Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 RN7SKP49-201ENST00000516675 260 ntBASIC0.75□□□□□ -2.29
CLDN8P56748 RNU6-197P-201ENST00000516680 100 ntBASIC0.75□□□□□ -2.29
CLDN8P56748 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.75□□□□□ -2.29
CLDN8P56748 AL121579.1-201ENST00000555129 305 ntBASIC0.75□□□□□ -2.29
CLDN8P56748 MIR3913-1-201ENST00000577744 102 ntBASIC0.75□□□□□ -2.29
CLDN8P56748 MIR4698-201ENST00000577795 80 ntBASIC0.75□□□□□ -2.29
CLDN8P56748 AL357312.1-201ENST00000603879 298 ntBASIC0.75□□□□□ -2.29
CLDN8P56748 SNORA28-201ENST00000606769 126 ntBASIC0.75□□□□□ -2.29
CLDN8P56748 SCARNA4-201ENST00000629045 128 ntBASIC0.75□□□□□ -2.29
CLDN8P56748 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
CLDN8P56748 RNU6-1266P-201ENST00000362794 105 ntBASIC0.74□□□□□ -2.29
CLDN8P56748 Y_RNA.124-201ENST00000363339 93 ntBASIC0.74□□□□□ -2.29
CLDN8P56748 MIR942-201ENST00000401111 86 ntBASIC0.74□□□□□ -2.29
CLDN8P56748 AL451046.2-201ENST00000403074 277 ntBASIC0.74□□□□□ -2.29
CLDN8P56748 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.74□□□□□ -2.29
CLDN8P56748 RNU6-248P-201ENST00000410720 107 ntBASIC0.74□□□□□ -2.29
CLDN8P56748 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.74□□□□□ -2.29
CLDN8P56748 AC244505.5-201ENST00000443639 207 ntBASIC0.74□□□□□ -2.29
CLDN8P56748 RNU7-180P-201ENST00000459240 63 ntBASIC0.74□□□□□ -2.29
CLDN8P56748 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.74□□□□□ -2.29
CLDN8P56748 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.74□□□□□ -2.29
CLDN8P56748 RNA5SP458-201ENST00000516188 119 ntBASIC0.74□□□□□ -2.29
CLDN8P56748 RNU6-759P-201ENST00000516740 103 ntBASIC0.74□□□□□ -2.29
CLDN8P56748 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.74□□□□□ -2.29
CLDN8P56748 AL590705.4-201ENST00000532209 134 ntBASIC0.74□□□□□ -2.29
CLDN8P56748 MIR3973-201ENST00000579824 107 ntBASIC0.74□□□□□ -2.29
CLDN8P56748 MIR5583-1-201ENST00000580941 59 ntBASIC0.74□□□□□ -2.29
CLDN8P56748 MTATP6P3-201ENST00000581686 676 ntBASIC0.74□□□□□ -2.29
CLDN8P56748 AC004223.2-201ENST00000590309 544 ntBASIC0.74□□□□□ -2.29
CLDN8P56748 AL359821.1-201ENST00000605519 182 ntBASIC0.74□□□□□ -2.29
CLDN8P56748 MIR6715A-201ENST00000615929 79 ntBASIC0.74□□□□□ -2.29
CLDN8P56748 AC005609.4-201ENST00000625071 447 ntBASIC0.74□□□□□ -2.29
CLDN8P56748 HSBP1P2-201ENST00000299671 229 ntBASIC0.73□□□□□ -2.29
CLDN8P56748 RNU6-199P-201ENST00000362954 107 ntBASIC0.73□□□□□ -2.29
CLDN8P56748 RNU6-1186P-201ENST00000410429 97 ntBASIC0.73□□□□□ -2.29
CLDN8P56748 RPS3AP1-201ENST00000413190 320 ntBASIC0.73□□□□□ -2.29
CLDN8P56748 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.73□□□□□ -2.29
CLDN8P56748 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.73□□□□□ -2.29
CLDN8P56748 RPS4XP11-201ENST00000446897 772 ntBASIC0.73□□□□□ -2.29
CLDN8P56748 SNRPGP9-201ENST00000456025 225 ntBASIC0.73□□□□□ -2.29
CLDN8P56748 HMGB1P29-201ENST00000505659 499 ntBASIC0.73□□□□□ -2.29
CLDN8P56748 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.73□□□□□ -2.29
CLDN8P56748 RN7SKP265-201ENST00000516448 223 ntBASIC0.73□□□□□ -2.29
CLDN8P56748 RNU1-117P-201ENST00000517041 158 ntBASIC0.73□□□□□ -2.29
CLDN8P56748 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.73□□□□□ -2.29
CLDN8P56748 AC104984.5-201ENST00000586878 94 ntBASIC0.73□□□□□ -2.29
CLDN8P56748 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.73□□□□□ -2.29
CLDN8P56748 AC022432.1-201ENST00000595739 310 ntBASIC0.73□□□□□ -2.29
CLDN8P56748 SNORD11B-201ENST00000607707 90 ntBASIC0.73□□□□□ -2.29
CLDN8P56748 AC027449.1-201ENST00000608890 407 ntBASIC0.73□□□□□ -2.29
CLDN8P56748 FER-210ENST00000628534 558 ntTSL 5 BASIC0.73□□□□□ -2.29
CLDN8P56748 U6.108-201ENST00000637764 58 ntBASIC0.73□□□□□ -2.29
CLDN8P56748 OR4G1P-203ENST00000641984 1631 ntBASIC0.73□□□□□ -2.29
CLDN8P56748 RNU4-21P-201ENST00000362802 126 ntBASIC0.72□□□□□ -2.29
CLDN8P56748 RNU6-1317P-201ENST00000364582 104 ntBASIC0.72□□□□□ -2.29
CLDN8P56748 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.72□□□□□ -2.29
CLDN8P56748 AL606923.1-201ENST00000406616 190 ntBASIC0.72□□□□□ -2.29
CLDN8P56748 AL606490.4-201ENST00000423117 127 ntBASIC0.72□□□□□ -2.29
CLDN8P56748 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.72□□□□□ -2.29
CLDN8P56748 BET1P1-201ENST00000482276 359 ntBASIC0.72□□□□□ -2.29
CLDN8P56748 HMGN1P7-201ENST00000491722 313 ntBASIC0.72□□□□□ -2.29
CLDN8P56748 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.72□□□□□ -2.29
CLDN8P56748 RNU6-947P-201ENST00000516264 106 ntBASIC0.72□□□□□ -2.29
CLDN8P56748 RNU6-113P-201ENST00000516653 101 ntBASIC0.72□□□□□ -2.29
CLDN8P56748 AC109347.2-201ENST00000610220 349 ntBASIC0.72□□□□□ -2.29
CLDN8P56748 AC139792.3-201ENST00000623525 224 ntBASIC0.72□□□□□ -2.29
CLDN8P56748 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.72□□□□□ -2.29
CLDN8P56748 MIR6866-201ENST00000638146 69 ntBASIC0.72□□□□□ -2.29
CLDN8P56748 ZNF204P-201ENST00000416749 2397 ntBASIC0.71□□□□□ -2.3
CLDN8P56748 RNU6-996P-201ENST00000365438 107 ntBASIC0.71□□□□□ -2.3
CLDN8P56748 SNORA67.2-201ENST00000384300 149 ntBASIC0.71□□□□□ -2.3
CLDN8P56748 MIR100-201ENST00000385259 80 ntBASIC0.71□□□□□ -2.3
CLDN8P56748 MT-TH-201ENST00000387441 69 ntBASIC0.71□□□□□ -2.3
CLDN8P56748 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.71□□□□□ -2.3
CLDN8P56748 AC114482.1-201ENST00000418010 247 ntBASIC0.71□□□□□ -2.3
CLDN8P56748 AC005002.2-201ENST00000438228 269 ntBASIC0.71□□□□□ -2.3
CLDN8P56748 MTND1P27-201ENST00000451117 902 ntBASIC0.71□□□□□ -2.3
CLDN8P56748 RNU6-189P-201ENST00000516120 101 ntBASIC0.71□□□□□ -2.3
CLDN8P56748 RNU7-99P-201ENST00000516271 62 ntBASIC0.71□□□□□ -2.3
CLDN8P56748 RNA5SP54-201ENST00000516951 92 ntBASIC0.71□□□□□ -2.3
CLDN8P56748 MTND1P35-201ENST00000526739 508 ntBASIC0.71□□□□□ -2.3
CLDN8P56748 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.71□□□□□ -2.3
CLDN8P56748 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
CLDN8P56748 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.71□□□□□ -2.3
CLDN8P56748 AC090049.2-201ENST00000550377 109 ntBASIC0.71□□□□□ -2.3
CLDN8P56748 SCOCP1-201ENST00000554676 349 ntBASIC0.71□□□□□ -2.3
CLDN8P56748 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.71□□□□□ -2.3
CLDN8P56748 RMST_3.1-201ENST00000611651 109 ntBASIC0.71□□□□□ -2.3
CLDN8P56748 HULC.1-201ENST00000612720 240 ntBASIC0.71□□□□□ -2.3
CLDN8P56748 AC007494.3-201ENST00000624660 743 ntBASIC0.71□□□□□ -2.3
CLDN8P56748 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
CLDN8P56748 AC008163.1-202ENST00000636004 2889 ntBASIC0.71□□□□□ -2.3
CLDN8P56748 MIR373-201ENST00000362273 69 ntBASIC0.7□□□□□ -2.3
CLDN8P56748 RNU6-245P-201ENST00000384020 107 ntBASIC0.7□□□□□ -2.3
CLDN8P56748 MIR653-201ENST00000385279 96 ntBASIC0.7□□□□□ -2.3
CLDN8P56748 Y_RNA.595-201ENST00000410403 105 ntBASIC0.7□□□□□ -2.3
CLDN8P56748 AC006461.1-201ENST00000412637 326 ntBASIC0.7□□□□□ -2.3
CLDN8P56748 MTCYBP8-201ENST00000422855 651 ntBASIC0.7□□□□□ -2.3
CLDN8P56748 AL365203.2-201ENST00000423444 196 ntBASIC0.7□□□□□ -2.3
CLDN8P56748 MTCO2P11-201ENST00000431069 680 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms