Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RFX6Q8HWS3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
RFX6Q8HWS3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RFX6Q8HWS3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.61□□□□□ -1.99
RFX6Q8HWS3 RNU6-1301P-201ENST00000362724 104 ntBASIC2.61□□□□□ -1.99
RFX6Q8HWS3 Y_RNA.84-201ENST00000363011 104 ntBASIC2.61□□□□□ -1.99
RFX6Q8HWS3 Y_RNA.117-201ENST00000363294 101 ntBASIC2.61□□□□□ -1.99
RFX6Q8HWS3 RNU5F-3P-201ENST00000363767 117 ntBASIC2.61□□□□□ -1.99
RFX6Q8HWS3 RNU6-280P-201ENST00000364145 104 ntBASIC2.61□□□□□ -1.99
RFX6Q8HWS3 MIR10B-201ENST00000385011 110 ntBASIC2.61□□□□□ -1.99
RFX6Q8HWS3 AL139095.1-201ENST00000404326 391 ntBASIC2.61□□□□□ -1.99
RFX6Q8HWS3 Z92545.1-201ENST00000411782 234 ntBASIC2.61□□□□□ -1.99
RFX6Q8HWS3 WARS2P1-201ENST00000429678 537 ntBASIC2.61□□□□□ -1.99
RFX6Q8HWS3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.61□□□□□ -1.99
RFX6Q8HWS3 RPL30P11-203ENST00000598995 310 ntBASIC2.61□□□□□ -1.99
RFX6Q8HWS3 AC010900.2-201ENST00000604508 210 ntBASIC2.61□□□□□ -1.99
RFX6Q8HWS3 AL033523.1-201ENST00000605153 153 ntBASIC2.61□□□□□ -1.99
RFX6Q8HWS3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.61□□□□□ -1.99
RFX6Q8HWS3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.61□□□□□ -1.99
RFX6Q8HWS3 U6.104-201ENST00000637979 90 ntBASIC2.61□□□□□ -1.99
RFX6Q8HWS3 AC010329.5-201ENST00000623497 2174 ntBASIC2.61□□□□□ -1.99
RFX6Q8HWS3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RFX6Q8HWS3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.61□□□□□ -1.99
RFX6Q8HWS3 AC069528.2-201ENST00000624849 1991 ntBASIC2.6□□□□□ -1.99
RFX6Q8HWS3 MIR335-201ENST00000362173 94 ntBASIC2.6□□□□□ -1.99
RFX6Q8HWS3 snoU2_19.1-201ENST00000362361 80 ntBASIC2.6□□□□□ -1.99
RFX6Q8HWS3 RNU4-15P-201ENST00000362613 141 ntBASIC2.6□□□□□ -1.99
RFX6Q8HWS3 snoU2_19.2-201ENST00000363024 80 ntBASIC2.6□□□□□ -1.99
RFX6Q8HWS3 Y_RNA.416-201ENST00000384014 113 ntBASIC2.6□□□□□ -1.99
RFX6Q8HWS3 RNU6-378P-201ENST00000384324 107 ntBASIC2.6□□□□□ -1.99
RFX6Q8HWS3 MIR215-201ENST00000384858 110 ntBASIC2.6□□□□□ -1.99
RFX6Q8HWS3 RNA5SP213-201ENST00000391031 106 ntBASIC2.6□□□□□ -1.99
RFX6Q8HWS3 SNORD78.2-201ENST00000391076 69 ntBASIC2.6□□□□□ -1.99
RFX6Q8HWS3 MIR320B2-201ENST00000408479 138 ntBASIC2.6□□□□□ -1.99
RFX6Q8HWS3 RNA5SP201-201ENST00000410316 124 ntBASIC2.6□□□□□ -1.99
RFX6Q8HWS3 SDAD1P3-201ENST00000427380 333 ntBASIC2.6□□□□□ -1.99
RFX6Q8HWS3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.6□□□□□ -1.99
RFX6Q8HWS3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.6□□□□□ -1.99
RFX6Q8HWS3 AC007215.1-201ENST00000464893 276 ntBASIC2.6□□□□□ -1.99
RFX6Q8HWS3 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.6□□□□□ -1.99
RFX6Q8HWS3 AC145146.1-201ENST00000496370 254 ntBASIC2.6□□□□□ -1.99
RFX6Q8HWS3 AC010469.2-201ENST00000496412 480 ntBASIC2.6□□□□□ -1.99
RFX6Q8HWS3 AC067942.3-201ENST00000512025 362 ntBASIC2.6□□□□□ -1.99
RFX6Q8HWS3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.6□□□□□ -1.99
RFX6Q8HWS3 RNU6-406P-201ENST00000516470 107 ntBASIC2.6□□□□□ -1.99
RFX6Q8HWS3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.6□□□□□ -1.99
RFX6Q8HWS3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.6□□□□□ -1.99
RFX6Q8HWS3 UBL5P4-201ENST00000562584 236 ntBASIC2.6□□□□□ -1.99
RFX6Q8HWS3 LARP7P3-201ENST00000579888 337 ntBASIC2.6□□□□□ -1.99
RFX6Q8HWS3 MIR3616-201ENST00000584070 92 ntBASIC2.6□□□□□ -1.99
RFX6Q8HWS3 AC009779.6-201ENST00000603972 165 ntBASIC2.6□□□□□ -1.99
RFX6Q8HWS3 MIR7106-201ENST00000612419 65 ntBASIC2.6□□□□□ -1.99
RFX6Q8HWS3 PCGEM1.1-201ENST00000613431 131 ntBASIC2.6□□□□□ -1.99
RFX6Q8HWS3 MIR7157-201ENST00000635801 60 ntBASIC2.6□□□□□ -1.99
RFX6Q8HWS3 U6.92-201ENST00000636464 89 ntBASIC2.6□□□□□ -1.99
RFX6Q8HWS3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
RFX6Q8HWS3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RFX6Q8HWS3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.6□□□□□ -1.99
RFX6Q8HWS3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RFX6Q8HWS3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RFX6Q8HWS3 U3.9-201ENST00000363823 204 ntBASIC2.59□□□□□ -1.99
RFX6Q8HWS3 RNY1-201ENST00000364228 113 ntBASIC2.59□□□□□ -1.99
RFX6Q8HWS3 RNU6-338P-201ENST00000383888 105 ntBASIC2.59□□□□□ -1.99
RFX6Q8HWS3 RNU6-281P-201ENST00000384212 103 ntBASIC2.59□□□□□ -1.99
RFX6Q8HWS3 Y_RNA.555-201ENST00000384673 110 ntBASIC2.59□□□□□ -1.99
RFX6Q8HWS3 MICF-203ENST00000432679 129 ntBASIC2.59□□□□□ -1.99
RFX6Q8HWS3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.59□□□□□ -1.99
RFX6Q8HWS3 RPS12P2-201ENST00000439728 269 ntBASIC2.59□□□□□ -1.99
RFX6Q8HWS3 AC073901.1-201ENST00000462471 408 ntBASIC2.59□□□□□ -1.99
RFX6Q8HWS3 Y_RNA.713-201ENST00000517013 96 ntBASIC2.59□□□□□ -1.99
RFX6Q8HWS3 RNU1-104P-201ENST00000517280 175 ntBASIC2.59□□□□□ -1.99
RFX6Q8HWS3 AC093023.1-201ENST00000547375 507 ntBASIC2.59□□□□□ -1.99
RFX6Q8HWS3 EIF4A1P12-201ENST00000551910 141 ntBASIC2.59□□□□□ -1.99
RFX6Q8HWS3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
RFX6Q8HWS3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
RFX6Q8HWS3 ZNF204P-201ENST00000416749 2397 ntBASIC2.59□□□□□ -2
RFX6Q8HWS3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.59□□□□□ -2
RFX6Q8HWS3 BX322639.1-202ENST00000423987 2213 ntBASIC2.58□□□□□ -2
RFX6Q8HWS3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.58□□□□□ -2
RFX6Q8HWS3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RFX6Q8HWS3 RNU6-873P-201ENST00000363833 107 ntBASIC2.58□□□□□ -2
RFX6Q8HWS3 Y_RNA.462-201ENST00000384268 102 ntBASIC2.58□□□□□ -2
RFX6Q8HWS3 SNORD115-46-201ENST00000390982 71 ntBASIC2.58□□□□□ -2
RFX6Q8HWS3 SNORA46.1-201ENST00000391069 153 ntBASIC2.58□□□□□ -2
RFX6Q8HWS3 AC007064.1-201ENST00000412238 351 ntBASIC2.58□□□□□ -2
RFX6Q8HWS3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.58□□□□□ -2
RFX6Q8HWS3 AL445305.1-201ENST00000432577 575 ntBASIC2.58□□□□□ -2
RFX6Q8HWS3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.58□□□□□ -2
RFX6Q8HWS3 AC140059.1-201ENST00000489238 361 ntBASIC2.58□□□□□ -2
RFX6Q8HWS3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.58□□□□□ -2
RFX6Q8HWS3 Y_RNA.700-201ENST00000516806 100 ntBASIC2.58□□□□□ -2
RFX6Q8HWS3 AC109329.2-201ENST00000519658 482 ntBASIC2.58□□□□□ -2
RFX6Q8HWS3 RRN3P3-201ENST00000549207 578 ntBASIC2.58□□□□□ -2
RFX6Q8HWS3 EIF4BP1-201ENST00000554881 351 ntBASIC2.58□□□□□ -2
RFX6Q8HWS3 AC136932.1-201ENST00000574771 208 ntBASIC2.58□□□□□ -2
RFX6Q8HWS3 MIR4319-201ENST00000577285 85 ntBASIC2.58□□□□□ -2
RFX6Q8HWS3 AC130289.1-201ENST00000577321 73 ntBASIC2.58□□□□□ -2
RFX6Q8HWS3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.58□□□□□ -2
RFX6Q8HWS3 SNRPGP20-201ENST00000604477 205 ntBASIC2.58□□□□□ -2
RFX6Q8HWS3 FTX_2.1-201ENST00000618816 94 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms