Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
LONRF3Q496Y0 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.9□□□□□ -1.95
LONRF3Q496Y0 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
LONRF3Q496Y0 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.89□□□□□ -1.95
LONRF3Q496Y0 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LONRF3Q496Y0 RNU6-1301P-201ENST00000362724 104 ntBASIC2.89□□□□□ -1.95
LONRF3Q496Y0 RNU1-76P-201ENST00000362903 159 ntBASIC2.89□□□□□ -1.95
LONRF3Q496Y0 RNU6-238P-201ENST00000363313 106 ntBASIC2.89□□□□□ -1.95
LONRF3Q496Y0 RNU6-574P-201ENST00000384265 107 ntBASIC2.89□□□□□ -1.95
LONRF3Q496Y0 RNU6-196P-201ENST00000384315 107 ntBASIC2.89□□□□□ -1.95
LONRF3Q496Y0 Y_RNA.574-201ENST00000384766 95 ntBASIC2.89□□□□□ -1.95
LONRF3Q496Y0 MIR10B-201ENST00000385011 110 ntBASIC2.89□□□□□ -1.95
LONRF3Q496Y0 RNU6-159P-201ENST00000391080 106 ntBASIC2.89□□□□□ -1.95
LONRF3Q496Y0 RNU6-1109P-201ENST00000391187 107 ntBASIC2.89□□□□□ -1.95
LONRF3Q496Y0 MIR208B-201ENST00000401172 77 ntBASIC2.89□□□□□ -1.95
LONRF3Q496Y0 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
LONRF3Q496Y0 AL445305.1-201ENST00000432577 575 ntBASIC2.89□□□□□ -1.95
LONRF3Q496Y0 AC096638.1-201ENST00000444678 216 ntBASIC2.89□□□□□ -1.95
LONRF3Q496Y0 AC073910.1-201ENST00000445047 438 ntBASIC2.89□□□□□ -1.95
LONRF3Q496Y0 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.89□□□□□ -1.95
LONRF3Q496Y0 AC008413.1-201ENST00000511864 177 ntBASIC2.89□□□□□ -1.95
LONRF3Q496Y0 AC096725.1-201ENST00000514266 313 ntBASIC2.89□□□□□ -1.95
LONRF3Q496Y0 RNU6-1198P-201ENST00000516904 67 ntBASIC2.89□□□□□ -1.95
LONRF3Q496Y0 AC034114.1-201ENST00000520293 285 ntBASIC2.89□□□□□ -1.95
LONRF3Q496Y0 AC090517.1-201ENST00000569307 266 ntBASIC2.89□□□□□ -1.95
LONRF3Q496Y0 MIR5695-201ENST00000579717 85 ntBASIC2.89□□□□□ -1.95
LONRF3Q496Y0 RAC1P9-201ENST00000604990 392 ntBASIC2.89□□□□□ -1.95
LONRF3Q496Y0 AC005520.5-201ENST00000613926 164 ntBASIC2.89□□□□□ -1.95
LONRF3Q496Y0 7SK.10-201ENST00000621414 298 ntBASIC2.89□□□□□ -1.95
LONRF3Q496Y0 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.89□□□□□ -1.95
LONRF3Q496Y0 U6.92-201ENST00000636464 89 ntBASIC2.89□□□□□ -1.95
LONRF3Q496Y0 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LONRF3Q496Y0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
LONRF3Q496Y0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
LONRF3Q496Y0 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.88□□□□□ -1.95
LONRF3Q496Y0 RNU4-15P-201ENST00000362613 141 ntBASIC2.88□□□□□ -1.95
LONRF3Q496Y0 RNU6-879P-201ENST00000364328 108 ntBASIC2.88□□□□□ -1.95
LONRF3Q496Y0 Y_RNA.471-201ENST00000384312 102 ntBASIC2.88□□□□□ -1.95
LONRF3Q496Y0 RNU6-1093P-201ENST00000391194 107 ntBASIC2.88□□□□□ -1.95
LONRF3Q496Y0 RNA5SP508-201ENST00000411327 119 ntBASIC2.88□□□□□ -1.95
LONRF3Q496Y0 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.88□□□□□ -1.95
LONRF3Q496Y0 EDDM3CP-201ENST00000415977 425 ntBASIC2.88□□□□□ -1.95
LONRF3Q496Y0 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.88□□□□□ -1.95
LONRF3Q496Y0 RNU6-397P-201ENST00000516226 104 ntBASIC2.88□□□□□ -1.95
LONRF3Q496Y0 HSPE1P18-201ENST00000517602 280 ntBASIC2.88□□□□□ -1.95
LONRF3Q496Y0 MIR3670-2-201ENST00000582974 65 ntBASIC2.88□□□□□ -1.95
LONRF3Q496Y0 MIR3670-1-201ENST00000584160 65 ntBASIC2.88□□□□□ -1.95
LONRF3Q496Y0 MIR3670-3-201ENST00000584855 65 ntBASIC2.88□□□□□ -1.95
LONRF3Q496Y0 MIR3670-4-201ENST00000612260 65 ntBASIC2.88□□□□□ -1.95
LONRF3Q496Y0 AC005296.1-201ENST00000616145 209 ntBASIC2.88□□□□□ -1.95
LONRF3Q496Y0 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
LONRF3Q496Y0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.87□□□□□ -1.95
LONRF3Q496Y0 SNORD114-30-201ENST00000364448 72 ntBASIC2.87□□□□□ -1.95
LONRF3Q496Y0 RNU6-318P-201ENST00000384283 103 ntBASIC2.87□□□□□ -1.95
LONRF3Q496Y0 RNU6-378P-201ENST00000384324 107 ntBASIC2.87□□□□□ -1.95
LONRF3Q496Y0 AL355497.1-201ENST00000406262 551 ntBASIC2.87□□□□□ -1.95
LONRF3Q496Y0 RNA5SP201-201ENST00000410316 124 ntBASIC2.87□□□□□ -1.95
LONRF3Q496Y0 AC009963.1-201ENST00000417265 157 ntBASIC2.87□□□□□ -1.95
LONRF3Q496Y0 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.87□□□□□ -1.95
LONRF3Q496Y0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.87□□□□□ -1.95
LONRF3Q496Y0 RPEP5-201ENST00000441137 268 ntBASIC2.87□□□□□ -1.95
LONRF3Q496Y0 FCF1P4-201ENST00000448326 183 ntBASIC2.87□□□□□ -1.95
LONRF3Q496Y0 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.87□□□□□ -1.95
LONRF3Q496Y0 RNA5SP54-201ENST00000516951 92 ntBASIC2.87□□□□□ -1.95
LONRF3Q496Y0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.87□□□□□ -1.95
LONRF3Q496Y0 MIR4529-201ENST00000578110 78 ntBASIC2.87□□□□□ -1.95
LONRF3Q496Y0 MIR4503-201ENST00000582187 83 ntBASIC2.87□□□□□ -1.95
LONRF3Q496Y0 MIR4435-1-201ENST00000582552 80 ntBASIC2.87□□□□□ -1.95
LONRF3Q496Y0 MIR5092-201ENST00000583139 88 ntBASIC2.87□□□□□ -1.95
LONRF3Q496Y0 AC125232.2-201ENST00000592457 143 ntBASIC2.87□□□□□ -1.95
LONRF3Q496Y0 AL121655.1-201ENST00000605811 308 ntBASIC2.87□□□□□ -1.95
LONRF3Q496Y0 PCGEM1.1-201ENST00000613431 131 ntBASIC2.87□□□□□ -1.95
LONRF3Q496Y0 AC022202.1-201ENST00000613515 211 ntBASIC2.87□□□□□ -1.95
LONRF3Q496Y0 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.87□□□□□ -1.95
LONRF3Q496Y0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.87□□□□□ -1.95
LONRF3Q496Y0 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
LONRF3Q496Y0 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.86□□□□□ -1.95
LONRF3Q496Y0 RNA5SP361-201ENST00000362686 118 ntBASIC2.86□□□□□ -1.95
LONRF3Q496Y0 SNORD115-3-201ENST00000363100 82 ntBASIC2.86□□□□□ -1.95
LONRF3Q496Y0 Y_RNA.214-201ENST00000364201 112 ntBASIC2.86□□□□□ -1.95
LONRF3Q496Y0 RNU6-281P-201ENST00000384212 103 ntBASIC2.86□□□□□ -1.95
LONRF3Q496Y0 Y_RNA.458-201ENST00000384240 102 ntBASIC2.86□□□□□ -1.95
LONRF3Q496Y0 Y_RNA.512-201ENST00000384518 102 ntBASIC2.86□□□□□ -1.95
LONRF3Q496Y0 MIR549A-201ENST00000385268 96 ntBASIC2.86□□□□□ -1.95
LONRF3Q496Y0 RPL21P1-201ENST00000399532 476 ntBASIC2.86□□□□□ -1.95
LONRF3Q496Y0 RNU6-130P-201ENST00000411112 103 ntBASIC2.86□□□□□ -1.95
LONRF3Q496Y0 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.86□□□□□ -1.95
LONRF3Q496Y0 ELOCP20-201ENST00000422460 345 ntBASIC2.86□□□□□ -1.95
LONRF3Q496Y0 SDAD1P3-201ENST00000427380 333 ntBASIC2.86□□□□□ -1.95
LONRF3Q496Y0 IPO7P1-201ENST00000442031 636 ntBASIC2.86□□□□□ -1.95
LONRF3Q496Y0 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.86□□□□□ -1.95
LONRF3Q496Y0 AC007215.1-201ENST00000464893 276 ntBASIC2.86□□□□□ -1.95
LONRF3Q496Y0 AC093023.1-201ENST00000547375 507 ntBASIC2.86□□□□□ -1.95
LONRF3Q496Y0 AC121758.2-201ENST00000553271 193 ntBASIC2.86□□□□□ -1.95
LONRF3Q496Y0 AC007336.1-201ENST00000576365 3828 ntBASIC2.86□□□□□ -1.95
LONRF3Q496Y0 AC026271.5-201ENST00000577873 130 ntBASIC2.86□□□□□ -1.95
LONRF3Q496Y0 MIR5694-201ENST00000581190 76 ntBASIC2.86□□□□□ -1.95
LONRF3Q496Y0 AC007229.1-201ENST00000590455 412 ntBASIC2.86□□□□□ -1.95
LONRF3Q496Y0 AL031274.2-201ENST00000599419 203 ntBASIC2.86□□□□□ -1.95
LONRF3Q496Y0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 261.1 ms