Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 MIR4738-201ENST00000579134 87 ntBASIC3.39□□□□□ -1.87
CNKSR3Q6P9H4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CNKSR3Q6P9H4 HMGN2P15-201ENST00000585707 270 ntBASIC3.39□□□□□ -1.87
CNKSR3Q6P9H4 AL359881.1-201ENST00000602916 267 ntBASIC3.39□□□□□ -1.87
CNKSR3Q6P9H4 MIR3658-201ENST00000636291 56 ntBASIC3.39□□□□□ -1.87
CNKSR3Q6P9H4 MIR3529-201ENST00000637713 78 ntBASIC3.39□□□□□ -1.87
CNKSR3Q6P9H4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CNKSR3Q6P9H4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.39□□□□□ -1.87
CNKSR3Q6P9H4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.39□□□□□ -1.87
CNKSR3Q6P9H4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.39□□□□□ -1.87
CNKSR3Q6P9H4 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.38□□□□□ -1.87
CNKSR3Q6P9H4 AC099654.7-201ENST00000635788 2127 ntBASIC3.38□□□□□ -1.87
CNKSR3Q6P9H4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CNKSR3Q6P9H4 AC092268.1-201ENST00000342691 405 ntBASIC3.38□□□□□ -1.87
CNKSR3Q6P9H4 RNU6-801P-201ENST00000364087 105 ntBASIC3.38□□□□□ -1.87
CNKSR3Q6P9H4 SNORD116-14-201ENST00000383894 92 ntBASIC3.38□□□□□ -1.87
CNKSR3Q6P9H4 SNORD116-17-201ENST00000383929 92 ntBASIC3.38□□□□□ -1.87
CNKSR3Q6P9H4 RNU6-793P-201ENST00000384233 104 ntBASIC3.38□□□□□ -1.87
CNKSR3Q6P9H4 SNORD116-15-201ENST00000384445 92 ntBASIC3.38□□□□□ -1.87
CNKSR3Q6P9H4 SNORD116-19-201ENST00000384729 92 ntBASIC3.38□□□□□ -1.87
CNKSR3Q6P9H4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.38□□□□□ -1.87
CNKSR3Q6P9H4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.38□□□□□ -1.87
CNKSR3Q6P9H4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.38□□□□□ -1.87
CNKSR3Q6P9H4 AC007215.1-201ENST00000464893 276 ntBASIC3.38□□□□□ -1.87
CNKSR3Q6P9H4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.38□□□□□ -1.87
CNKSR3Q6P9H4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.38□□□□□ -1.87
CNKSR3Q6P9H4 Y_RNA.797-201ENST00000515977 94 ntBASIC3.38□□□□□ -1.87
CNKSR3Q6P9H4 SNORA31.16-201ENST00000516773 139 ntBASIC3.38□□□□□ -1.87
CNKSR3Q6P9H4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.38□□□□□ -1.87
CNKSR3Q6P9H4 ELOCP29-201ENST00000588193 334 ntBASIC3.38□□□□□ -1.87
CNKSR3Q6P9H4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.38□□□□□ -1.87
CNKSR3Q6P9H4 U7.8-201ENST00000619968 63 ntBASIC3.38□□□□□ -1.87
CNKSR3Q6P9H4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CNKSR3Q6P9H4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CNKSR3Q6P9H4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CNKSR3Q6P9H4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.38□□□□□ -1.87
CNKSR3Q6P9H4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CNKSR3Q6P9H4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.37□□□□□ -1.87
CNKSR3Q6P9H4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CNKSR3Q6P9H4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.37□□□□□ -1.87
CNKSR3Q6P9H4 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.37□□□□□ -1.87
CNKSR3Q6P9H4 MIR22-201ENST00000362190 85 ntBASIC3.37□□□□□ -1.87
CNKSR3Q6P9H4 snoU2_19.4-201ENST00000364329 80 ntBASIC3.37□□□□□ -1.87
CNKSR3Q6P9H4 RNU6-1325P-201ENST00000364905 105 ntBASIC3.37□□□□□ -1.87
CNKSR3Q6P9H4 EBAG9P1-201ENST00000418955 543 ntBASIC3.37□□□□□ -1.87
CNKSR3Q6P9H4 BPY2DP-201ENST00000422208 265 ntBASIC3.37□□□□□ -1.87
CNKSR3Q6P9H4 RPS20P10-201ENST00000451209 253 ntBASIC3.37□□□□□ -1.87
CNKSR3Q6P9H4 RNU6-436P-201ENST00000516171 114 ntBASIC3.37□□□□□ -1.87
CNKSR3Q6P9H4 RNA5SP367-201ENST00000516557 118 ntBASIC3.37□□□□□ -1.87
CNKSR3Q6P9H4 CKS1BP7-201ENST00000522230 235 ntBASIC3.37□□□□□ -1.87
CNKSR3Q6P9H4 AC021269.2-201ENST00000532318 330 ntBASIC3.37□□□□□ -1.87
CNKSR3Q6P9H4 AC022616.8-201ENST00000533569 253 ntBASIC3.37□□□□□ -1.87
CNKSR3Q6P9H4 AC009127.3-201ENST00000570531 403 ntBASIC3.37□□□□□ -1.87
CNKSR3Q6P9H4 MIR4431-201ENST00000579990 94 ntBASIC3.37□□□□□ -1.87
CNKSR3Q6P9H4 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.37□□□□□ -1.87
CNKSR3Q6P9H4 AC244205.2-202ENST00000635781 342 ntBASIC3.37□□□□□ -1.87
CNKSR3Q6P9H4 MIR3674-201ENST00000636576 68 ntBASIC3.37□□□□□ -1.87
CNKSR3Q6P9H4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CNKSR3Q6P9H4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.37□□□□□ -1.87
CNKSR3Q6P9H4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CNKSR3Q6P9H4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CNKSR3Q6P9H4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.36□□□□□ -1.87
CNKSR3Q6P9H4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CNKSR3Q6P9H4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CNKSR3Q6P9H4 RNU6-727P-201ENST00000363592 107 ntBASIC3.36□□□□□ -1.87
CNKSR3Q6P9H4 RNU6-899P-201ENST00000363947 107 ntBASIC3.36□□□□□ -1.87
CNKSR3Q6P9H4 RNU4-10P-201ENST00000364383 140 ntBASIC3.36□□□□□ -1.87
CNKSR3Q6P9H4 RNU6-578P-201ENST00000390980 103 ntBASIC3.36□□□□□ -1.87
CNKSR3Q6P9H4 RNU6-1248P-201ENST00000391096 64 ntBASIC3.36□□□□□ -1.87
CNKSR3Q6P9H4 AC096649.2-201ENST00000416186 393 ntBASIC3.36□□□□□ -1.87
CNKSR3Q6P9H4 RPL30P13-201ENST00000418873 348 ntBASIC3.36□□□□□ -1.87
CNKSR3Q6P9H4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.36□□□□□ -1.87
CNKSR3Q6P9H4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.36□□□□□ -1.87
CNKSR3Q6P9H4 RNU6-581P-201ENST00000516214 105 ntBASIC3.36□□□□□ -1.87
CNKSR3Q6P9H4 RNU2-12P-201ENST00000517216 168 ntBASIC3.36□□□□□ -1.87
CNKSR3Q6P9H4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.36□□□□□ -1.87
CNKSR3Q6P9H4 AC069294.1-201ENST00000608397 350 ntBASIC3.36□□□□□ -1.87
CNKSR3Q6P9H4 AC008873.1-201ENST00000625051 138 ntBASIC3.36□□□□□ -1.87
CNKSR3Q6P9H4 MIR3199-2-201ENST00000636243 86 ntBASIC3.36□□□□□ -1.87
CNKSR3Q6P9H4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CNKSR3Q6P9H4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CNKSR3Q6P9H4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CNKSR3Q6P9H4 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CNKSR3Q6P9H4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 ADAM3A-203ENST00000461344 2157 ntBASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 RNU1-105P-201ENST00000363470 161 ntBASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 RNU5F-3P-201ENST00000363767 117 ntBASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 RNU6-454P-201ENST00000364292 107 ntBASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 RNU6-1310P-201ENST00000384153 107 ntBASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 Y_RNA.542-201ENST00000384641 111 ntBASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 Y_RNA.572-201ENST00000384757 98 ntBASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 SNORD67-201ENST00000390833 111 ntBASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 SNORA26.5-201ENST00000391215 123 ntBASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 U3.40-201ENST00000408706 208 ntBASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 AC010154.1-201ENST00000425857 269 ntBASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 AL135938.1-201ENST00000443141 297 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms