Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 RMST_3.1-201ENST00000611651 109 ntBASIC0.79□□□□□ -2.28
ZNF404Q494X3 AL354950.2-201ENST00000617939 290 ntBASIC0.79□□□□□ -2.28
ZNF404Q494X3 AC068792.1-201ENST00000621354 417 ntBASIC0.79□□□□□ -2.28
ZNF404Q494X3 FER-210ENST00000628534 558 ntTSL 5 BASIC0.79□□□□□ -2.28
ZNF404Q494X3 MIR6767-201ENST00000637302 66 ntBASIC0.79□□□□□ -2.28
ZNF404Q494X3 OR4G1P-203ENST00000641984 1631 ntBASIC0.78□□□□□ -2.28
ZNF404Q494X3 RNU1-93P-201ENST00000364704 169 ntBASIC0.78□□□□□ -2.28
ZNF404Q494X3 RNU5A-6P-201ENST00000384136 116 ntBASIC0.78□□□□□ -2.28
ZNF404Q494X3 RNU6-1031P-201ENST00000384773 107 ntBASIC0.78□□□□□ -2.28
ZNF404Q494X3 MIR320B2-201ENST00000408479 138 ntBASIC0.78□□□□□ -2.28
ZNF404Q494X3 CDK8P2-201ENST00000415020 547 ntBASIC0.78□□□□□ -2.28
ZNF404Q494X3 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.78□□□□□ -2.28
ZNF404Q494X3 TIMM9P3-201ENST00000428659 274 ntBASIC0.78□□□□□ -2.28
ZNF404Q494X3 AL606517.2-201ENST00000442855 241 ntBASIC0.78□□□□□ -2.28
ZNF404Q494X3 MTCO2P18-201ENST00000457151 658 ntBASIC0.78□□□□□ -2.28
ZNF404Q494X3 AC007215.1-201ENST00000464893 276 ntBASIC0.78□□□□□ -2.28
ZNF404Q494X3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.78□□□□□ -2.28
ZNF404Q494X3 AC103851.1-201ENST00000506833 274 ntBASIC0.78□□□□□ -2.28
ZNF404Q494X3 RNU6-165P-201ENST00000517170 99 ntBASIC0.78□□□□□ -2.28
ZNF404Q494X3 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.78□□□□□ -2.28
ZNF404Q494X3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
ZNF404Q494X3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.78□□□□□ -2.28
ZNF404Q494X3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.78□□□□□ -2.28
ZNF404Q494X3 SCOCP1-201ENST00000554676 349 ntBASIC0.78□□□□□ -2.28
ZNF404Q494X3 FGF7P1-201ENST00000582820 288 ntBASIC0.78□□□□□ -2.28
ZNF404Q494X3 MIR4424-201ENST00000585257 86 ntBASIC0.78□□□□□ -2.28
ZNF404Q494X3 MIR6857-201ENST00000613267 93 ntBASIC0.78□□□□□ -2.28
ZNF404Q494X3 AL078596.1-201ENST00000624856 447 ntBASIC0.78□□□□□ -2.28
ZNF404Q494X3 SCARNA4-201ENST00000629045 128 ntBASIC0.78□□□□□ -2.28
ZNF404Q494X3 Y_RNA.191-201ENST00000363972 113 ntBASIC0.77□□□□□ -2.29
ZNF404Q494X3 RNU6-1329P-201ENST00000365664 107 ntBASIC0.77□□□□□ -2.29
ZNF404Q494X3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.77□□□□□ -2.29
ZNF404Q494X3 AC016909.1-201ENST00000415916 166 ntBASIC0.77□□□□□ -2.29
ZNF404Q494X3 AC008134.1-201ENST00000420943 193 ntBASIC0.77□□□□□ -2.29
ZNF404Q494X3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.77□□□□□ -2.29
ZNF404Q494X3 MTND3P7-201ENST00000474435 343 ntBASIC0.77□□□□□ -2.29
ZNF404Q494X3 AF186996.7-201ENST00000492781 209 ntBASIC0.77□□□□□ -2.29
ZNF404Q494X3 SNORA31.10-201ENST00000516482 106 ntBASIC0.77□□□□□ -2.29
ZNF404Q494X3 RNU1-142P-201ENST00000516682 145 ntBASIC0.77□□□□□ -2.29
ZNF404Q494X3 CYCSP23-201ENST00000519781 313 ntBASIC0.77□□□□□ -2.29
ZNF404Q494X3 AL391646.1-201ENST00000603860 190 ntBASIC0.77□□□□□ -2.29
ZNF404Q494X3 AL391262.2-201ENST00000622466 494 ntBASIC0.77□□□□□ -2.29
ZNF404Q494X3 AC139792.3-201ENST00000623525 224 ntBASIC0.77□□□□□ -2.29
ZNF404Q494X3 AC008873.1-201ENST00000625051 138 ntBASIC0.77□□□□□ -2.29
ZNF404Q494X3 snoZ196.1-201ENST00000625269 89 ntBASIC0.77□□□□□ -2.29
ZNF404Q494X3 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.77□□□□□ -2.29
ZNF404Q494X3 OR5AK4P-201ENST00000635912 903 ntBASIC0.77□□□□□ -2.29
ZNF404Q494X3 AL391516.1-201ENST00000554380 2449 ntBASIC0.77□□□□□ -2.29
ZNF404Q494X3 Y_RNA.226-201ENST00000364337 114 ntBASIC0.76□□□□□ -2.29
ZNF404Q494X3 SNORD114-22-201ENST00000365423 72 ntBASIC0.76□□□□□ -2.29
ZNF404Q494X3 RN7SKP200-201ENST00000410564 320 ntBASIC0.76□□□□□ -2.29
ZNF404Q494X3 RN7SKP142-201ENST00000411236 328 ntBASIC0.76□□□□□ -2.29
ZNF404Q494X3 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.76□□□□□ -2.29
ZNF404Q494X3 AC073464.1-201ENST00000429823 534 ntBASIC0.76□□□□□ -2.29
ZNF404Q494X3 TPTE2P5-203ENST00000458118 728 ntBASIC0.76□□□□□ -2.29
ZNF404Q494X3 MTCO3P38-201ENST00000468910 766 ntBASIC0.76□□□□□ -2.29
ZNF404Q494X3 UBL5P1-201ENST00000507979 193 ntBASIC0.76□□□□□ -2.29
ZNF404Q494X3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.76□□□□□ -2.29
ZNF404Q494X3 RNU6-351P-201ENST00000516097 100 ntBASIC0.76□□□□□ -2.29
ZNF404Q494X3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
ZNF404Q494X3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.76□□□□□ -2.29
ZNF404Q494X3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.76□□□□□ -2.29
ZNF404Q494X3 AC087683.1-201ENST00000591187 441 ntBASIC0.76□□□□□ -2.29
ZNF404Q494X3 AC092747.3-201ENST00000603769 301 ntBASIC0.76□□□□□ -2.29
ZNF404Q494X3 AL357078.3-201ENST00000607528 618 ntBASIC0.76□□□□□ -2.29
ZNF404Q494X3 AL359075.3-201ENST00000613288 217 ntBASIC0.76□□□□□ -2.29
ZNF404Q494X3 AC103705.1-201ENST00000619013 241 ntBASIC0.76□□□□□ -2.29
ZNF404Q494X3 AC012676.2-201ENST00000619258 186 ntBASIC0.76□□□□□ -2.29
ZNF404Q494X3 Y_RNA.169-201ENST00000363745 96 ntBASIC0.75□□□□□ -2.29
ZNF404Q494X3 SNORD37.1-201ENST00000390968 65 ntBASIC0.75□□□□□ -2.29
ZNF404Q494X3 RNU6-1158P-201ENST00000391167 107 ntBASIC0.75□□□□□ -2.29
ZNF404Q494X3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.75□□□□□ -2.29
ZNF404Q494X3 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.75□□□□□ -2.29
ZNF404Q494X3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.75□□□□□ -2.29
ZNF404Q494X3 AC092991.1-201ENST00000477176 376 ntBASIC0.75□□□□□ -2.29
ZNF404Q494X3 RNU1-117P-201ENST00000517041 158 ntBASIC0.75□□□□□ -2.29
ZNF404Q494X3 SNORA70.22-201ENST00000517160 124 ntBASIC0.75□□□□□ -2.29
ZNF404Q494X3 AC025647.1-201ENST00000517879 253 ntBASIC0.75□□□□□ -2.29
ZNF404Q494X3 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.75□□□□□ -2.29
ZNF404Q494X3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.75□□□□□ -2.29
ZNF404Q494X3 AC022217.4-201ENST00000604389 163 ntBASIC0.75□□□□□ -2.29
ZNF404Q494X3 AC137590.2-201ENST00000619709 240 ntBASIC0.75□□□□□ -2.29
ZNF404Q494X3 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.75□□□□□ -2.29
ZNF404Q494X3 U6.108-201ENST00000637764 58 ntBASIC0.75□□□□□ -2.29
ZNF404Q494X3 ZNF204P-201ENST00000416749 2397 ntBASIC0.75□□□□□ -2.29
ZNF404Q494X3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.74□□□□□ -2.29
ZNF404Q494X3 RNU6-82P-201ENST00000363970 107 ntBASIC0.74□□□□□ -2.29
ZNF404Q494X3 RNU6-1240P-201ENST00000365155 104 ntBASIC0.74□□□□□ -2.29
ZNF404Q494X3 SNORA67.2-201ENST00000384300 149 ntBASIC0.74□□□□□ -2.29
ZNF404Q494X3 RNU6-348P-201ENST00000384386 107 ntBASIC0.74□□□□□ -2.29
ZNF404Q494X3 RNA5SP247-201ENST00000411181 105 ntBASIC0.74□□□□□ -2.29
ZNF404Q494X3 RAB28P5-201ENST00000427490 651 ntBASIC0.74□□□□□ -2.29
ZNF404Q494X3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.74□□□□□ -2.29
ZNF404Q494X3 RNU6-221P-201ENST00000459541 99 ntBASIC0.74□□□□□ -2.29
ZNF404Q494X3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.74□□□□□ -2.29
ZNF404Q494X3 RNU6-1038P-201ENST00000516516 104 ntBASIC0.74□□□□□ -2.29
ZNF404Q494X3 RNU6-344P-201ENST00000516635 111 ntBASIC0.74□□□□□ -2.29
ZNF404Q494X3 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.74□□□□□ -2.29
ZNF404Q494X3 MTND1P35-201ENST00000526739 508 ntBASIC0.74□□□□□ -2.29
ZNF404Q494X3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms