Protein–RNA interactions for Protein: Q15012

LAPTM4A, Lysosomal-associated transmembrane protein 4A, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4AQ15012 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LAPTM4AQ15012 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LAPTM4AQ15012 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LAPTM4AQ15012 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
LAPTM4AQ15012 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LAPTM4AQ15012 ICE2P2-201ENST00000483823 2787 ntBASIC4.06□□□□□ -1.76
LAPTM4AQ15012 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LAPTM4AQ15012 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LAPTM4AQ15012 SNORA71.2-201ENST00000364941 134 ntBASIC4.06□□□□□ -1.76
LAPTM4AQ15012 Y_RNA.440-201ENST00000384120 114 ntBASIC4.06□□□□□ -1.76
LAPTM4AQ15012 PTMAP5-201ENST00000393073 333 ntBASIC4.06□□□□□ -1.76
LAPTM4AQ15012 RN7SKP200-201ENST00000410564 320 ntBASIC4.06□□□□□ -1.76
LAPTM4AQ15012 SNORA74C-2-201ENST00000411179 201 ntBASIC4.06□□□□□ -1.76
LAPTM4AQ15012 AC004552.1-201ENST00000419089 348 ntBASIC4.06□□□□□ -1.76
LAPTM4AQ15012 AL590762.4-201ENST00000425885 253 ntBASIC4.06□□□□□ -1.76
LAPTM4AQ15012 ABCF2P2-201ENST00000450549 296 ntBASIC4.06□□□□□ -1.76
LAPTM4AQ15012 RPS26P3-201ENST00000470205 348 ntBASIC4.06□□□□□ -1.76
LAPTM4AQ15012 AC090543.2-201ENST00000483963 348 ntBASIC4.06□□□□□ -1.76
LAPTM4AQ15012 AC004057.1-201ENST00000485827 348 ntBASIC4.06□□□□□ -1.76
LAPTM4AQ15012 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC4.06□□□□□ -1.76
LAPTM4AQ15012 SCGB1D5P-201ENST00000515134 247 ntBASIC4.06□□□□□ -1.76
LAPTM4AQ15012 RNU6-1098P-201ENST00000516772 96 ntBASIC4.06□□□□□ -1.76
LAPTM4AQ15012 AC106785.1-201ENST00000565935 262 ntBASIC4.06□□□□□ -1.76
LAPTM4AQ15012 MIR4436B2-201ENST00000581415 91 ntBASIC4.06□□□□□ -1.76
LAPTM4AQ15012 MIR4436B1-201ENST00000583272 91 ntBASIC4.06□□□□□ -1.76
LAPTM4AQ15012 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.06□□□□□ -1.76
LAPTM4AQ15012 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.06□□□□□ -1.76
LAPTM4AQ15012 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LAPTM4AQ15012 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LAPTM4AQ15012 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LAPTM4AQ15012 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
LAPTM4AQ15012 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LAPTM4AQ15012 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
LAPTM4AQ15012 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LAPTM4AQ15012 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
LAPTM4AQ15012 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
LAPTM4AQ15012 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
LAPTM4AQ15012 Y_RNA.37-201ENST00000362606 108 ntBASIC4.05□□□□□ -1.76
LAPTM4AQ15012 RNU6-178P-201ENST00000384631 104 ntBASIC4.05□□□□□ -1.76
LAPTM4AQ15012 MIR1290-201ENST00000408735 78 ntBASIC4.05□□□□□ -1.76
LAPTM4AQ15012 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.05□□□□□ -1.76
LAPTM4AQ15012 RNU6-221P-201ENST00000459541 99 ntBASIC4.05□□□□□ -1.76
LAPTM4AQ15012 RNU7-25P-201ENST00000516544 62 ntBASIC4.05□□□□□ -1.76
LAPTM4AQ15012 RNU6-1231P-201ENST00000517185 103 ntBASIC4.05□□□□□ -1.76
LAPTM4AQ15012 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.05□□□□□ -1.76
LAPTM4AQ15012 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC4.05□□□□□ -1.76
LAPTM4AQ15012 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.05□□□□□ -1.76
LAPTM4AQ15012 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
LAPTM4AQ15012 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LAPTM4AQ15012 AC107027.3-201ENST00000565095 3473 ntBASIC4.05□□□□□ -1.76
LAPTM4AQ15012 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LAPTM4AQ15012 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LAPTM4AQ15012 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LAPTM4AQ15012 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
LAPTM4AQ15012 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.04□□□□□ -1.76
LAPTM4AQ15012 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
LAPTM4AQ15012 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
LAPTM4AQ15012 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
LAPTM4AQ15012 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LAPTM4AQ15012 MIRLET7A1-201ENST00000362295 80 ntBASIC4.04□□□□□ -1.76
LAPTM4AQ15012 snoU2_19.1-201ENST00000362361 80 ntBASIC4.04□□□□□ -1.76
LAPTM4AQ15012 RNU1-22P-201ENST00000363334 158 ntBASIC4.04□□□□□ -1.76
LAPTM4AQ15012 Y_RNA.532-201ENST00000384590 113 ntBASIC4.04□□□□□ -1.76
LAPTM4AQ15012 SNORD66.1-201ENST00000391230 76 ntBASIC4.04□□□□□ -1.76
LAPTM4AQ15012 MIR298-201ENST00000401212 88 ntBASIC4.04□□□□□ -1.76
LAPTM4AQ15012 RPL23AP48-201ENST00000406913 488 ntBASIC4.04□□□□□ -1.76
LAPTM4AQ15012 RNA5SP39-201ENST00000411245 120 ntBASIC4.04□□□□□ -1.76
LAPTM4AQ15012 TOMM22P1-201ENST00000418578 312 ntBASIC4.04□□□□□ -1.76
LAPTM4AQ15012 YME1L1P1-201ENST00000429435 297 ntBASIC4.04□□□□□ -1.76
LAPTM4AQ15012 MIR1270-201ENST00000459320 83 ntBASIC4.04□□□□□ -1.76
LAPTM4AQ15012 HMGN1P7-201ENST00000491722 313 ntBASIC4.04□□□□□ -1.76
LAPTM4AQ15012 AC025554.1-201ENST00000505641 188 ntBASIC4.04□□□□□ -1.76
LAPTM4AQ15012 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC4.04□□□□□ -1.76
LAPTM4AQ15012 UBL5P1-201ENST00000507979 193 ntBASIC4.04□□□□□ -1.76
LAPTM4AQ15012 RNA5SP497-201ENST00000516081 97 ntBASIC4.04□□□□□ -1.76
LAPTM4AQ15012 IGHVII-40-1-201ENST00000517316 58 ntBASIC4.04□□□□□ -1.76
LAPTM4AQ15012 AC024220.1-201ENST00000603675 484 ntBASIC4.04□□□□□ -1.76
LAPTM4AQ15012 AC020891.4-201ENST00000605745 93 ntBASIC4.04□□□□□ -1.76
LAPTM4AQ15012 DLEU2_5.2-201ENST00000610606 84 ntBASIC4.04□□□□□ -1.76
LAPTM4AQ15012 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
LAPTM4AQ15012 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
LAPTM4AQ15012 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LAPTM4AQ15012 AC091152.2-201ENST00000591628 2569 ntBASIC4.04□□□□□ -1.76
LAPTM4AQ15012 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.04□□□□□ -1.76
LAPTM4AQ15012 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LAPTM4AQ15012 RNA5SP388-201ENST00000362584 119 ntBASIC4.03□□□□□ -1.76
LAPTM4AQ15012 Y_RNA.253-201ENST00000364562 112 ntBASIC4.03□□□□□ -1.76
LAPTM4AQ15012 RNU6-217P-201ENST00000384164 104 ntBASIC4.03□□□□□ -1.76
LAPTM4AQ15012 MIR633-201ENST00000384821 98 ntBASIC4.03□□□□□ -1.76
LAPTM4AQ15012 RNU6-1307P-201ENST00000391012 103 ntBASIC4.03□□□□□ -1.76
LAPTM4AQ15012 RPL12P3-201ENST00000440080 396 ntBASIC4.03□□□□□ -1.76
LAPTM4AQ15012 RNA5SP228-201ENST00000516232 133 ntBASIC4.03□□□□□ -1.76
LAPTM4AQ15012 SNORA18.7-201ENST00000516910 131 ntBASIC4.03□□□□□ -1.76
LAPTM4AQ15012 RNU6-1096P-201ENST00000517089 102 ntBASIC4.03□□□□□ -1.76
LAPTM4AQ15012 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.03□□□□□ -1.76
LAPTM4AQ15012 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.03□□□□□ -1.76
LAPTM4AQ15012 MIR4700-201ENST00000578311 74 ntBASIC4.03□□□□□ -1.76
LAPTM4AQ15012 MIR432-201ENST00000606207 94 ntBASIC4.03□□□□□ -1.76
LAPTM4AQ15012 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
LAPTM4AQ15012 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms