Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 Y_RNA.331-201ENST00000365267 102 ntBASIC3.12□□□□□ -1.91
DDX53Q86TM3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
DDX53Q86TM3 RPL32P35-201ENST00000415214 394 ntBASIC3.12□□□□□ -1.91
DDX53Q86TM3 AL390729.2-201ENST00000416137 156 ntBASIC3.12□□□□□ -1.91
DDX53Q86TM3 AC087499.2-201ENST00000432861 149 ntBASIC3.12□□□□□ -1.91
DDX53Q86TM3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.12□□□□□ -1.91
DDX53Q86TM3 AC108938.1-201ENST00000451204 136 ntBASIC3.12□□□□□ -1.91
DDX53Q86TM3 MTND4LP30-201ENST00000454092 297 ntBASIC3.12□□□□□ -1.91
DDX53Q86TM3 AC080013.2-201ENST00000460866 323 ntBASIC3.12□□□□□ -1.91
DDX53Q86TM3 HMGB3P17-201ENST00000504195 649 ntBASIC3.12□□□□□ -1.91
DDX53Q86TM3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.12□□□□□ -1.91
DDX53Q86TM3 RNU1-143P-201ENST00000516296 146 ntBASIC3.12□□□□□ -1.91
DDX53Q86TM3 Y_RNA.673-201ENST00000516306 88 ntBASIC3.12□□□□□ -1.91
DDX53Q86TM3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.12□□□□□ -1.91
DDX53Q86TM3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.12□□□□□ -1.91
DDX53Q86TM3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.12□□□□□ -1.91
DDX53Q86TM3 U1.23-201ENST00000610293 146 ntBASIC3.12□□□□□ -1.91
DDX53Q86TM3 RNU1-68P-201ENST00000615382 146 ntBASIC3.12□□□□□ -1.91
DDX53Q86TM3 MIR5739-201ENST00000619803 80 ntBASIC3.12□□□□□ -1.91
DDX53Q86TM3 U1.39-201ENST00000621562 146 ntBASIC3.12□□□□□ -1.91
DDX53Q86TM3 AC091932.3-201ENST00000624223 323 ntBASIC3.12□□□□□ -1.91
DDX53Q86TM3 MIR3674-201ENST00000636576 68 ntBASIC3.12□□□□□ -1.91
DDX53Q86TM3 AC135776.4-201ENST00000624300 1904 ntBASIC3.12□□□□□ -1.91
DDX53Q86TM3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
DDX53Q86TM3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
DDX53Q86TM3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.11□□□□□ -1.91
DDX53Q86TM3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.11□□□□□ -1.91
DDX53Q86TM3 AL136360.1-201ENST00000503377 1900 ntBASIC3.11□□□□□ -1.91
DDX53Q86TM3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.11□□□□□ -1.91
DDX53Q86TM3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.11□□□□□ -1.91
DDX53Q86TM3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
DDX53Q86TM3 MIR335-201ENST00000362173 94 ntBASIC3.11□□□□□ -1.91
DDX53Q86TM3 Y_RNA.101-201ENST00000363154 102 ntBASIC3.11□□□□□ -1.91
DDX53Q86TM3 RNU6-461P-201ENST00000364195 107 ntBASIC3.11□□□□□ -1.91
DDX53Q86TM3 SNORA67.2-201ENST00000384300 149 ntBASIC3.11□□□□□ -1.91
DDX53Q86TM3 AL513477.1-202ENST00000417061 214 ntBASIC3.11□□□□□ -1.91
DDX53Q86TM3 AC139712.2-201ENST00000424302 339 ntBASIC3.11□□□□□ -1.91
DDX53Q86TM3 AC063976.3-201ENST00000426849 329 ntBASIC3.11□□□□□ -1.91
DDX53Q86TM3 CKS1BP2-201ENST00000497342 240 ntBASIC3.11□□□□□ -1.91
DDX53Q86TM3 RNU6-966P-201ENST00000516479 104 ntBASIC3.11□□□□□ -1.91
DDX53Q86TM3 MIR3945-201ENST00000581853 98 ntBASIC3.11□□□□□ -1.91
DDX53Q86TM3 AC005357.1-201ENST00000588399 301 ntBASIC3.11□□□□□ -1.91
DDX53Q86TM3 AL109918.3-201ENST00000603072 338 ntBASIC3.11□□□□□ -1.91
DDX53Q86TM3 AC022441.3-201ENST00000605737 136 ntBASIC3.11□□□□□ -1.91
DDX53Q86TM3 AC006001.4-201ENST00000622243 395 ntBASIC3.11□□□□□ -1.91
DDX53Q86TM3 IGHVIII-44-202ENST00000636235 289 ntBASIC3.11□□□□□ -1.91
DDX53Q86TM3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
DDX53Q86TM3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
DDX53Q86TM3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
DDX53Q86TM3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
DDX53Q86TM3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.1□□□□□ -1.91
DDX53Q86TM3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.1□□□□□ -1.91
DDX53Q86TM3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
DDX53Q86TM3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
DDX53Q86TM3 RNU6-1305P-201ENST00000364353 104 ntBASIC3.1□□□□□ -1.91
DDX53Q86TM3 RNU6-1264P-201ENST00000383891 107 ntBASIC3.1□□□□□ -1.91
DDX53Q86TM3 RNU6-1310P-201ENST00000384153 107 ntBASIC3.1□□□□□ -1.91
DDX53Q86TM3 RNU6-220P-201ENST00000390919 107 ntBASIC3.1□□□□□ -1.91
DDX53Q86TM3 AL139095.1-201ENST00000404326 391 ntBASIC3.1□□□□□ -1.91
DDX53Q86TM3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
DDX53Q86TM3 RNA5SP475-201ENST00000410568 110 ntBASIC3.1□□□□□ -1.91
DDX53Q86TM3 RPL23AP36-201ENST00000413895 458 ntBASIC3.1□□□□□ -1.91
DDX53Q86TM3 AL109933.2-201ENST00000452651 260 ntBASIC3.1□□□□□ -1.91
DDX53Q86TM3 RNU7-14P-201ENST00000459331 62 ntBASIC3.1□□□□□ -1.91
DDX53Q86TM3 RNU6-1023P-201ENST00000516137 106 ntBASIC3.1□□□□□ -1.91
DDX53Q86TM3 RNU6-965P-201ENST00000516721 96 ntBASIC3.1□□□□□ -1.91
DDX53Q86TM3 AC245166.1-201ENST00000521012 253 ntBASIC3.1□□□□□ -1.91
DDX53Q86TM3 AC008749.1-201ENST00000597650 306 ntBASIC3.1□□□□□ -1.91
DDX53Q86TM3 AC010900.2-201ENST00000604508 210 ntBASIC3.1□□□□□ -1.91
DDX53Q86TM3 AC127459.3-201ENST00000624328 466 ntBASIC3.1□□□□□ -1.91
DDX53Q86TM3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
DDX53Q86TM3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
DDX53Q86TM3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
DDX53Q86TM3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
DDX53Q86TM3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.1□□□□□ -1.91
DDX53Q86TM3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.1□□□□□ -1.91
DDX53Q86TM3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.1□□□□□ -1.91
DDX53Q86TM3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
DDX53Q86TM3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.1□□□□□ -1.91
DDX53Q86TM3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
DDX53Q86TM3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
DDX53Q86TM3 SNORA20.1-201ENST00000364790 130 ntBASIC3.09□□□□□ -1.91
DDX53Q86TM3 RNA5SP274-201ENST00000410484 108 ntBASIC3.09□□□□□ -1.91
DDX53Q86TM3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.09□□□□□ -1.91
DDX53Q86TM3 AC009969.1-201ENST00000438726 172 ntBASIC3.09□□□□□ -1.91
DDX53Q86TM3 AL161788.1-201ENST00000441805 169 ntBASIC3.09□□□□□ -1.91
DDX53Q86TM3 AC004832.5-201ENST00000608677 401 ntBASIC3.09□□□□□ -1.91
DDX53Q86TM3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
DDX53Q86TM3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
DDX53Q86TM3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
DDX53Q86TM3 RNU6-545P-201ENST00000362681 104 ntBASIC3.08□□□□□ -1.92
DDX53Q86TM3 SNORD27-201ENST00000363981 72 ntBASIC3.08□□□□□ -1.92
DDX53Q86TM3 RNU6-234P-201ENST00000365229 104 ntBASIC3.08□□□□□ -1.92
DDX53Q86TM3 Y_RNA.446-201ENST00000384178 104 ntBASIC3.08□□□□□ -1.92
DDX53Q86TM3 Y_RNA.569-201ENST00000384749 103 ntBASIC3.08□□□□□ -1.92
DDX53Q86TM3 SNORA53-201ENST00000391141 249 ntBASIC3.08□□□□□ -1.92
DDX53Q86TM3 MIR548H3-201ENST00000408771 118 ntBASIC3.08□□□□□ -1.92
DDX53Q86TM3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.08□□□□□ -1.92
DDX53Q86TM3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.08□□□□□ -1.92
DDX53Q86TM3 AC005042.3-201ENST00000453230 174 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 182.8 ms