Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SNORA67.2-201ENST00000384300 149 ntBASIC4.49□□□□□ -1.69
RC3H1Q5TC82 SNORA72-201ENST00000384339 132 ntBASIC4.49□□□□□ -1.69
RC3H1Q5TC82 RNA5SP104-201ENST00000410989 118 ntBASIC4.49□□□□□ -1.69
RC3H1Q5TC82 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC4.49□□□□□ -1.69
RC3H1Q5TC82 HMGN2P21-201ENST00000447764 270 ntBASIC4.49□□□□□ -1.69
RC3H1Q5TC82 AC025445.1-201ENST00000502728 300 ntBASIC4.49□□□□□ -1.69
RC3H1Q5TC82 ACA59.2-201ENST00000517061 156 ntBASIC4.49□□□□□ -1.69
RC3H1Q5TC82 EIF4A1P12-201ENST00000551910 141 ntBASIC4.49□□□□□ -1.69
RC3H1Q5TC82 MIR5680-201ENST00000577577 84 ntBASIC4.49□□□□□ -1.69
RC3H1Q5TC82 AC062037.1-201ENST00000605302 128 ntBASIC4.49□□□□□ -1.69
RC3H1Q5TC82 MIR1245B-201ENST00000636115 69 ntBASIC4.49□□□□□ -1.69
RC3H1Q5TC82 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RC3H1Q5TC82 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
RC3H1Q5TC82 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RC3H1Q5TC82 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
RC3H1Q5TC82 LINC02471-203ENST00000641941 4752 ntBASIC4.48□□□□□ -1.69
RC3H1Q5TC82 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
RC3H1Q5TC82 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RC3H1Q5TC82 Y_RNA.85-201ENST00000363014 111 ntBASIC4.48□□□□□ -1.69
RC3H1Q5TC82 EDDM3CP-201ENST00000415977 425 ntBASIC4.48□□□□□ -1.69
RC3H1Q5TC82 NDUFB1P1-201ENST00000435191 180 ntBASIC4.48□□□□□ -1.69
RC3H1Q5TC82 SRIP1-201ENST00000489235 288 ntBASIC4.48□□□□□ -1.69
RC3H1Q5TC82 RN7SL504P-201ENST00000494496 287 ntBASIC4.48□□□□□ -1.69
RC3H1Q5TC82 AC078918.1-201ENST00000498515 228 ntBASIC4.48□□□□□ -1.69
RC3H1Q5TC82 RNU6-1299P-201ENST00000516316 100 ntBASIC4.48□□□□□ -1.69
RC3H1Q5TC82 SNORA40.13-201ENST00000516379 120 ntBASIC4.48□□□□□ -1.69
RC3H1Q5TC82 RN7SKP289-201ENST00000517244 295 ntBASIC4.48□□□□□ -1.69
RC3H1Q5TC82 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.48□□□□□ -1.69
RC3H1Q5TC82 PRELID2P1-201ENST00000552837 301 ntBASIC4.48□□□□□ -1.69
RC3H1Q5TC82 AC021739.1-201ENST00000559631 174 ntBASIC4.48□□□□□ -1.69
RC3H1Q5TC82 POLR3GP1-201ENST00000594073 261 ntBASIC4.48□□□□□ -1.69
RC3H1Q5TC82 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.48□□□□□ -1.69
RC3H1Q5TC82 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RC3H1Q5TC82 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RC3H1Q5TC82 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RC3H1Q5TC82 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RC3H1Q5TC82 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RC3H1Q5TC82 RNA5SP374-201ENST00000362939 125 ntBASIC4.47□□□□□ -1.69
RC3H1Q5TC82 Y_RNA.163-201ENST00000363702 113 ntBASIC4.47□□□□□ -1.69
RC3H1Q5TC82 SNORA18.2-201ENST00000383865 132 ntBASIC4.47□□□□□ -1.69
RC3H1Q5TC82 RNU6-1323P-201ENST00000384025 107 ntBASIC4.47□□□□□ -1.69
RC3H1Q5TC82 SNORA51.5-201ENST00000384126 131 ntBASIC4.47□□□□□ -1.69
RC3H1Q5TC82 AL135786.1-201ENST00000415892 214 ntBASIC4.47□□□□□ -1.69
RC3H1Q5TC82 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.47□□□□□ -1.69
RC3H1Q5TC82 RNU6-437P-201ENST00000459408 95 ntBASIC4.47□□□□□ -1.69
RC3H1Q5TC82 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.47□□□□□ -1.69
RC3H1Q5TC82 AC012531.5-201ENST00000611375 151 ntBASIC4.47□□□□□ -1.69
RC3H1Q5TC82 AL138880.2-201ENST00000616214 239 ntBASIC4.47□□□□□ -1.69
RC3H1Q5TC82 AC009831.4-201ENST00000620744 325 ntBASIC4.47□□□□□ -1.69
RC3H1Q5TC82 MIR6852-201ENST00000621699 66 ntBASIC4.47□□□□□ -1.69
RC3H1Q5TC82 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RC3H1Q5TC82 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.47□□□□□ -1.69
RC3H1Q5TC82 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.47□□□□□ -1.69
RC3H1Q5TC82 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RC3H1Q5TC82 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
RC3H1Q5TC82 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.69
RC3H1Q5TC82 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.46□□□□□ -1.7
RC3H1Q5TC82 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RC3H1Q5TC82 Y_RNA.510-201ENST00000384511 114 ntBASIC4.46□□□□□ -1.7
RC3H1Q5TC82 MIR548B-201ENST00000385247 97 ntBASIC4.46□□□□□ -1.7
RC3H1Q5TC82 MIR493-201ENST00000385254 89 ntBASIC4.46□□□□□ -1.7
RC3H1Q5TC82 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.46□□□□□ -1.7
RC3H1Q5TC82 MIR1302-5-201ENST00000408164 150 ntBASIC4.46□□□□□ -1.7
RC3H1Q5TC82 MIR1289-1-201ENST00000408836 144 ntBASIC4.46□□□□□ -1.7
RC3H1Q5TC82 MIR1183-201ENST00000408856 89 ntBASIC4.46□□□□□ -1.7
RC3H1Q5TC82 Y_RNA.685-201ENST00000516532 108 ntBASIC4.46□□□□□ -1.7
RC3H1Q5TC82 RNU2-44P-201ENST00000516795 194 ntBASIC4.46□□□□□ -1.7
RC3H1Q5TC82 AL022345.2-201ENST00000606307 135 ntBASIC4.46□□□□□ -1.7
RC3H1Q5TC82 AL021707.8-201ENST00000609428 183 ntBASIC4.46□□□□□ -1.7
RC3H1Q5TC82 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.46□□□□□ -1.7
RC3H1Q5TC82 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
RC3H1Q5TC82 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.45□□□□□ -1.7
RC3H1Q5TC82 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
RC3H1Q5TC82 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.45□□□□□ -1.7
RC3H1Q5TC82 SNORA31-201ENST00000362607 130 ntBASIC4.45□□□□□ -1.7
RC3H1Q5TC82 Y_RNA.124-201ENST00000363339 93 ntBASIC4.45□□□□□ -1.7
RC3H1Q5TC82 RNU6-674P-201ENST00000363831 107 ntBASIC4.45□□□□□ -1.7
RC3H1Q5TC82 RNU4-41P-201ENST00000364426 143 ntBASIC4.45□□□□□ -1.7
RC3H1Q5TC82 RNA5SP125-201ENST00000364843 120 ntBASIC4.45□□□□□ -1.7
RC3H1Q5TC82 SNORD6-201ENST00000365444 73 ntBASIC4.45□□□□□ -1.7
RC3H1Q5TC82 Y_RNA.500-201ENST00000384466 111 ntBASIC4.45□□□□□ -1.7
RC3H1Q5TC82 SNORD12C-201ENST00000386307 89 ntBASIC4.45□□□□□ -1.7
RC3H1Q5TC82 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.45□□□□□ -1.7
RC3H1Q5TC82 RNU6-1337P-201ENST00000516525 95 ntBASIC4.45□□□□□ -1.7
RC3H1Q5TC82 RN7SKP209-201ENST00000516888 304 ntBASIC4.45□□□□□ -1.7
RC3H1Q5TC82 RNU7-116P-201ENST00000516940 62 ntBASIC4.45□□□□□ -1.7
RC3H1Q5TC82 EIF4BP1-201ENST00000554881 351 ntBASIC4.45□□□□□ -1.7
RC3H1Q5TC82 AC007012.1-201ENST00000567192 175 ntBASIC4.45□□□□□ -1.7
RC3H1Q5TC82 AC105137.2-201ENST00000569073 466 ntBASIC4.45□□□□□ -1.7
RC3H1Q5TC82 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.45□□□□□ -1.7
RC3H1Q5TC82 Z83843.1-201ENST00000604070 3685 ntBASIC4.45□□□□□ -1.7
RC3H1Q5TC82 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
RC3H1Q5TC82 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RC3H1Q5TC82 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RC3H1Q5TC82 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RC3H1Q5TC82 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
RC3H1Q5TC82 SNORA51.10-201ENST00000384418 136 ntBASIC4.44□□□□□ -1.7
RC3H1Q5TC82 MIR1263-201ENST00000408324 86 ntBASIC4.44□□□□□ -1.7
RC3H1Q5TC82 RNU2-37P-201ENST00000410695 177 ntBASIC4.44□□□□□ -1.7
RC3H1Q5TC82 NDUFB4P6-201ENST00000436819 366 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms