Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 RNU2-12P-201ENST00000517216 168 ntBASIC2.86□□□□□ -1.95
VRK3Q8IV63 MIR3136-201ENST00000583498 78 ntBASIC2.86□□□□□ -1.95
VRK3Q8IV63 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.86□□□□□ -1.95
VRK3Q8IV63 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.86□□□□□ -1.95
VRK3Q8IV63 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VRK3Q8IV63 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VRK3Q8IV63 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VRK3Q8IV63 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.85□□□□□ -1.95
VRK3Q8IV63 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VRK3Q8IV63 RNU4-84P-201ENST00000364200 139 ntBASIC2.85□□□□□ -1.95
VRK3Q8IV63 SNORD116-18-201ENST00000383961 92 ntBASIC2.85□□□□□ -1.95
VRK3Q8IV63 Y_RNA.412-201ENST00000384001 104 ntBASIC2.85□□□□□ -1.95
VRK3Q8IV63 SNORA18.3-201ENST00000384122 132 ntBASIC2.85□□□□□ -1.95
VRK3Q8IV63 SNORA44-201ENST00000384584 132 ntBASIC2.85□□□□□ -1.95
VRK3Q8IV63 AC096649.2-201ENST00000416186 393 ntBASIC2.85□□□□□ -1.95
VRK3Q8IV63 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.85□□□□□ -1.95
VRK3Q8IV63 AL162725.1-201ENST00000435405 301 ntBASIC2.85□□□□□ -1.95
VRK3Q8IV63 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.85□□□□□ -1.95
VRK3Q8IV63 RPS27AP9-201ENST00000477681 438 ntBASIC2.85□□□□□ -1.95
VRK3Q8IV63 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.85□□□□□ -1.95
VRK3Q8IV63 SNORA74D-201ENST00000516404 141 ntBASIC2.85□□□□□ -1.95
VRK3Q8IV63 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.85□□□□□ -1.95
VRK3Q8IV63 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.85□□□□□ -1.95
VRK3Q8IV63 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.85□□□□□ -1.95
VRK3Q8IV63 AL078604.3-201ENST00000615580 211 ntBASIC2.85□□□□□ -1.95
VRK3Q8IV63 AC068831.7-201ENST00000616954 363 ntBASIC2.85□□□□□ -1.95
VRK3Q8IV63 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.85□□□□□ -1.95
VRK3Q8IV63 SNORD98-201ENST00000636377 67 ntBASIC2.85□□□□□ -1.95
VRK3Q8IV63 AC000403.1-201ENST00000613696 3585 ntBASIC2.85□□□□□ -1.95
VRK3Q8IV63 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VRK3Q8IV63 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
VRK3Q8IV63 RNA5SP295-201ENST00000362655 121 ntBASIC2.84□□□□□ -1.95
VRK3Q8IV63 Y_RNA.343-201ENST00000365354 112 ntBASIC2.84□□□□□ -1.95
VRK3Q8IV63 Y_RNA.497-201ENST00000384447 98 ntBASIC2.84□□□□□ -1.95
VRK3Q8IV63 MIR549A-201ENST00000385268 96 ntBASIC2.84□□□□□ -1.95
VRK3Q8IV63 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
VRK3Q8IV63 MIR887-201ENST00000401258 79 ntBASIC2.84□□□□□ -1.95
VRK3Q8IV63 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.84□□□□□ -1.95
VRK3Q8IV63 BTF3P11-201ENST00000426582 477 ntBASIC2.84□□□□□ -1.95
VRK3Q8IV63 AC022018.1-201ENST00000430685 241 ntBASIC2.84□□□□□ -1.95
VRK3Q8IV63 AL139132.1-201ENST00000431587 344 ntBASIC2.84□□□□□ -1.95
VRK3Q8IV63 AL161651.1-201ENST00000440882 223 ntBASIC2.84□□□□□ -1.95
VRK3Q8IV63 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.84□□□□□ -1.95
VRK3Q8IV63 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.84□□□□□ -1.95
VRK3Q8IV63 RNU5F-2P-201ENST00000516066 82 ntBASIC2.84□□□□□ -1.95
VRK3Q8IV63 RNU1-61P-201ENST00000516107 151 ntBASIC2.84□□□□□ -1.95
VRK3Q8IV63 RNU7-121P-201ENST00000516604 62 ntBASIC2.84□□□□□ -1.95
VRK3Q8IV63 AC007536.1-201ENST00000533382 349 ntBASIC2.84□□□□□ -1.95
VRK3Q8IV63 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.84□□□□□ -1.95
VRK3Q8IV63 MIR3609-201ENST00000582661 80 ntBASIC2.84□□□□□ -1.95
VRK3Q8IV63 SNRPGP20-201ENST00000604477 205 ntBASIC2.84□□□□□ -1.95
VRK3Q8IV63 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.84□□□□□ -1.95
VRK3Q8IV63 CUL1P1-201ENST00000509510 2425 ntBASIC2.84□□□□□ -1.95
VRK3Q8IV63 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.84□□□□□ -1.96
VRK3Q8IV63 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
VRK3Q8IV63 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
VRK3Q8IV63 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.83□□□□□ -1.96
VRK3Q8IV63 Y_RNA.215-201ENST00000364204 112 ntBASIC2.83□□□□□ -1.96
VRK3Q8IV63 RNU6-454P-201ENST00000364292 107 ntBASIC2.83□□□□□ -1.96
VRK3Q8IV63 SNORA51.4-201ENST00000364993 124 ntBASIC2.83□□□□□ -1.96
VRK3Q8IV63 Y_RNA.329-201ENST00000365209 107 ntBASIC2.83□□□□□ -1.96
VRK3Q8IV63 Y_RNA.488-201ENST00000384403 102 ntBASIC2.83□□□□□ -1.96
VRK3Q8IV63 Y_RNA.586-201ENST00000391146 98 ntBASIC2.83□□□□□ -1.96
VRK3Q8IV63 CBX3P9-201ENST00000402326 552 ntBASIC2.83□□□□□ -1.96
VRK3Q8IV63 U3.40-201ENST00000408706 208 ntBASIC2.83□□□□□ -1.96
VRK3Q8IV63 RNA5SP201-201ENST00000410316 124 ntBASIC2.83□□□□□ -1.96
VRK3Q8IV63 RNA5SP475-201ENST00000410568 110 ntBASIC2.83□□□□□ -1.96
VRK3Q8IV63 RNA5SP344-201ENST00000411081 104 ntBASIC2.83□□□□□ -1.96
VRK3Q8IV63 AC023141.4-201ENST00000412031 328 ntBASIC2.83□□□□□ -1.96
VRK3Q8IV63 EEF1A1P41-201ENST00000414667 207 ntBASIC2.83□□□□□ -1.96
VRK3Q8IV63 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.83□□□□□ -1.96
VRK3Q8IV63 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.83□□□□□ -1.96
VRK3Q8IV63 AC012308.1-201ENST00000451232 178 ntBASIC2.83□□□□□ -1.96
VRK3Q8IV63 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.83□□□□□ -1.96
VRK3Q8IV63 snoU13.14-201ENST00000459372 104 ntBASIC2.83□□□□□ -1.96
VRK3Q8IV63 AP004217.1-201ENST00000480579 346 ntBASIC2.83□□□□□ -1.96
VRK3Q8IV63 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.83□□□□□ -1.96
VRK3Q8IV63 SCGB1D5P-201ENST00000515134 247 ntBASIC2.83□□□□□ -1.96
VRK3Q8IV63 AC009127.3-201ENST00000570531 403 ntBASIC2.83□□□□□ -1.96
VRK3Q8IV63 MIR3923-201ENST00000579521 83 ntBASIC2.83□□□□□ -1.96
VRK3Q8IV63 AC091152.3-201ENST00000604227 325 ntBASIC2.83□□□□□ -1.96
VRK3Q8IV63 HSPE1P7-201ENST00000604681 321 ntBASIC2.83□□□□□ -1.96
VRK3Q8IV63 RNU6-91P-201ENST00000607774 107 ntBASIC2.83□□□□□ -1.96
VRK3Q8IV63 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.83□□□□□ -1.96
VRK3Q8IV63 PCGEM1.1-201ENST00000613431 131 ntBASIC2.83□□□□□ -1.96
VRK3Q8IV63 MIR3199-2-201ENST00000636243 86 ntBASIC2.83□□□□□ -1.96
VRK3Q8IV63 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
VRK3Q8IV63 AC110774.1-201ENST00000623567 2018 ntBASIC2.83□□□□□ -1.96
VRK3Q8IV63 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
VRK3Q8IV63 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
VRK3Q8IV63 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VRK3Q8IV63 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.82□□□□□ -1.96
VRK3Q8IV63 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.82□□□□□ -1.96
VRK3Q8IV63 RNU6-1290P-201ENST00000362957 109 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 RNU6-529P-201ENST00000363383 104 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 RNU6-801P-201ENST00000364087 105 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 SNORA9.2-201ENST00000365361 133 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 RNU6-1264P-201ENST00000383891 107 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 SNORA1.3-201ENST00000384676 136 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 RNU6-763P-201ENST00000390865 106 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms