Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 MTCYBP36-201ENST00000404146 440 ntBASIC0.15□□□□□ -2.39
RFX7Q2KHR2 MIR1912-201ENST00000410389 80 ntBASIC0.15□□□□□ -2.39
RFX7Q2KHR2 SNAP23P1-201ENST00000433229 246 ntBASIC0.15□□□□□ -2.39
RFX7Q2KHR2 LINC01399-202ENST00000458450 244 ntBASIC0.15□□□□□ -2.39
RFX7Q2KHR2 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.15□□□□□ -2.39
RFX7Q2KHR2 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.15□□□□□ -2.39
RFX7Q2KHR2 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.15□□□□□ -2.39
RFX7Q2KHR2 MIR5589-201ENST00000579442 60 ntBASIC0.15□□□□□ -2.39
RFX7Q2KHR2 MIR4768-201ENST00000585270 74 ntBASIC0.15□□□□□ -2.39
RFX7Q2KHR2 AC022217.4-201ENST00000604389 163 ntBASIC0.15□□□□□ -2.39
RFX7Q2KHR2 PRELID3BP2-201ENST00000605362 201 ntBASIC0.15□□□□□ -2.39
RFX7Q2KHR2 AC017083.3-201ENST00000609955 700 ntBASIC0.15□□□□□ -2.39
RFX7Q2KHR2 AC087588.2-201ENST00000617667 426 ntBASIC0.15□□□□□ -2.39
RFX7Q2KHR2 AC005562.2-201ENST00000618264 111 ntBASIC0.15□□□□□ -2.39
RFX7Q2KHR2 AL445984.1-201ENST00000637834 659 ntBASIC0.15□□□□□ -2.39
RFX7Q2KHR2 RNY1P12-201ENST00000364251 105 ntBASIC0.14□□□□□ -2.39
RFX7Q2KHR2 Y_RNA.330-201ENST00000365230 109 ntBASIC0.14□□□□□ -2.39
RFX7Q2KHR2 RNU6-793P-201ENST00000384233 104 ntBASIC0.14□□□□□ -2.39
RFX7Q2KHR2 RNU2-8P-201ENST00000410727 190 ntBASIC0.14□□□□□ -2.39
RFX7Q2KHR2 RNA5SP222-201ENST00000411039 105 ntBASIC0.14□□□□□ -2.39
RFX7Q2KHR2 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.14□□□□□ -2.39
RFX7Q2KHR2 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.14□□□□□ -2.39
RFX7Q2KHR2 EXOSC3P1-201ENST00000448649 500 ntBASIC0.14□□□□□ -2.39
RFX7Q2KHR2 AL031274.1-201ENST00000450334 232 ntBASIC0.14□□□□□ -2.39
RFX7Q2KHR2 SNORA70.12-201ENST00000516084 153 ntBASIC0.14□□□□□ -2.39
RFX7Q2KHR2 ZNF519P3-201ENST00000557158 1032 ntBASIC0.14□□□□□ -2.39
RFX7Q2KHR2 MIR4305-201ENST00000583252 102 ntBASIC0.14□□□□□ -2.39
RFX7Q2KHR2 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.14□□□□□ -2.39
RFX7Q2KHR2 AL359999.1-201ENST00000604513 294 ntBASIC0.14□□□□□ -2.39
RFX7Q2KHR2 AL136317.1-201ENST00000612653 226 ntBASIC0.14□□□□□ -2.39
RFX7Q2KHR2 AC068792.1-201ENST00000621354 417 ntBASIC0.14□□□□□ -2.39
RFX7Q2KHR2 U6.114-201ENST00000636407 96 ntBASIC0.14□□□□□ -2.39
RFX7Q2KHR2 AL450472.1-202ENST00000637286 180 ntBASIC0.14□□□□□ -2.39
RFX7Q2KHR2 RNU6-349P-201ENST00000362402 107 ntBASIC0.13□□□□□ -2.39
RFX7Q2KHR2 SNORA2.2-201ENST00000365473 135 ntBASIC0.13□□□□□ -2.39
RFX7Q2KHR2 RNU6-1257P-201ENST00000384625 110 ntBASIC0.13□□□□□ -2.39
RFX7Q2KHR2 RNU6-1067P-201ENST00000384752 107 ntBASIC0.13□□□□□ -2.39
RFX7Q2KHR2 Y_RNA.576-201ENST00000384781 102 ntBASIC0.13□□□□□ -2.39
RFX7Q2KHR2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
RFX7Q2KHR2 RNU6-757P-201ENST00000410334 100 ntBASIC0.13□□□□□ -2.39
RFX7Q2KHR2 RNU6-57P-201ENST00000411348 103 ntBASIC0.13□□□□□ -2.39
RFX7Q2KHR2 CDK8P2-201ENST00000415020 547 ntBASIC0.13□□□□□ -2.39
RFX7Q2KHR2 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.13□□□□□ -2.39
RFX7Q2KHR2 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.13□□□□□ -2.39
RFX7Q2KHR2 AC245047.8-201ENST00000456455 284 ntBASIC0.13□□□□□ -2.39
RFX7Q2KHR2 RNU6-1178P-201ENST00000516674 107 ntBASIC0.13□□□□□ -2.39
RFX7Q2KHR2 AC027419.1-201ENST00000522976 328 ntBASIC0.13□□□□□ -2.39
RFX7Q2KHR2 AP002001.1-203ENST00000534002 267 ntBASIC0.13□□□□□ -2.39
RFX7Q2KHR2 AC026470.2-201ENST00000561492 181 ntBASIC0.13□□□□□ -2.39
RFX7Q2KHR2 AC011195.1-201ENST00000578177 177 ntBASIC0.13□□□□□ -2.39
RFX7Q2KHR2 TCL6_2.1-201ENST00000615162 119 ntBASIC0.13□□□□□ -2.39
RFX7Q2KHR2 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.13□□□□□ -2.39
RFX7Q2KHR2 AC013437.2-201ENST00000639587 677 ntBASIC0.13□□□□□ -2.39
RFX7Q2KHR2 MTND4P5-201ENST00000435821 1374 ntBASIC0.13□□□□□ -2.39
RFX7Q2KHR2 AP000568.1-201ENST00000282964 442 ntBASIC0.12□□□□□ -2.39
RFX7Q2KHR2 RNU6-1305P-201ENST00000364353 104 ntBASIC0.12□□□□□ -2.39
RFX7Q2KHR2 Y_RNA.302-201ENST00000364997 102 ntBASIC0.12□□□□□ -2.39
RFX7Q2KHR2 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.12□□□□□ -2.39
RFX7Q2KHR2 MIR1265-201ENST00000408444 86 ntBASIC0.12□□□□□ -2.39
RFX7Q2KHR2 RPS27AP14-201ENST00000422868 454 ntBASIC0.12□□□□□ -2.39
RFX7Q2KHR2 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.12□□□□□ -2.39
RFX7Q2KHR2 AC004386.2-201ENST00000441858 148 ntBASIC0.12□□□□□ -2.39
RFX7Q2KHR2 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.12□□□□□ -2.39
RFX7Q2KHR2 AC067940.1-201ENST00000458411 300 ntBASIC0.12□□□□□ -2.39
RFX7Q2KHR2 RNU7-57P-201ENST00000459540 60 ntBASIC0.12□□□□□ -2.39
RFX7Q2KHR2 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.12□□□□□ -2.39
RFX7Q2KHR2 AC116562.3-201ENST00000506136 177 ntBASIC0.12□□□□□ -2.39
RFX7Q2KHR2 AC091874.1-201ENST00000511402 339 ntBASIC0.12□□□□□ -2.39
RFX7Q2KHR2 SNORA68.3-201ENST00000515906 83 ntBASIC0.12□□□□□ -2.39
RFX7Q2KHR2 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.12□□□□□ -2.39
RFX7Q2KHR2 AC068587.5-201ENST00000528506 175 ntBASIC0.12□□□□□ -2.39
RFX7Q2KHR2 AC103996.1-201ENST00000555468 102 ntBASIC0.12□□□□□ -2.39
RFX7Q2KHR2 AC234772.3-201ENST00000602277 528 ntBASIC0.12□□□□□ -2.39
RFX7Q2KHR2 AC013244.3-201ENST00000605614 388 ntBASIC0.12□□□□□ -2.39
RFX7Q2KHR2 SNORA28-201ENST00000606769 126 ntBASIC0.12□□□□□ -2.39
RFX7Q2KHR2 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.12□□□□□ -2.39
RFX7Q2KHR2 RNU6-1327P-201ENST00000365302 105 ntBASIC0.11□□□□□ -2.39
RFX7Q2KHR2 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
RFX7Q2KHR2 RNU6-533P-201ENST00000384144 107 ntBASIC0.11□□□□□ -2.39
RFX7Q2KHR2 MIR329-1-201ENST00000385028 80 ntBASIC0.11□□□□□ -2.39
RFX7Q2KHR2 RNU6-1186P-201ENST00000410429 97 ntBASIC0.11□□□□□ -2.39
RFX7Q2KHR2 RNA5SP504-201ENST00000410676 117 ntBASIC0.11□□□□□ -2.39
RFX7Q2KHR2 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.11□□□□□ -2.39
RFX7Q2KHR2 AC008134.1-201ENST00000420943 193 ntBASIC0.11□□□□□ -2.39
RFX7Q2KHR2 RPL23AP50-201ENST00000434149 455 ntBASIC0.11□□□□□ -2.39
RFX7Q2KHR2 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.11□□□□□ -2.39
RFX7Q2KHR2 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.11□□□□□ -2.39
RFX7Q2KHR2 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.11□□□□□ -2.39
RFX7Q2KHR2 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.11□□□□□ -2.39
RFX7Q2KHR2 AC004584.2-201ENST00000570407 410 ntBASIC0.11□□□□□ -2.39
RFX7Q2KHR2 MTND1P15-201ENST00000579262 949 ntBASIC0.11□□□□□ -2.39
RFX7Q2KHR2 AP001836.1-201ENST00000604675 523 ntBASIC0.11□□□□□ -2.39
RFX7Q2KHR2 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.11□□□□□ -2.39
RFX7Q2KHR2 RNU6-1287P-201ENST00000362914 107 ntBASIC0.1□□□□□ -2.39
RFX7Q2KHR2 Y_RNA.97-201ENST00000363094 102 ntBASIC0.1□□□□□ -2.39
RFX7Q2KHR2 RNU4-68P-201ENST00000364314 141 ntBASIC0.1□□□□□ -2.39
RFX7Q2KHR2 RNU6-1240P-201ENST00000365155 104 ntBASIC0.1□□□□□ -2.39
RFX7Q2KHR2 RNU6-827P-201ENST00000365553 106 ntBASIC0.1□□□□□ -2.39
RFX7Q2KHR2 Y_RNA.390-201ENST00000383932 102 ntBASIC0.1□□□□□ -2.39
RFX7Q2KHR2 RNU6-1060P-201ENST00000384664 107 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms