Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.56□□□□□ -2
PTCHD4Q6ZW05 AC055872.1-201ENST00000570978 278 ntBASIC2.56□□□□□ -2
PTCHD4Q6ZW05 ZNF861P-201ENST00000588126 639 ntBASIC2.56□□□□□ -2
PTCHD4Q6ZW05 AC011373.1-201ENST00000607270 237 ntBASIC2.56□□□□□ -2
PTCHD4Q6ZW05 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
PTCHD4Q6ZW05 Z82195.2-201ENST00000612348 18351 ntBASIC2.55□□□□□ -2
PTCHD4Q6ZW05 Y_RNA.14-201ENST00000362415 103 ntBASIC2.55□□□□□ -2
PTCHD4Q6ZW05 Y_RNA.230-201ENST00000364348 109 ntBASIC2.55□□□□□ -2
PTCHD4Q6ZW05 Y_RNA.286-201ENST00000364813 102 ntBASIC2.55□□□□□ -2
PTCHD4Q6ZW05 RNU6-1175P-201ENST00000365200 107 ntBASIC2.55□□□□□ -2
PTCHD4Q6ZW05 RNU1-138P-201ENST00000384093 164 ntBASIC2.55□□□□□ -2
PTCHD4Q6ZW05 Y_RNA.447-201ENST00000384184 113 ntBASIC2.55□□□□□ -2
PTCHD4Q6ZW05 MIR592-201ENST00000384959 97 ntBASIC2.55□□□□□ -2
PTCHD4Q6ZW05 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.55□□□□□ -2
PTCHD4Q6ZW05 RNA5SP171-201ENST00000391071 115 ntBASIC2.55□□□□□ -2
PTCHD4Q6ZW05 RNA5SP504-201ENST00000410676 117 ntBASIC2.55□□□□□ -2
PTCHD4Q6ZW05 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.55□□□□□ -2
PTCHD4Q6ZW05 MTND5P6-201ENST00000422338 1798 ntBASIC2.55□□□□□ -2
PTCHD4Q6ZW05 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.55□□□□□ -2
PTCHD4Q6ZW05 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
PTCHD4Q6ZW05 HSPE1P25-201ENST00000455484 251 ntBASIC2.55□□□□□ -2
PTCHD4Q6ZW05 RPS23P5-201ENST00000495419 428 ntBASIC2.55□□□□□ -2
PTCHD4Q6ZW05 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.55□□□□□ -2
PTCHD4Q6ZW05 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.55□□□□□ -2
PTCHD4Q6ZW05 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.55□□□□□ -2
PTCHD4Q6ZW05 AC091826.1-201ENST00000514065 313 ntBASIC2.55□□□□□ -2
PTCHD4Q6ZW05 RNA5SP367-201ENST00000516557 118 ntBASIC2.55□□□□□ -2
PTCHD4Q6ZW05 RNU5F-4P-201ENST00000516581 114 ntBASIC2.55□□□□□ -2
PTCHD4Q6ZW05 RNU6-107P-201ENST00000516643 102 ntBASIC2.55□□□□□ -2
PTCHD4Q6ZW05 SNORA31.15-201ENST00000516771 132 ntBASIC2.55□□□□□ -2
PTCHD4Q6ZW05 DEFB108E-201ENST00000524692 240 ntBASIC2.55□□□□□ -2
PTCHD4Q6ZW05 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.55□□□□□ -2
PTCHD4Q6ZW05 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PTCHD4Q6ZW05 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.55□□□□□ -2
PTCHD4Q6ZW05 RPL17P51-201ENST00000605218 238 ntBASIC2.55□□□□□ -2
PTCHD4Q6ZW05 MIR5739-201ENST00000619803 80 ntBASIC2.55□□□□□ -2
PTCHD4Q6ZW05 SDR42E1P4-201ENST00000620894 481 ntBASIC2.55□□□□□ -2
PTCHD4Q6ZW05 AC068205.3-201ENST00000636385 468 ntBASIC2.55□□□□□ -2
PTCHD4Q6ZW05 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PTCHD4Q6ZW05 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.54□□□□□ -2
PTCHD4Q6ZW05 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.54□□□□□ -2
PTCHD4Q6ZW05 RNU4-90P-201ENST00000362773 141 ntBASIC2.54□□□□□ -2
PTCHD4Q6ZW05 SNORD81.1-201ENST00000363064 77 ntBASIC2.54□□□□□ -2
PTCHD4Q6ZW05 Y_RNA.237-201ENST00000364439 102 ntBASIC2.54□□□□□ -2
PTCHD4Q6ZW05 SNORA72.2-201ENST00000365028 127 ntBASIC2.54□□□□□ -2
PTCHD4Q6ZW05 Y_RNA.350-201ENST00000365409 98 ntBASIC2.54□□□□□ -2
PTCHD4Q6ZW05 RNU1-52P-201ENST00000384190 164 ntBASIC2.54□□□□□ -2
PTCHD4Q6ZW05 Y_RNA.476-201ENST00000384347 108 ntBASIC2.54□□□□□ -2
PTCHD4Q6ZW05 Y_RNA.518-201ENST00000384552 113 ntBASIC2.54□□□□□ -2
PTCHD4Q6ZW05 RNU6-21P-201ENST00000384710 107 ntBASIC2.54□□□□□ -2
PTCHD4Q6ZW05 RNU6-220P-201ENST00000390919 107 ntBASIC2.54□□□□□ -2
PTCHD4Q6ZW05 SNORA48.7-201ENST00000391302 135 ntBASIC2.54□□□□□ -2
PTCHD4Q6ZW05 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.54□□□□□ -2
PTCHD4Q6ZW05 CKS1BP2-201ENST00000497342 240 ntBASIC2.54□□□□□ -2
PTCHD4Q6ZW05 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.54□□□□□ -2
PTCHD4Q6ZW05 SEPT14P8-201ENST00000508026 178 ntBASIC2.54□□□□□ -2
PTCHD4Q6ZW05 RNU6-1338P-201ENST00000516328 91 ntBASIC2.54□□□□□ -2
PTCHD4Q6ZW05 Y_RNA.680-201ENST00000516441 93 ntBASIC2.54□□□□□ -2
PTCHD4Q6ZW05 AP002001.1-203ENST00000534002 267 ntBASIC2.54□□□□□ -2
PTCHD4Q6ZW05 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.54□□□□□ -2
PTCHD4Q6ZW05 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.54□□□□□ -2
PTCHD4Q6ZW05 MIR1254-2-201ENST00000579553 63 ntBASIC2.54□□□□□ -2
PTCHD4Q6ZW05 AC012433.1-201ENST00000588916 398 ntBASIC2.54□□□□□ -2
PTCHD4Q6ZW05 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.54□□□□□ -2
PTCHD4Q6ZW05 SNORD113-5-201ENST00000607261 78 ntBASIC2.54□□□□□ -2
PTCHD4Q6ZW05 MIR6798-201ENST00000612887 67 ntBASIC2.54□□□□□ -2
PTCHD4Q6ZW05 AC010297.1-201ENST00000623948 149 ntBASIC2.54□□□□□ -2
PTCHD4Q6ZW05 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.54□□□□□ -2
PTCHD4Q6ZW05 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
PTCHD4Q6ZW05 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.53□□□□□ -2
PTCHD4Q6ZW05 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.53□□□□□ -2
PTCHD4Q6ZW05 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
PTCHD4Q6ZW05 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PTCHD4Q6ZW05 AL391987.6-201ENST00000305671 199 ntBASIC2.53□□□□□ -2
PTCHD4Q6ZW05 RNU6-290P-201ENST00000365212 101 ntBASIC2.53□□□□□ -2
PTCHD4Q6ZW05 SNORA67.2-201ENST00000384300 149 ntBASIC2.53□□□□□ -2
PTCHD4Q6ZW05 Y_RNA.477-201ENST00000384352 108 ntBASIC2.53□□□□□ -2
PTCHD4Q6ZW05 MIR524-201ENST00000385242 87 ntBASIC2.53□□□□□ -2
PTCHD4Q6ZW05 AL139109.1-201ENST00000455491 297 ntBASIC2.53□□□□□ -2
PTCHD4Q6ZW05 RPL39P38-201ENST00000467018 153 ntBASIC2.53□□□□□ -2
PTCHD4Q6ZW05 RPL7P49-201ENST00000471402 708 ntBASIC2.53□□□□□ -2
PTCHD4Q6ZW05 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.53□□□□□ -2
PTCHD4Q6ZW05 RNU6-965P-201ENST00000516721 96 ntBASIC2.53□□□□□ -2
PTCHD4Q6ZW05 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.53□□□□□ -2
PTCHD4Q6ZW05 AC004486.1-201ENST00000546846 233 ntBASIC2.53□□□□□ -2
PTCHD4Q6ZW05 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.53□□□□□ -2
PTCHD4Q6ZW05 AL049779.4-201ENST00000604500 156 ntBASIC2.53□□□□□ -2
PTCHD4Q6ZW05 AC090425.1-201ENST00000610007 140 ntBASIC2.53□□□□□ -2
PTCHD4Q6ZW05 AC004467.1-201ENST00000615678 330 ntBASIC2.53□□□□□ -2
PTCHD4Q6ZW05 AC091932.3-201ENST00000624223 323 ntBASIC2.53□□□□□ -2
PTCHD4Q6ZW05 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
PTCHD4Q6ZW05 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.53□□□□□ -2
PTCHD4Q6ZW05 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.53□□□□□ -2
PTCHD4Q6ZW05 Z82209.1-201ENST00000422141 2135 ntBASIC2.53□□□□□ -2.01
PTCHD4Q6ZW05 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
PTCHD4Q6ZW05 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
PTCHD4Q6ZW05 MIR422A-201ENST00000362286 90 ntBASIC2.52□□□□□ -2.01
PTCHD4Q6ZW05 Y_RNA.101-201ENST00000363154 102 ntBASIC2.52□□□□□ -2.01
PTCHD4Q6ZW05 RNU6-379P-201ENST00000363813 104 ntBASIC2.52□□□□□ -2.01
PTCHD4Q6ZW05 RNU6-234P-201ENST00000365229 104 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms