Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 SNORD11B-201ENST00000607707 90 ntBASIC2.26□□□□□ -2.05
CLDN2P57739 MIR3670-4-201ENST00000612260 65 ntBASIC2.26□□□□□ -2.05
CLDN2P57739 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CLDN2P57739 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.25□□□□□ -2.05
CLDN2P57739 VTRNA1-1-201ENST00000363120 99 ntBASIC2.25□□□□□ -2.05
CLDN2P57739 RNU6-879P-201ENST00000364328 108 ntBASIC2.25□□□□□ -2.05
CLDN2P57739 AC117470.1-201ENST00000381974 330 ntBASIC2.25□□□□□ -2.05
CLDN2P57739 RNU1-148P-201ENST00000384472 162 ntBASIC2.25□□□□□ -2.05
CLDN2P57739 MIR221-201ENST00000385135 110 ntBASIC2.25□□□□□ -2.05
CLDN2P57739 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
CLDN2P57739 AC004866.1-201ENST00000411748 78 ntBASIC2.25□□□□□ -2.05
CLDN2P57739 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.25□□□□□ -2.05
CLDN2P57739 RPS12P2-201ENST00000439728 269 ntBASIC2.25□□□□□ -2.05
CLDN2P57739 HMGN2P18-201ENST00000450680 270 ntBASIC2.25□□□□□ -2.05
CLDN2P57739 AC007395.1-201ENST00000451333 677 ntBASIC2.25□□□□□ -2.05
CLDN2P57739 U8.22-201ENST00000459141 133 ntBASIC2.25□□□□□ -2.05
CLDN2P57739 AL163540.1-201ENST00000485382 386 ntBASIC2.25□□□□□ -2.05
CLDN2P57739 Y_RNA.683-201ENST00000516508 93 ntBASIC2.25□□□□□ -2.05
CLDN2P57739 SNORA40.14-201ENST00000516543 86 ntBASIC2.25□□□□□ -2.05
CLDN2P57739 RNU6-1153P-201ENST00000516760 105 ntBASIC2.25□□□□□ -2.05
CLDN2P57739 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.25□□□□□ -2.05
CLDN2P57739 AC006600.1-201ENST00000572529 153 ntBASIC2.25□□□□□ -2.05
CLDN2P57739 AC026271.5-201ENST00000577873 130 ntBASIC2.25□□□□□ -2.05
CLDN2P57739 AC125232.2-201ENST00000592457 143 ntBASIC2.25□□□□□ -2.05
CLDN2P57739 AL356055.1-201ENST00000602528 446 ntBASIC2.25□□□□□ -2.05
CLDN2P57739 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CLDN2P57739 RNU6-1301P-201ENST00000362724 104 ntBASIC2.24□□□□□ -2.05
CLDN2P57739 Y_RNA.202-201ENST00000364083 110 ntBASIC2.24□□□□□ -2.05
CLDN2P57739 RNU6-743P-201ENST00000364151 106 ntBASIC2.24□□□□□ -2.05
CLDN2P57739 RNY3P11-201ENST00000364153 102 ntBASIC2.24□□□□□ -2.05
CLDN2P57739 RNU6-438P-201ENST00000365561 103 ntBASIC2.24□□□□□ -2.05
CLDN2P57739 RNU6-308P-201ENST00000390957 107 ntBASIC2.24□□□□□ -2.05
CLDN2P57739 EDDM3CP-201ENST00000415977 425 ntBASIC2.24□□□□□ -2.05
CLDN2P57739 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.24□□□□□ -2.05
CLDN2P57739 AL445305.1-201ENST00000432577 575 ntBASIC2.24□□□□□ -2.05
CLDN2P57739 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.24□□□□□ -2.05
CLDN2P57739 AL137159.1-201ENST00000452808 512 ntBASIC2.24□□□□□ -2.05
CLDN2P57739 AC016925.1-201ENST00000458303 298 ntBASIC2.24□□□□□ -2.05
CLDN2P57739 ATP5EP1-201ENST00000510257 156 ntBASIC2.24□□□□□ -2.05
CLDN2P57739 SNORA4.4-201ENST00000515921 135 ntBASIC2.24□□□□□ -2.05
CLDN2P57739 RN7SKP49-201ENST00000516675 260 ntBASIC2.24□□□□□ -2.05
CLDN2P57739 IGKV3-31-201ENST00000523109 329 ntBASIC2.24□□□□□ -2.05
CLDN2P57739 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.24□□□□□ -2.05
CLDN2P57739 MIR3126-201ENST00000577443 74 ntBASIC2.24□□□□□ -2.05
CLDN2P57739 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.24□□□□□ -2.05
CLDN2P57739 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CLDN2P57739 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
CLDN2P57739 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CLDN2P57739 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.23□□□□□ -2.05
CLDN2P57739 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.23□□□□□ -2.05
CLDN2P57739 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.23□□□□□ -2.05
CLDN2P57739 Y_RNA.80-201ENST00000362996 102 ntBASIC2.23□□□□□ -2.05
CLDN2P57739 RNY3P4-201ENST00000384428 101 ntBASIC2.23□□□□□ -2.05
CLDN2P57739 Y_RNA.526-201ENST00000384572 110 ntBASIC2.23□□□□□ -2.05
CLDN2P57739 SNORA64-201ENST00000384674 134 ntBASIC2.23□□□□□ -2.05
CLDN2P57739 MIR329-1-201ENST00000385028 80 ntBASIC2.23□□□□□ -2.05
CLDN2P57739 MIR586-201ENST00000385035 97 ntBASIC2.23□□□□□ -2.05
CLDN2P57739 MIR1283-1-201ENST00000408494 87 ntBASIC2.23□□□□□ -2.05
CLDN2P57739 RNA5SP181-201ENST00000410246 98 ntBASIC2.23□□□□□ -2.05
CLDN2P57739 RNU6-1001P-201ENST00000411265 100 ntBASIC2.23□□□□□ -2.05
CLDN2P57739 AL160004.2-201ENST00000432935 350 ntBASIC2.23□□□□□ -2.05
CLDN2P57739 AC245102.2-201ENST00000448956 180 ntBASIC2.23□□□□□ -2.05
CLDN2P57739 CHEK2P4-201ENST00000450340 246 ntBASIC2.23□□□□□ -2.05
CLDN2P57739 PRELID3BP1-201ENST00000457142 540 ntBASIC2.23□□□□□ -2.05
CLDN2P57739 AC091179.3-201ENST00000474761 144 ntBASIC2.23□□□□□ -2.05
CLDN2P57739 AC093852.1-201ENST00000503587 266 ntBASIC2.23□□□□□ -2.05
CLDN2P57739 AC093259.1-201ENST00000509755 300 ntBASIC2.23□□□□□ -2.05
CLDN2P57739 RRN3P3-201ENST00000549207 578 ntBASIC2.23□□□□□ -2.05
CLDN2P57739 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.23□□□□□ -2.05
CLDN2P57739 SNORD58B-201ENST00000607313 66 ntBASIC2.23□□□□□ -2.05
CLDN2P57739 AL137847.3-201ENST00000611521 109 ntBASIC2.23□□□□□ -2.05
CLDN2P57739 AC007485.1-201ENST00000616755 206 ntBASIC2.23□□□□□ -2.05
CLDN2P57739 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.23□□□□□ -2.05
CLDN2P57739 AC008873.1-201ENST00000625051 138 ntBASIC2.23□□□□□ -2.05
CLDN2P57739 AC068205.3-201ENST00000636385 468 ntBASIC2.23□□□□□ -2.05
CLDN2P57739 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CLDN2P57739 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CLDN2P57739 MTND5P35-201ENST00000557537 1720 ntBASIC2.22□□□□□ -2.05
CLDN2P57739 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CLDN2P57739 Y_RNA.27-201ENST00000362540 103 ntBASIC2.22□□□□□ -2.05
CLDN2P57739 Y_RNA.148-201ENST00000363557 117 ntBASIC2.22□□□□□ -2.05
CLDN2P57739 Y_RNA.332-201ENST00000365271 113 ntBASIC2.22□□□□□ -2.05
CLDN2P57739 RNU6-1145P-201ENST00000384246 107 ntBASIC2.22□□□□□ -2.05
CLDN2P57739 SNORA67.3-201ENST00000384366 140 ntBASIC2.22□□□□□ -2.05
CLDN2P57739 Y_RNA.595-201ENST00000410403 105 ntBASIC2.22□□□□□ -2.05
CLDN2P57739 AC096644.2-201ENST00000429278 159 ntBASIC2.22□□□□□ -2.05
CLDN2P57739 IFNA11P-201ENST00000446352 526 ntBASIC2.22□□□□□ -2.05
CLDN2P57739 AC074290.1-201ENST00000448883 135 ntBASIC2.22□□□□□ -2.05
CLDN2P57739 AC112492.4-201ENST00000456549 352 ntBASIC2.22□□□□□ -2.05
CLDN2P57739 AC114982.1-201ENST00000469402 321 ntBASIC2.22□□□□□ -2.05
CLDN2P57739 RNA5SP137-201ENST00000516833 135 ntBASIC2.22□□□□□ -2.05
CLDN2P57739 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.22□□□□□ -2.05
CLDN2P57739 MIR5188-201ENST00000583467 113 ntBASIC2.22□□□□□ -2.05
CLDN2P57739 MIR4753-201ENST00000585119 83 ntBASIC2.22□□□□□ -2.05
CLDN2P57739 MIR7843-201ENST00000622274 79 ntBASIC2.22□□□□□ -2.05
CLDN2P57739 MIR6766-201ENST00000622641 72 ntBASIC2.22□□□□□ -2.05
CLDN2P57739 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.22□□□□□ -2.05
CLDN2P57739 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
CLDN2P57739 AC005592.1-201ENST00000566527 1640 ntBASIC2.21□□□□□ -2.06
CLDN2P57739 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms