Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
CCDC27Q2M243 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC27Q2M243 MIR1248-201ENST00000629190 106 ntBASIC3.77□□□□□ -1.81
CCDC27Q2M243 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC27Q2M243 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC27Q2M243 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC27Q2M243 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CCDC27Q2M243 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC27Q2M243 MIR410-201ENST00000362222 80 ntBASIC3.76□□□□□ -1.81
CCDC27Q2M243 RNU4-90P-201ENST00000362773 141 ntBASIC3.76□□□□□ -1.81
CCDC27Q2M243 Y_RNA.84-201ENST00000363011 104 ntBASIC3.76□□□□□ -1.81
CCDC27Q2M243 RNU6-743P-201ENST00000364151 106 ntBASIC3.76□□□□□ -1.81
CCDC27Q2M243 Y_RNA.483-201ENST00000384380 101 ntBASIC3.76□□□□□ -1.81
CCDC27Q2M243 RNU6-505P-201ENST00000384427 107 ntBASIC3.76□□□□□ -1.81
CCDC27Q2M243 Y_RNA.618-201ENST00000410949 107 ntBASIC3.76□□□□□ -1.81
CCDC27Q2M243 RPL23AP36-201ENST00000413895 458 ntBASIC3.76□□□□□ -1.81
CCDC27Q2M243 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC27Q2M243 HMGN2P9-201ENST00000476875 229 ntBASIC3.76□□□□□ -1.81
CCDC27Q2M243 SRIP1-201ENST00000489235 288 ntBASIC3.76□□□□□ -1.81
CCDC27Q2M243 Y_RNA.668-201ENST00000516233 93 ntBASIC3.76□□□□□ -1.81
CCDC27Q2M243 RNA5SP490-201ENST00000517141 136 ntBASIC3.76□□□□□ -1.81
CCDC27Q2M243 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC27Q2M243 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
CCDC27Q2M243 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC27Q2M243 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC27Q2M243 snoU2_19.2-201ENST00000363024 80 ntBASIC3.75□□□□□ -1.81
CCDC27Q2M243 SNORD81.1-201ENST00000363064 77 ntBASIC3.75□□□□□ -1.81
CCDC27Q2M243 MIR215-201ENST00000384858 110 ntBASIC3.75□□□□□ -1.81
CCDC27Q2M243 MT-TW-201ENST00000387382 68 ntBASIC3.75□□□□□ -1.81
CCDC27Q2M243 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.75□□□□□ -1.81
CCDC27Q2M243 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC27Q2M243 AL109918.3-201ENST00000603072 338 ntBASIC3.75□□□□□ -1.81
CCDC27Q2M243 AC004467.1-201ENST00000615678 330 ntBASIC3.75□□□□□ -1.81
CCDC27Q2M243 AC008264.2-201ENST00000610193 3731 ntBASIC3.74□□□□□ -1.81
CCDC27Q2M243 SNORA26.7-201ENST00000391288 122 ntBASIC3.74□□□□□ -1.81
CCDC27Q2M243 RNU4-30P-201ENST00000410245 143 ntBASIC3.74□□□□□ -1.81
CCDC27Q2M243 RNU6-1203P-201ENST00000410703 110 ntBASIC3.74□□□□□ -1.81
CCDC27Q2M243 EEF1A1P41-201ENST00000414667 207 ntBASIC3.74□□□□□ -1.81
CCDC27Q2M243 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC27Q2M243 AC022018.1-201ENST00000430685 241 ntBASIC3.74□□□□□ -1.81
CCDC27Q2M243 RNA5SP385-201ENST00000515947 110 ntBASIC3.74□□□□□ -1.81
CCDC27Q2M243 RNU6-496P-201ENST00000516145 99 ntBASIC3.74□□□□□ -1.81
CCDC27Q2M243 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC27Q2M243 AC062037.2-201ENST00000610137 73 ntBASIC3.74□□□□□ -1.81
CCDC27Q2M243 U4atac.1-201ENST00000618345 95 ntBASIC3.74□□□□□ -1.81
CCDC27Q2M243 AC006001.4-201ENST00000622243 395 ntBASIC3.74□□□□□ -1.81
CCDC27Q2M243 AC091932.3-201ENST00000624223 323 ntBASIC3.74□□□□□ -1.81
CCDC27Q2M243 AC009487.2-201ENST00000420969 6821 ntBASIC3.74□□□□□ -1.81
CCDC27Q2M243 Y_RNA.331-201ENST00000365267 102 ntBASIC3.73□□□□□ -1.81
CCDC27Q2M243 U8.9-201ENST00000365667 134 ntBASIC3.73□□□□□ -1.81
CCDC27Q2M243 MIR512-1-201ENST00000384913 84 ntBASIC3.73□□□□□ -1.81
CCDC27Q2M243 HMGN2P18-201ENST00000450680 270 ntBASIC3.73□□□□□ -1.81
CCDC27Q2M243 AC005042.3-201ENST00000453230 174 ntBASIC3.73□□□□□ -1.81
CCDC27Q2M243 AC006006.1-201ENST00000603082 144 ntBASIC3.73□□□□□ -1.81
CCDC27Q2M243 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC27Q2M243 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC27Q2M243 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC27Q2M243 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC27Q2M243 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
CCDC27Q2M243 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC27Q2M243 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
CCDC27Q2M243 AC135776.4-201ENST00000624300 1904 ntBASIC3.72□□□□□ -1.81
CCDC27Q2M243 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC27Q2M243 RNU1-109P-201ENST00000383960 147 ntBASIC3.72□□□□□ -1.81
CCDC27Q2M243 MIR548B-201ENST00000385247 97 ntBASIC3.72□□□□□ -1.81
CCDC27Q2M243 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC27Q2M243 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.72□□□□□ -1.81
CCDC27Q2M243 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC27Q2M243 AL135938.1-201ENST00000443141 297 ntBASIC3.72□□□□□ -1.81
CCDC27Q2M243 AC016925.1-201ENST00000458303 298 ntBASIC3.72□□□□□ -1.81
CCDC27Q2M243 SCGB1D5P-201ENST00000515134 247 ntBASIC3.72□□□□□ -1.81
CCDC27Q2M243 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC27Q2M243 AC006380.1-201ENST00000603598 186 ntBASIC3.72□□□□□ -1.81
CCDC27Q2M243 AC022441.3-201ENST00000605737 136 ntBASIC3.72□□□□□ -1.81
CCDC27Q2M243 AC006386.2-201ENST00000624491 75 ntBASIC3.72□□□□□ -1.81
CCDC27Q2M243 AC012005.1-201ENST00000624575 75 ntBASIC3.72□□□□□ -1.81
CCDC27Q2M243 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC27Q2M243 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CCDC27Q2M243 RNU6-290P-201ENST00000365212 101 ntBASIC3.71□□□□□ -1.82
CCDC27Q2M243 AC107083.1-201ENST00000439643 279 ntBASIC3.71□□□□□ -1.82
CCDC27Q2M243 AC009238.1-201ENST00000442165 424 ntBASIC3.71□□□□□ -1.82
CCDC27Q2M243 AC009237.6-201ENST00000446969 424 ntBASIC3.71□□□□□ -1.82
CCDC27Q2M243 AC107222.1-201ENST00000510899 637 ntBASIC3.71□□□□□ -1.82
CCDC27Q2M243 RNU6-667P-201ENST00000517186 102 ntBASIC3.71□□□□□ -1.82
CCDC27Q2M243 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC27Q2M243 AC055872.1-201ENST00000570978 278 ntBASIC3.71□□□□□ -1.82
CCDC27Q2M243 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC27Q2M243 AC092593.1-201ENST00000515413 1815 ntBASIC3.7□□□□□ -1.82
CCDC27Q2M243 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC27Q2M243 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC27Q2M243 SNORA25B-201ENST00000365507 128 ntBASIC3.7□□□□□ -1.82
CCDC27Q2M243 RNU6-102P-201ENST00000384485 104 ntBASIC3.7□□□□□ -1.82
CCDC27Q2M243 RPL19P1-201ENST00000411635 428 ntBASIC3.7□□□□□ -1.82
CCDC27Q2M243 COTL1P1-201ENST00000422309 375 ntBASIC3.7□□□□□ -1.82
CCDC27Q2M243 AL137159.1-201ENST00000452808 512 ntBASIC3.7□□□□□ -1.82
CCDC27Q2M243 HSPE1P25-201ENST00000455484 251 ntBASIC3.7□□□□□ -1.82
CCDC27Q2M243 RNU7-57P-201ENST00000459540 60 ntBASIC3.7□□□□□ -1.82
CCDC27Q2M243 AP001486.1-201ENST00000463339 476 ntBASIC3.7□□□□□ -1.82
CCDC27Q2M243 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC27Q2M243 AP002001.1-203ENST00000534002 267 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms