Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 Z82217.1-201ENST00000625157 8149 ntBASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 RNA5SP388-201ENST00000362584 119 ntBASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 SNORA63.5-201ENST00000363548 123 ntBASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 SNORA70.2-201ENST00000364506 135 ntBASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 Y_RNA.323-201ENST00000365157 109 ntBASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 MIR488-201ENST00000365739 83 ntBASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 RNU2-32P-201ENST00000411193 191 ntBASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 AC016909.1-201ENST00000415916 166 ntBASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 AC008134.1-201ENST00000420943 193 ntBASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 AC097463.2-201ENST00000421074 142 ntBASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 RN7SL585P-201ENST00000470538 280 ntBASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 RN7SL807P-201ENST00000470923 297 ntBASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 AC109327.1-201ENST00000471666 403 ntBASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 AC093663.1-201ENST00000497190 394 ntBASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 RNU6-638P-201ENST00000516582 104 ntBASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 IFITM8P-201ENST00000522529 394 ntBASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 PARP1P2-201ENST00000556806 195 ntBASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 RNU6-94P-201ENST00000607728 107 ntBASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 AC107294.3-201ENST00000609211 526 ntBASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 MIR7702-201ENST00000621931 59 ntBASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CCDC116Q8IYX3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 AC009487.4-201ENST00000624969 3585 ntBASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 AF117829.1-206ENST00000621883 3802 ntBASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 RNA5SP295-201ENST00000362655 121 ntBASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 RNU1-22P-201ENST00000363334 158 ntBASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 RNA5SP173-201ENST00000364857 136 ntBASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 SNORD31B-201ENST00000364977 69 ntBASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 RNA5SP366-201ENST00000365454 123 ntBASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 Y_RNA.366-201ENST00000365540 102 ntBASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 RNU6-1275P-201ENST00000391087 107 ntBASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 RNA5SP39-201ENST00000411245 120 ntBASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 ARF4P2-201ENST00000430209 526 ntBASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 AC097462.1-201ENST00000514125 324 ntBASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 AC096725.1-201ENST00000514266 313 ntBASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 AC013412.1-201ENST00000610687 192 ntBASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 U6.73-201ENST00000619194 103 ntBASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 MIR4727-201ENST00000622232 55 ntBASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 AP003122.5-201ENST00000527668 3766 ntBASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 AL589743.1-201ENST00000551932 2712 ntBASIC3.93□□□□□ -1.78
CCDC116Q8IYX3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CCDC116Q8IYX3 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
CCDC116Q8IYX3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC116Q8IYX3 RNU6-1240P-201ENST00000365155 104 ntBASIC3.92□□□□□ -1.78
CCDC116Q8IYX3 RNU6-1292P-201ENST00000383856 107 ntBASIC3.92□□□□□ -1.78
CCDC116Q8IYX3 RNU6-418P-201ENST00000384035 107 ntBASIC3.92□□□□□ -1.78
CCDC116Q8IYX3 SNORA37-201ENST00000384504 129 ntBASIC3.92□□□□□ -1.78
CCDC116Q8IYX3 RNU6-1235P-201ENST00000384559 107 ntBASIC3.92□□□□□ -1.78
CCDC116Q8IYX3 Z98742.2-201ENST00000431564 187 ntBASIC3.92□□□□□ -1.78
CCDC116Q8IYX3 HMGN2P31-201ENST00000432430 273 ntBASIC3.92□□□□□ -1.78
CCDC116Q8IYX3 RPL23AP46-201ENST00000438548 490 ntBASIC3.92□□□□□ -1.78
CCDC116Q8IYX3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC116Q8IYX3 RNU6-498P-201ENST00000459468 107 ntBASIC3.92□□□□□ -1.78
CCDC116Q8IYX3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.92□□□□□ -1.78
CCDC116Q8IYX3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC116Q8IYX3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC116Q8IYX3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC116Q8IYX3 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC116Q8IYX3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC116Q8IYX3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC116Q8IYX3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CCDC116Q8IYX3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CCDC116Q8IYX3 MIR93-201ENST00000385024 80 ntBASIC3.91□□□□□ -1.78
CCDC116Q8IYX3 MIR513A2-201ENST00000385249 127 ntBASIC3.91□□□□□ -1.78
CCDC116Q8IYX3 HMGN2P8-201ENST00000391458 268 ntBASIC3.91□□□□□ -1.78
CCDC116Q8IYX3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC116Q8IYX3 AC091167.1-201ENST00000492017 396 ntBASIC3.91□□□□□ -1.78
CCDC116Q8IYX3 RNU6-1149P-201ENST00000516810 97 ntBASIC3.91□□□□□ -1.78
CCDC116Q8IYX3 RNU7-172P-201ENST00000517125 64 ntBASIC3.91□□□□□ -1.78
CCDC116Q8IYX3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC116Q8IYX3 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC116Q8IYX3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC116Q8IYX3 MIR1254-2-201ENST00000579553 63 ntBASIC3.91□□□□□ -1.78
CCDC116Q8IYX3 MIR3138-201ENST00000585238 82 ntBASIC3.91□□□□□ -1.78
CCDC116Q8IYX3 MIR3653-201ENST00000625572 110 ntBASIC3.91□□□□□ -1.78
CCDC116Q8IYX3 MIR1245B-201ENST00000636115 69 ntBASIC3.91□□□□□ -1.78
CCDC116Q8IYX3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC116Q8IYX3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC116Q8IYX3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC116Q8IYX3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.9□□□□□ -1.78
CCDC116Q8IYX3 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.9□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms