Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 RNU6-545P-201ENST00000362681 104 ntBASIC3□□□□□ -1.93
IRF9Q00978 SNORD15B-201ENST00000384714 146 ntBASIC3□□□□□ -1.93
IRF9Q00978 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3□□□□□ -1.93
IRF9Q00978 MIR300-201ENST00000401138 83 ntBASIC3□□□□□ -1.93
IRF9Q00978 MIR1283-1-201ENST00000408494 87 ntBASIC3□□□□□ -1.93
IRF9Q00978 MIR1298-201ENST00000408783 112 ntBASIC3□□□□□ -1.93
IRF9Q00978 UBE2Q2P12-201ENST00000414573 204 ntBASIC3□□□□□ -1.93
IRF9Q00978 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3□□□□□ -1.93
IRF9Q00978 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3□□□□□ -1.93
IRF9Q00978 RPL23AP58-201ENST00000440453 469 ntBASIC3□□□□□ -1.93
IRF9Q00978 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3□□□□□ -1.93
IRF9Q00978 Y_RNA.700-201ENST00000516806 100 ntBASIC3□□□□□ -1.93
IRF9Q00978 AC109329.2-201ENST00000519658 482 ntBASIC3□□□□□ -1.93
IRF9Q00978 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
IRF9Q00978 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3□□□□□ -1.93
IRF9Q00978 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3□□□□□ -1.93
IRF9Q00978 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
IRF9Q00978 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3□□□□□ -1.93
IRF9Q00978 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
IRF9Q00978 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
IRF9Q00978 AL355596.1-201ENST00000565399 3996 ntBASIC3□□□□□ -1.93
IRF9Q00978 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3□□□□□ -1.93
IRF9Q00978 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
IRF9Q00978 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.99□□□□□ -1.93
IRF9Q00978 Y_RNA.117-201ENST00000363294 101 ntBASIC2.99□□□□□ -1.93
IRF9Q00978 RNU6-324P-201ENST00000363957 106 ntBASIC2.99□□□□□ -1.93
IRF9Q00978 Y_RNA.274-201ENST00000364714 101 ntBASIC2.99□□□□□ -1.93
IRF9Q00978 Y_RNA.785-201ENST00000384290 109 ntBASIC2.99□□□□□ -1.93
IRF9Q00978 MIR483-201ENST00000385070 76 ntBASIC2.99□□□□□ -1.93
IRF9Q00978 MIR95-201ENST00000385072 81 ntBASIC2.99□□□□□ -1.93
IRF9Q00978 U3.40-201ENST00000408706 208 ntBASIC2.99□□□□□ -1.93
IRF9Q00978 Y_RNA.590-201ENST00000410140 107 ntBASIC2.99□□□□□ -1.93
IRF9Q00978 RNA5SP274-201ENST00000410484 108 ntBASIC2.99□□□□□ -1.93
IRF9Q00978 RNU2-61P-201ENST00000411069 191 ntBASIC2.99□□□□□ -1.93
IRF9Q00978 MTND5P15-201ENST00000434246 349 ntBASIC2.99□□□□□ -1.93
IRF9Q00978 AC244505.4-201ENST00000434905 287 ntBASIC2.99□□□□□ -1.93
IRF9Q00978 AL161788.1-201ENST00000441805 169 ntBASIC2.99□□□□□ -1.93
IRF9Q00978 SSXP5-201ENST00000443473 287 ntBASIC2.99□□□□□ -1.93
IRF9Q00978 CYP2C59P-201ENST00000457790 269 ntBASIC2.99□□□□□ -1.93
IRF9Q00978 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.99□□□□□ -1.93
IRF9Q00978 AC109925.1-201ENST00000478069 331 ntBASIC2.99□□□□□ -1.93
IRF9Q00978 CKS1BP2-201ENST00000497342 240 ntBASIC2.99□□□□□ -1.93
IRF9Q00978 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.99□□□□□ -1.93
IRF9Q00978 ATP5EP1-201ENST00000510257 156 ntBASIC2.99□□□□□ -1.93
IRF9Q00978 RNU6-191P-201ENST00000516295 94 ntBASIC2.99□□□□□ -1.93
IRF9Q00978 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.99□□□□□ -1.93
IRF9Q00978 MIR5195-201ENST00000583555 115 ntBASIC2.99□□□□□ -1.93
IRF9Q00978 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.99□□□□□ -1.93
IRF9Q00978 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.99□□□□□ -1.93
IRF9Q00978 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.99□□□□□ -1.93
IRF9Q00978 AC092435.3-201ENST00000565538 3654 ntBASIC2.98□□□□□ -1.93
IRF9Q00978 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
IRF9Q00978 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
IRF9Q00978 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.98□□□□□ -1.93
IRF9Q00978 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
IRF9Q00978 Y_RNA.82-201ENST00000363000 102 ntBASIC2.98□□□□□ -1.93
IRF9Q00978 Y_RNA.92-201ENST00000363043 102 ntBASIC2.98□□□□□ -1.93
IRF9Q00978 Y_RNA.122-201ENST00000363331 96 ntBASIC2.98□□□□□ -1.93
IRF9Q00978 SNORD115-30-201ENST00000364117 82 ntBASIC2.98□□□□□ -1.93
IRF9Q00978 Y_RNA.235-201ENST00000364412 102 ntBASIC2.98□□□□□ -1.93
IRF9Q00978 Y_RNA.297-201ENST00000364950 91 ntBASIC2.98□□□□□ -1.93
IRF9Q00978 Y_RNA.306-201ENST00000365015 102 ntBASIC2.98□□□□□ -1.93
IRF9Q00978 Y_RNA.312-201ENST00000365089 102 ntBASIC2.98□□□□□ -1.93
IRF9Q00978 Y_RNA.322-201ENST00000365151 102 ntBASIC2.98□□□□□ -1.93
IRF9Q00978 Y_RNA.329-201ENST00000365209 107 ntBASIC2.98□□□□□ -1.93
IRF9Q00978 SNORA9-201ENST00000384215 133 ntBASIC2.98□□□□□ -1.93
IRF9Q00978 RNU6-1289P-201ENST00000384431 106 ntBASIC2.98□□□□□ -1.93
IRF9Q00978 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.98□□□□□ -1.93
IRF9Q00978 AC005326.1-201ENST00000429197 123 ntBASIC2.98□□□□□ -1.93
IRF9Q00978 Y_RNA.650-201ENST00000459002 102 ntBASIC2.98□□□□□ -1.93
IRF9Q00978 RNU6-436P-201ENST00000516171 114 ntBASIC2.98□□□□□ -1.93
IRF9Q00978 RNU6-965P-201ENST00000516721 96 ntBASIC2.98□□□□□ -1.93
IRF9Q00978 Y_RNA.777-201ENST00000516982 102 ntBASIC2.98□□□□□ -1.93
IRF9Q00978 MIR4753-201ENST00000585119 83 ntBASIC2.98□□□□□ -1.93
IRF9Q00978 Y_RNA.771-201ENST00000598668 102 ntBASIC2.98□□□□□ -1.93
IRF9Q00978 MIR7112-201ENST00000616126 65 ntBASIC2.98□□□□□ -1.93
IRF9Q00978 Y_RNA.789-201ENST00000622480 102 ntBASIC2.98□□□□□ -1.93
IRF9Q00978 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
IRF9Q00978 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
IRF9Q00978 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
IRF9Q00978 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.97□□□□□ -1.93
IRF9Q00978 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
IRF9Q00978 RNU6-662P-201ENST00000384253 104 ntBASIC2.97□□□□□ -1.93
IRF9Q00978 SNORA54-201ENST00000384281 123 ntBASIC2.97□□□□□ -1.93
IRF9Q00978 MIR181B1-201ENST00000385240 110 ntBASIC2.97□□□□□ -1.93
IRF9Q00978 SNORA48.8-201ENST00000391324 134 ntBASIC2.97□□□□□ -1.93
IRF9Q00978 RNA5SP120-201ENST00000410900 112 ntBASIC2.97□□□□□ -1.93
IRF9Q00978 RNU6-651P-201ENST00000411040 105 ntBASIC2.97□□□□□ -1.93
IRF9Q00978 AC074290.1-201ENST00000448883 135 ntBASIC2.97□□□□□ -1.93
IRF9Q00978 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.97□□□□□ -1.93
IRF9Q00978 AC114982.1-201ENST00000469402 321 ntBASIC2.97□□□□□ -1.93
IRF9Q00978 RN7SL807P-201ENST00000470923 297 ntBASIC2.97□□□□□ -1.93
IRF9Q00978 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.97□□□□□ -1.93
IRF9Q00978 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.97□□□□□ -1.93
IRF9Q00978 SNORA74D-201ENST00000516404 141 ntBASIC2.97□□□□□ -1.93
IRF9Q00978 Y_RNA.679-201ENST00000516416 91 ntBASIC2.97□□□□□ -1.93
IRF9Q00978 MIR3200-201ENST00000580767 85 ntBASIC2.97□□□□□ -1.93
IRF9Q00978 MIR4282-201ENST00000583613 67 ntBASIC2.97□□□□□ -1.93
IRF9Q00978 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
IRF9Q00978 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms