Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 MTND5P15-201ENST00000434246 349 ntBASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 AC010095.1-201ENST00000443543 144 ntBASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 SUMO1P2-201ENST00000452524 304 ntBASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 RPS3P1-201ENST00000456781 192 ntBASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 RN7SL633P-201ENST00000488974 297 ntBASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 RNU6-567P-201ENST00000516746 107 ntBASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 Y_RNA.713-201ENST00000517013 96 ntBASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 AC027176.1-201ENST00000560204 514 ntBASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 MIR4659A-201ENST00000580269 81 ntBASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 MIR3670-2-201ENST00000582974 65 ntBASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 MIR3670-1-201ENST00000584160 65 ntBASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 MIR3670-3-201ENST00000584855 65 ntBASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 MIR3670-4-201ENST00000612260 65 ntBASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 MIR7157-201ENST00000635801 60 ntBASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.87□□□□□ -1.95
SLC44A4Q53GD3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SLC44A4Q53GD3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SLC44A4Q53GD3 Y_RNA.416-201ENST00000384014 113 ntBASIC2.87□□□□□ -1.95
SLC44A4Q53GD3 RNU6-937P-201ENST00000384325 106 ntBASIC2.87□□□□□ -1.95
SLC44A4Q53GD3 RNU6-541P-201ENST00000384709 110 ntBASIC2.87□□□□□ -1.95
SLC44A4Q53GD3 AL590004.2-201ENST00000404787 371 ntBASIC2.87□□□□□ -1.95
SLC44A4Q53GD3 Y_RNA.602-201ENST00000410535 92 ntBASIC2.87□□□□□ -1.95
SLC44A4Q53GD3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.87□□□□□ -1.95
SLC44A4Q53GD3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.87□□□□□ -1.95
SLC44A4Q53GD3 AL139109.1-201ENST00000455491 297 ntBASIC2.87□□□□□ -1.95
SLC44A4Q53GD3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.87□□□□□ -1.95
SLC44A4Q53GD3 RNU6-138P-201ENST00000515952 107 ntBASIC2.87□□□□□ -1.95
SLC44A4Q53GD3 RNU6-1012P-201ENST00000516606 109 ntBASIC2.87□□□□□ -1.95
SLC44A4Q53GD3 MIR6817-201ENST00000615588 66 ntBASIC2.87□□□□□ -1.95
SLC44A4Q53GD3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.87□□□□□ -1.95
SLC44A4Q53GD3 LINC02555-201ENST00000563933 1951 ntBASIC2.87□□□□□ -1.95
SLC44A4Q53GD3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
SLC44A4Q53GD3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
SLC44A4Q53GD3 Y_RNA.20-201ENST00000362479 113 ntBASIC2.86□□□□□ -1.95
SLC44A4Q53GD3 Y_RNA.54-201ENST00000362766 105 ntBASIC2.86□□□□□ -1.95
SLC44A4Q53GD3 Y_RNA.65-201ENST00000362846 100 ntBASIC2.86□□□□□ -1.95
SLC44A4Q53GD3 RNU6-209P-201ENST00000384118 107 ntBASIC2.86□□□□□ -1.95
SLC44A4Q53GD3 RNU6-220P-201ENST00000390919 107 ntBASIC2.86□□□□□ -1.95
SLC44A4Q53GD3 AL603910.2-201ENST00000407268 136 ntBASIC2.86□□□□□ -1.95
SLC44A4Q53GD3 RNU2-14P-201ENST00000411053 191 ntBASIC2.86□□□□□ -1.95
SLC44A4Q53GD3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.86□□□□□ -1.95
SLC44A4Q53GD3 MTND2P29-201ENST00000438595 412 ntBASIC2.86□□□□□ -1.95
SLC44A4Q53GD3 SUMO1P3-201ENST00000439961 304 ntBASIC2.86□□□□□ -1.95
SLC44A4Q53GD3 SNORA31.15-201ENST00000516771 132 ntBASIC2.86□□□□□ -1.95
SLC44A4Q53GD3 SCARNA24.2-201ENST00000516968 130 ntBASIC2.86□□□□□ -1.95
SLC44A4Q53GD3 MIR2355-201ENST00000517199 87 ntBASIC2.86□□□□□ -1.95
SLC44A4Q53GD3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.86□□□□□ -1.95
SLC44A4Q53GD3 Y_RNA.772-201ENST00000606692 102 ntBASIC2.86□□□□□ -1.95
SLC44A4Q53GD3 AL365434.2-201ENST00000607979 234 ntBASIC2.86□□□□□ -1.95
SLC44A4Q53GD3 AC069294.1-201ENST00000608397 350 ntBASIC2.86□□□□□ -1.95
SLC44A4Q53GD3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.86□□□□□ -1.95
SLC44A4Q53GD3 PCGEM1.1-201ENST00000613431 131 ntBASIC2.86□□□□□ -1.95
SLC44A4Q53GD3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.86□□□□□ -1.95
SLC44A4Q53GD3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.86□□□□□ -1.95
SLC44A4Q53GD3 AC069528.2-201ENST00000624849 1991 ntBASIC2.86□□□□□ -1.95
SLC44A4Q53GD3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SLC44A4Q53GD3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.86□□□□□ -1.95
SLC44A4Q53GD3 ZNF204P-201ENST00000416749 2397 ntBASIC2.85□□□□□ -1.95
SLC44A4Q53GD3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SLC44A4Q53GD3 RNU6-1159P-201ENST00000362933 107 ntBASIC2.85□□□□□ -1.95
SLC44A4Q53GD3 RNU6-944P-201ENST00000364023 107 ntBASIC2.85□□□□□ -1.95
SLC44A4Q53GD3 RNU6-879P-201ENST00000364328 108 ntBASIC2.85□□□□□ -1.95
SLC44A4Q53GD3 Y_RNA.277-201ENST00000364754 102 ntBASIC2.85□□□□□ -1.95
SLC44A4Q53GD3 RNU6-318P-201ENST00000384283 103 ntBASIC2.85□□□□□ -1.95
SLC44A4Q53GD3 Y_RNA.478-201ENST00000384358 107 ntBASIC2.85□□□□□ -1.95
SLC44A4Q53GD3 RNU6-1274P-201ENST00000384557 107 ntBASIC2.85□□□□□ -1.95
SLC44A4Q53GD3 Y_RNA.541-201ENST00000384640 113 ntBASIC2.85□□□□□ -1.95
SLC44A4Q53GD3 U6atac.2-201ENST00000408644 118 ntBASIC2.85□□□□□ -1.95
SLC44A4Q53GD3 RNA5SP21-201ENST00000410917 96 ntBASIC2.85□□□□□ -1.95
SLC44A4Q53GD3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.85□□□□□ -1.95
SLC44A4Q53GD3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.85□□□□□ -1.95
SLC44A4Q53GD3 WARS2P1-201ENST00000429678 537 ntBASIC2.85□□□□□ -1.95
SLC44A4Q53GD3 Z96811.1-201ENST00000445880 108 ntBASIC2.85□□□□□ -1.95
SLC44A4Q53GD3 AC103975.1-201ENST00000482506 483 ntBASIC2.85□□□□□ -1.95
SLC44A4Q53GD3 AC096725.1-201ENST00000514266 313 ntBASIC2.85□□□□□ -1.95
SLC44A4Q53GD3 RNU6-1338P-201ENST00000516328 91 ntBASIC2.85□□□□□ -1.95
SLC44A4Q53GD3 RNA5SP148-201ENST00000516527 94 ntBASIC2.85□□□□□ -1.95
SLC44A4Q53GD3 RNU6-58P-201ENST00000517143 103 ntBASIC2.85□□□□□ -1.95
SLC44A4Q53GD3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.85□□□□□ -1.95
SLC44A4Q53GD3 MIR5695-201ENST00000579717 85 ntBASIC2.85□□□□□ -1.95
SLC44A4Q53GD3 SNORD53-201ENST00000579969 78 ntBASIC2.85□□□□□ -1.95
SLC44A4Q53GD3 MIR3117-201ENST00000584034 78 ntBASIC2.85□□□□□ -1.95
SLC44A4Q53GD3 AC138915.1-201ENST00000565427 1685 ntBASIC2.85□□□□□ -1.95
SLC44A4Q53GD3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
SLC44A4Q53GD3 MIR335-201ENST00000362173 94 ntBASIC2.84□□□□□ -1.95
SLC44A4Q53GD3 SNORD113-8-201ENST00000363497 74 ntBASIC2.84□□□□□ -1.95
SLC44A4Q53GD3 RNU6-102P-201ENST00000384485 104 ntBASIC2.84□□□□□ -1.95
SLC44A4Q53GD3 MIR10B-201ENST00000385011 110 ntBASIC2.84□□□□□ -1.95
SLC44A4Q53GD3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
SLC44A4Q53GD3 SNORD78.2-201ENST00000391076 69 ntBASIC2.84□□□□□ -1.95
SLC44A4Q53GD3 MIR548H3-201ENST00000408771 118 ntBASIC2.84□□□□□ -1.95
SLC44A4Q53GD3 RPS26P42-201ENST00000413485 326 ntBASIC2.84□□□□□ -1.95
SLC44A4Q53GD3 EIF1P2-201ENST00000428233 350 ntBASIC2.84□□□□□ -1.95
SLC44A4Q53GD3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.84□□□□□ -1.95
SLC44A4Q53GD3 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.84□□□□□ -1.95
SLC44A4Q53GD3 HSPE1P18-201ENST00000517602 280 ntBASIC2.84□□□□□ -1.95
SLC44A4Q53GD3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms