Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AC003982.1-202ENST00000469928 248 ntBASIC3.25□□□□□ -1.89
SSRP1Q08945 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.25□□□□□ -1.89
SSRP1Q08945 RNU6-107P-201ENST00000516643 102 ntBASIC3.25□□□□□ -1.89
SSRP1Q08945 SNORA48.11-201ENST00000517015 89 ntBASIC3.25□□□□□ -1.89
SSRP1Q08945 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
SSRP1Q08945 ZNF861P-201ENST00000588126 639 ntBASIC3.25□□□□□ -1.89
SSRP1Q08945 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.25□□□□□ -1.89
SSRP1Q08945 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
SSRP1Q08945 SDR42E1P4-201ENST00000620894 481 ntBASIC3.25□□□□□ -1.89
SSRP1Q08945 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
SSRP1Q08945 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SSRP1Q08945 MTND5P6-201ENST00000422338 1798 ntBASIC3.25□□□□□ -1.89
SSRP1Q08945 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.25□□□□□ -1.89
SSRP1Q08945 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.24□□□□□ -1.89
SSRP1Q08945 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SSRP1Q08945 FAM35CP-201ENST00000554755 2470 ntBASIC3.24□□□□□ -1.89
SSRP1Q08945 AL391987.6-201ENST00000305671 199 ntBASIC3.24□□□□□ -1.89
SSRP1Q08945 Y_RNA.237-201ENST00000364439 102 ntBASIC3.24□□□□□ -1.89
SSRP1Q08945 Y_RNA.447-201ENST00000384184 113 ntBASIC3.24□□□□□ -1.89
SSRP1Q08945 Y_RNA.489-201ENST00000384410 101 ntBASIC3.24□□□□□ -1.89
SSRP1Q08945 Y_RNA.562-201ENST00000384695 113 ntBASIC3.24□□□□□ -1.89
SSRP1Q08945 MIR586-201ENST00000385035 97 ntBASIC3.24□□□□□ -1.89
SSRP1Q08945 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SSRP1Q08945 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.24□□□□□ -1.89
SSRP1Q08945 AC139712.2-201ENST00000424302 339 ntBASIC3.24□□□□□ -1.89
SSRP1Q08945 AC104332.2-201ENST00000429959 156 ntBASIC3.24□□□□□ -1.89
SSRP1Q08945 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.24□□□□□ -1.89
SSRP1Q08945 RNU7-14P-201ENST00000459331 62 ntBASIC3.24□□□□□ -1.89
SSRP1Q08945 RPL39P38-201ENST00000467018 153 ntBASIC3.24□□□□□ -1.89
SSRP1Q08945 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.24□□□□□ -1.89
SSRP1Q08945 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.24□□□□□ -1.89
SSRP1Q08945 RNU6-1338P-201ENST00000516328 91 ntBASIC3.24□□□□□ -1.89
SSRP1Q08945 DEFB108E-201ENST00000524692 240 ntBASIC3.24□□□□□ -1.89
SSRP1Q08945 AC055872.1-201ENST00000570978 278 ntBASIC3.24□□□□□ -1.89
SSRP1Q08945 MIR3117-201ENST00000584034 78 ntBASIC3.24□□□□□ -1.89
SSRP1Q08945 MIR4298-201ENST00000584380 73 ntBASIC3.24□□□□□ -1.89
SSRP1Q08945 AC022441.3-201ENST00000605737 136 ntBASIC3.24□□□□□ -1.89
SSRP1Q08945 AC127459.3-201ENST00000624328 466 ntBASIC3.24□□□□□ -1.89
SSRP1Q08945 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SSRP1Q08945 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.24□□□□□ -1.89
SSRP1Q08945 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.24□□□□□ -1.89
SSRP1Q08945 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SSRP1Q08945 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
SSRP1Q08945 MIR26A1-201ENST00000362205 77 ntBASIC3.23□□□□□ -1.89
SSRP1Q08945 RNU6-546P-201ENST00000383991 107 ntBASIC3.23□□□□□ -1.89
SSRP1Q08945 RNU6-1026P-201ENST00000384465 108 ntBASIC3.23□□□□□ -1.89
SSRP1Q08945 MIR627-201ENST00000384979 97 ntBASIC3.23□□□□□ -1.89
SSRP1Q08945 MIR300-201ENST00000401138 83 ntBASIC3.23□□□□□ -1.89
SSRP1Q08945 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.23□□□□□ -1.89
SSRP1Q08945 RNA5SP475-201ENST00000410568 110 ntBASIC3.23□□□□□ -1.89
SSRP1Q08945 RNU2-32P-201ENST00000411193 191 ntBASIC3.23□□□□□ -1.89
SSRP1Q08945 RPL23AP36-201ENST00000413895 458 ntBASIC3.23□□□□□ -1.89
SSRP1Q08945 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.23□□□□□ -1.89
SSRP1Q08945 NDUFB4P10-201ENST00000452541 359 ntBASIC3.23□□□□□ -1.89
SSRP1Q08945 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.23□□□□□ -1.89
SSRP1Q08945 AC107222.1-201ENST00000510899 637 ntBASIC3.23□□□□□ -1.89
SSRP1Q08945 AC109329.2-201ENST00000519658 482 ntBASIC3.23□□□□□ -1.89
SSRP1Q08945 AC022616.8-201ENST00000533569 253 ntBASIC3.23□□□□□ -1.89
SSRP1Q08945 AL109918.3-201ENST00000603072 338 ntBASIC3.23□□□□□ -1.89
SSRP1Q08945 AC004467.1-201ENST00000615678 330 ntBASIC3.23□□□□□ -1.89
SSRP1Q08945 AC091932.3-201ENST00000624223 323 ntBASIC3.23□□□□□ -1.89
SSRP1Q08945 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
SSRP1Q08945 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SSRP1Q08945 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
SSRP1Q08945 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SSRP1Q08945 Y_RNA.16-201ENST00000362421 102 ntBASIC3.22□□□□□ -1.89
SSRP1Q08945 U3.8-201ENST00000363675 217 ntBASIC3.22□□□□□ -1.89
SSRP1Q08945 RNU6-1305P-201ENST00000364353 104 ntBASIC3.22□□□□□ -1.89
SSRP1Q08945 Y_RNA.286-201ENST00000364813 102 ntBASIC3.22□□□□□ -1.89
SSRP1Q08945 Y_RNA.331-201ENST00000365267 102 ntBASIC3.22□□□□□ -1.89
SSRP1Q08945 AC003685.2-201ENST00000422795 395 ntBASIC3.22□□□□□ -1.89
SSRP1Q08945 TOMM22P2-201ENST00000430735 237 ntBASIC3.22□□□□□ -1.89
SSRP1Q08945 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.22□□□□□ -1.89
SSRP1Q08945 AL135938.1-201ENST00000443141 297 ntBASIC3.22□□□□□ -1.89
SSRP1Q08945 AC005042.3-201ENST00000453230 174 ntBASIC3.22□□□□□ -1.89
SSRP1Q08945 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.22□□□□□ -1.89
SSRP1Q08945 SNORA9.3-201ENST00000516383 129 ntBASIC3.22□□□□□ -1.89
SSRP1Q08945 AP002001.1-203ENST00000534002 267 ntBASIC3.22□□□□□ -1.89
SSRP1Q08945 MIR3605-201ENST00000583214 100 ntBASIC3.22□□□□□ -1.89
SSRP1Q08945 AC012433.1-201ENST00000588916 398 ntBASIC3.22□□□□□ -1.89
SSRP1Q08945 MIR6852-201ENST00000621699 66 ntBASIC3.22□□□□□ -1.89
SSRP1Q08945 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.22□□□□□ -1.89
SSRP1Q08945 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SSRP1Q08945 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.22□□□□□ -1.89
SSRP1Q08945 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.21□□□□□ -1.89
SSRP1Q08945 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.21□□□□□ -1.89
SSRP1Q08945 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SSRP1Q08945 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.21□□□□□ -1.9
SSRP1Q08945 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SSRP1Q08945 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SSRP1Q08945 Y_RNA.101-201ENST00000363154 102 ntBASIC3.21□□□□□ -1.9
SSRP1Q08945 RNU1-23P-201ENST00000363361 144 ntBASIC3.21□□□□□ -1.9
SSRP1Q08945 DYNLT3P1-201ENST00000378574 347 ntBASIC3.21□□□□□ -1.9
SSRP1Q08945 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SSRP1Q08945 SNORA53-201ENST00000391141 249 ntBASIC3.21□□□□□ -1.9
SSRP1Q08945 MIR1283-1-201ENST00000408494 87 ntBASIC3.21□□□□□ -1.9
SSRP1Q08945 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.21□□□□□ -1.9
SSRP1Q08945 AL445687.1-201ENST00000439946 251 ntBASIC3.21□□□□□ -1.9
SSRP1Q08945 Z96811.1-201ENST00000445880 108 ntBASIC3.21□□□□□ -1.9
SSRP1Q08945 HMGB3P17-201ENST00000504195 649 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms