000383960 147 ntBASIC2.68□□□□□ -1.98
CLRN3Q8NCR9 MIR141-201ENST00000384975 95 ntBASIC2.68□□□□□ -1.98
CLRN3Q8NCR9 SNORA40.19-201ENST00000390846 128 ntBASIC2.68□□□□□ -1.98
CLRN3Q8NCR9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.68□□□□□ -1.98
CLRN3Q8NCR9 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.68□□□□□ -1.98
CLRN3Q8NCR9 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC2.68□□□□□ -1.98
CLRN3Q8NCR9 AC008155.2-201ENST00000464337 397 ntBASIC2.68□□□□□ -1.98
CLRN3Q8NCR9 RNU6-388P-201ENST00000517012 105 ntBASIC2.68□□□□□ -1.98
CLRN3Q8NCR9 RNU6-389P-201ENST00000517048 105 ntBASIC2.68□□□□□ -1.98
CLRN3Q8NCR9 SUMO2P18-201ENST00000518873 252 ntBASIC2.68□□□□□ -1.98
CLRN3Q8NCR9 RPL21P9-201ENST00000556149 474 ntBASIC2.68□□□□□ -1.98
CLRN3Q8NCR9 PARP1P2-201ENST00000556806 195 ntBASIC2.68□□□□□ -1.98
CLRN3Q8NCR9 AC009127.3-201ENST00000570531 403 ntBASIC2.68□□□□□ -1.98
CLRN3Q8NCR9 AC141273.2-201ENST00000618989 130 ntBASIC2.68□□□□□ -1.98
CLRN3Q8NCR9 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.68□□□□□ -1.98
CLRN3Q8NCR9 CENPCP1-201ENST00000533085 2578 ntBASIC2.67□□□□□ -1.98
CLRN3Q8NCR9 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CLRN3Q8NCR9 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
CLRN3Q8NCR9 RNA5SP97-201ENST00000365006 84 ntBASIC2.67□□□□□ -1.98
CLRN3Q8NCR9 RNU6-407P-201ENST00000365280 104 ntBASIC2.67□□□□□ -1.98
CLRN3Q8NCR9 SNORA56-201ENST00000383966 129 ntBASIC2.67□□□□□ -1.98
CLRN3Q8NCR9 Y_RNA.515-201ENST00000384535 112 ntBASIC2.67□□□□□ -1.98
CLRN3Q8NCR9 MIR181B1-201ENST00000385240 110 ntBASIC2.67□□□□□ -1.98
CLRN3Q8NCR9 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.67□□□□□ -1.98
CLRN3Q8NCR9 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.67□□□□□ -1.98
CLRN3Q8NCR9 CR769767.1-201ENST00000436337 346 ntBASIC2.67□□□□□ -1.98
CLRN3Q8NCR9 AC115115.1-201ENST00000449927 248 ntBASIC2.67□□□□□ -1.98
CLRN3Q8NCR9 HSPE1P13-201ENST00000451143 297 ntBASIC2.67□□□□□ -1.98
CLRN3Q8NCR9 AC009220.1-201ENST00000451614 275 ntBASIC2.67□□□□□ -1.98
CLRN3Q8NCR9 RPL21P10-201ENST00000463521 490 ntBASIC2.67□□□□□ -1.98
CLRN3Q8NCR9 RN7SL385P-201ENST00000468873 276 ntBASIC2.67□□□□□ -1.98
CLRN3Q8NCR9 RPS26P55-201ENST00000471178 356 ntBASIC2.67□□□□□ -1.98
CLRN3Q8NCR9 RN7SL636P-201ENST00000497504 294 ntBASIC2.67□□□□□ -1.98
CLRN3Q8NCR9 AC011406.1-201ENST00000512440 370 ntBASIC2.67□□□□□ -1.98
CLRN3Q8NCR9 RN7SKP43-201ENST00000516173 320 ntBASIC2.67□□□□□ -1.98
CLRN3Q8NCR9 RNU4-71P-201ENST00000516258 113 ntBASIC2.67□□□□□ -1.98
CLRN3Q8NCR9 RNU6-794P-201ENST00000517261 64 ntBASIC2.67□□□□□ -1.98
CLRN3Q8NCR9 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.67□□□□□ -1.98
CLRN3Q8NCR9 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC2.67□□□□□ -1.98
CLRN3Q8NCR9 AL137100.2-201ENST00000555786 315 ntBASIC2.67□□□□□ -1.98
CLRN3Q8NCR9 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.67□□□□□ -1.98
CLRN3Q8NCR9 AC010900.2-201ENST00000604508 210 ntBASIC2.67□□□□□ -1.98
CLRN3Q8NCR9 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.67□□□□□ -1.98
CLRN3Q8NCR9 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 VTRNA1-1-201ENST00000363120 99 ntBASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 SNORA70.2-201ENST00000364506 135 ntBASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 RNU6-1318P-201ENST00000365389 103 ntBASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 SNORD58.1-201ENST00000391313 66 ntBASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 RNU6-855P-201ENST00000410395 104 ntBASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 AC060773.1-201ENST00000421698 310 ntBASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 AL139247.1-201ENST00000422768 325 ntBASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 AC108059.2-201ENST00000434626 151 ntBASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 RNA5SP20-201ENST00000515976 84 ntBASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 AL031274.2-201ENST00000599419 203 ntBASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 AL353149.1-201ENST00000610667 244 ntBASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 U2.15-201ENST00000611544 191 ntBASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 U2.16-201ENST00000613119 191 ntBASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 U2.12-201ENST00000613778 191 ntBASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 U2.20-201ENST00000613956 192 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms