Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC133485.4-201ENST00000561835 220 ntBASIC3.7□□□□□ -1.82
RNF43Q68DV7 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.7□□□□□ -1.82
RNF43Q68DV7 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.7□□□□□ -1.82
RNF43Q68DV7 AC138907.4-201ENST00000570107 226 ntBASIC3.7□□□□□ -1.82
RNF43Q68DV7 MIR3186-201ENST00000577404 85 ntBASIC3.7□□□□□ -1.82
RNF43Q68DV7 AL591926.4-201ENST00000616895 298 ntBASIC3.7□□□□□ -1.82
RNF43Q68DV7 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.7□□□□□ -1.82
RNF43Q68DV7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RNF43Q68DV7 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RNF43Q68DV7 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.7□□□□□ -1.82
RNF43Q68DV7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RNF43Q68DV7 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RNF43Q68DV7 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
RNF43Q68DV7 MFSD8-233ENST00000641482 4860 ntBASIC3.69□□□□□ -1.82
RNF43Q68DV7 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF43Q68DV7 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.69□□□□□ -1.82
RNF43Q68DV7 AC022336.2-201ENST00000568966 2538 ntBASIC3.69□□□□□ -1.82
RNF43Q68DV7 MIR450A1-201ENST00000362262 91 ntBASIC3.69□□□□□ -1.82
RNF43Q68DV7 RNU6-597P-201ENST00000365620 102 ntBASIC3.69□□□□□ -1.82
RNF43Q68DV7 RNU6-144P-201ENST00000383951 107 ntBASIC3.69□□□□□ -1.82
RNF43Q68DV7 RN7SKP111-201ENST00000410349 271 ntBASIC3.69□□□□□ -1.82
RNF43Q68DV7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.69□□□□□ -1.82
RNF43Q68DV7 AP000873.1-201ENST00000463987 400 ntBASIC3.69□□□□□ -1.82
RNF43Q68DV7 RPS29P20-201ENST00000489592 171 ntBASIC3.69□□□□□ -1.82
RNF43Q68DV7 RPL30P5-201ENST00000494923 336 ntBASIC3.69□□□□□ -1.82
RNF43Q68DV7 AIG1P1-201ENST00000503376 148 ntBASIC3.69□□□□□ -1.82
RNF43Q68DV7 Y_RNA.692-201ENST00000516627 105 ntBASIC3.69□□□□□ -1.82
RNF43Q68DV7 RNU1-117P-201ENST00000517041 158 ntBASIC3.69□□□□□ -1.82
RNF43Q68DV7 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.69□□□□□ -1.82
RNF43Q68DV7 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.69□□□□□ -1.82
RNF43Q68DV7 MIR3923-201ENST00000579521 83 ntBASIC3.69□□□□□ -1.82
RNF43Q68DV7 MIR8057-201ENST00000620957 69 ntBASIC3.69□□□□□ -1.82
RNF43Q68DV7 AC018692.3-201ENST00000623929 123 ntBASIC3.69□□□□□ -1.82
RNF43Q68DV7 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.69□□□□□ -1.82
RNF43Q68DV7 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.69□□□□□ -1.82
RNF43Q68DV7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
RNF43Q68DV7 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF43Q68DV7 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF43Q68DV7 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.68□□□□□ -1.82
RNF43Q68DV7 Z82209.1-201ENST00000422141 2135 ntBASIC3.68□□□□□ -1.82
RNF43Q68DV7 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF43Q68DV7 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.68□□□□□ -1.82
RNF43Q68DV7 MIR30E-201ENST00000362104 92 ntBASIC3.68□□□□□ -1.82
RNF43Q68DV7 RNA5SP42-201ENST00000364278 115 ntBASIC3.68□□□□□ -1.82
RNF43Q68DV7 RNU6-1164P-201ENST00000364428 107 ntBASIC3.68□□□□□ -1.82
RNF43Q68DV7 Y_RNA.280-201ENST00000364765 112 ntBASIC3.68□□□□□ -1.82
RNF43Q68DV7 MIR548A3-201ENST00000385297 97 ntBASIC3.68□□□□□ -1.82
RNF43Q68DV7 MIR1302-4-201ENST00000408701 150 ntBASIC3.68□□□□□ -1.82
RNF43Q68DV7 RNY4P30-201ENST00000410216 95 ntBASIC3.68□□□□□ -1.82
RNF43Q68DV7 RNA5SP504-201ENST00000410676 117 ntBASIC3.68□□□□□ -1.82
RNF43Q68DV7 NDUFS5P4-201ENST00000412983 318 ntBASIC3.68□□□□□ -1.82
RNF43Q68DV7 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF43Q68DV7 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.68□□□□□ -1.82
RNF43Q68DV7 MIR3136-201ENST00000583498 78 ntBASIC3.68□□□□□ -1.82
RNF43Q68DV7 SNORD11B-201ENST00000607707 90 ntBASIC3.68□□□□□ -1.82
RNF43Q68DV7 U6.115-201ENST00000636045 103 ntBASIC3.68□□□□□ -1.82
RNF43Q68DV7 AC068205.3-201ENST00000636385 468 ntBASIC3.68□□□□□ -1.82
RNF43Q68DV7 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RNF43Q68DV7 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
RNF43Q68DV7 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RNF43Q68DV7 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
RNF43Q68DV7 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF43Q68DV7 RNU1-75P-201ENST00000347264 129 ntBASIC3.67□□□□□ -1.82
RNF43Q68DV7 U8.1-201ENST00000362843 134 ntBASIC3.67□□□□□ -1.82
RNF43Q68DV7 SNORD45.3-201ENST00000363836 72 ntBASIC3.67□□□□□ -1.82
RNF43Q68DV7 RNU1-33P-201ENST00000364249 162 ntBASIC3.67□□□□□ -1.82
RNF43Q68DV7 RNU6-32P-201ENST00000383948 107 ntBASIC3.67□□□□□ -1.82
RNF43Q68DV7 RNU6-13P-201ENST00000384248 107 ntBASIC3.67□□□□□ -1.82
RNF43Q68DV7 RNU6-12P-201ENST00000384604 107 ntBASIC3.67□□□□□ -1.82
RNF43Q68DV7 RNU6-41P-201ENST00000384741 107 ntBASIC3.67□□□□□ -1.82
RNF43Q68DV7 AC027124.2-201ENST00000428249 105 ntBASIC3.67□□□□□ -1.82
RNF43Q68DV7 AC005326.1-201ENST00000429197 123 ntBASIC3.67□□□□□ -1.82
RNF43Q68DV7 RPS4XP2-201ENST00000458402 793 ntBASIC3.67□□□□□ -1.82
RNF43Q68DV7 AC008155.2-201ENST00000464337 397 ntBASIC3.67□□□□□ -1.82
RNF43Q68DV7 RN7SL442P-201ENST00000473804 320 ntBASIC3.67□□□□□ -1.82
RNF43Q68DV7 RNU5F-2P-201ENST00000516066 82 ntBASIC3.67□□□□□ -1.82
RNF43Q68DV7 SNORA70.14-201ENST00000516205 110 ntBASIC3.67□□□□□ -1.82
RNF43Q68DV7 RNU6-344P-201ENST00000516635 111 ntBASIC3.67□□□□□ -1.82
RNF43Q68DV7 SNORA70.18-201ENST00000516696 98 ntBASIC3.67□□□□□ -1.82
RNF43Q68DV7 RNU6-1073P-201ENST00000517182 106 ntBASIC3.67□□□□□ -1.82
RNF43Q68DV7 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.67□□□□□ -1.82
RNF43Q68DV7 MIR378D2-201ENST00000580636 98 ntBASIC3.67□□□□□ -1.82
RNF43Q68DV7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.67□□□□□ -1.82
RNF43Q68DV7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.67□□□□□ -1.82
RNF43Q68DV7 AL137843.1-201ENST00000605078 385 ntBASIC3.67□□□□□ -1.82
RNF43Q68DV7 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF43Q68DV7 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF43Q68DV7 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RNF43Q68DV7 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.66□□□□□ -1.82
RNF43Q68DV7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.66□□□□□ -1.82
RNF43Q68DV7 Y_RNA.114-201ENST00000363265 113 ntBASIC3.66□□□□□ -1.82
RNF43Q68DV7 RNU6-487P-201ENST00000365430 104 ntBASIC3.66□□□□□ -1.82
RNF43Q68DV7 Y_RNA.361-201ENST00000365515 120 ntBASIC3.66□□□□□ -1.82
RNF43Q68DV7 RNY3P5-201ENST00000384127 102 ntBASIC3.66□□□□□ -1.82
RNF43Q68DV7 SNORA20B-201ENST00000384220 132 ntBASIC3.66□□□□□ -1.82
RNF43Q68DV7 RN7SKP284-201ENST00000411002 343 ntBASIC3.66□□□□□ -1.82
RNF43Q68DV7 DBIP2-201ENST00000419076 262 ntBASIC3.66□□□□□ -1.82
RNF43Q68DV7 AC245047.4-201ENST00000433189 144 ntBASIC3.66□□□□□ -1.82
RNF43Q68DV7 NDUFB4P6-201ENST00000436819 366 ntBASIC3.66□□□□□ -1.82
RNF43Q68DV7 HSPE1P21-201ENST00000438283 308 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms