Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RNU6-121P-201ENST00000410525 99 ntBASIC2.3□□□□□ -2.04
CDH12P55289 RNU2-52P-201ENST00000410680 190 ntBASIC2.3□□□□□ -2.04
CDH12P55289 RNU2-32P-201ENST00000411193 191 ntBASIC2.3□□□□□ -2.04
CDH12P55289 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.3□□□□□ -2.04
CDH12P55289 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDH12P55289 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.3□□□□□ -2.04
CDH12P55289 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.3□□□□□ -2.04
CDH12P55289 CKS1BP2-201ENST00000497342 240 ntBASIC2.3□□□□□ -2.04
CDH12P55289 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.3□□□□□ -2.04
CDH12P55289 ATP5EP1-201ENST00000510257 156 ntBASIC2.3□□□□□ -2.04
CDH12P55289 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.3□□□□□ -2.04
CDH12P55289 RNA5SP402-201ENST00000517148 110 ntBASIC2.3□□□□□ -2.04
CDH12P55289 AK6P2-201ENST00000549020 471 ntBASIC2.3□□□□□ -2.04
CDH12P55289 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.3□□□□□ -2.04
CDH12P55289 GTF3AP2-201ENST00000557014 266 ntBASIC2.3□□□□□ -2.04
CDH12P55289 AC136932.1-201ENST00000574771 208 ntBASIC2.3□□□□□ -2.04
CDH12P55289 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.3□□□□□ -2.04
CDH12P55289 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.3□□□□□ -2.04
CDH12P55289 MIR1248-201ENST00000629190 106 ntBASIC2.3□□□□□ -2.04
CDH12P55289 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDH12P55289 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CDH12P55289 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.3□□□□□ -2.04
CDH12P55289 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CDH12P55289 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CDH12P55289 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CDH12P55289 Y_RNA.19-201ENST00000362462 99 ntBASIC2.29□□□□□ -2.04
CDH12P55289 Y_RNA.64-201ENST00000362845 102 ntBASIC2.29□□□□□ -2.04
CDH12P55289 Y_RNA.143-201ENST00000363520 106 ntBASIC2.29□□□□□ -2.04
CDH12P55289 Y_RNA.149-201ENST00000363558 117 ntBASIC2.29□□□□□ -2.04
CDH12P55289 Y_RNA.176-201ENST00000363815 109 ntBASIC2.29□□□□□ -2.04
CDH12P55289 Y_RNA.183-201ENST00000363882 113 ntBASIC2.29□□□□□ -2.04
CDH12P55289 Y_RNA.222-201ENST00000364264 102 ntBASIC2.29□□□□□ -2.04
CDH12P55289 RNU6-546P-201ENST00000383991 107 ntBASIC2.29□□□□□ -2.04
CDH12P55289 RNU6-574P-201ENST00000384265 107 ntBASIC2.29□□□□□ -2.04
CDH12P55289 RNU2-20P-201ENST00000410425 191 ntBASIC2.29□□□□□ -2.04
CDH12P55289 RNU2-48P-201ENST00000410694 191 ntBASIC2.29□□□□□ -2.04
CDH12P55289 RNU2-63P-201ENST00000410792 194 ntBASIC2.29□□□□□ -2.04
CDH12P55289 ELOCP21-201ENST00000412558 336 ntBASIC2.29□□□□□ -2.04
CDH12P55289 DYNLT3P2-201ENST00000442517 295 ntBASIC2.29□□□□□ -2.04
CDH12P55289 AC104389.3-201ENST00000445629 235 ntBASIC2.29□□□□□ -2.04
CDH12P55289 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.29□□□□□ -2.04
CDH12P55289 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.29□□□□□ -2.04
CDH12P55289 RPS23P5-201ENST00000495419 428 ntBASIC2.29□□□□□ -2.04
CDH12P55289 RNU6-408P-201ENST00000515910 100 ntBASIC2.29□□□□□ -2.04
CDH12P55289 RNY3P15-201ENST00000516297 97 ntBASIC2.29□□□□□ -2.04
CDH12P55289 RNU5F-4P-201ENST00000516581 114 ntBASIC2.29□□□□□ -2.04
CDH12P55289 RNU1-117P-201ENST00000517041 158 ntBASIC2.29□□□□□ -2.04
CDH12P55289 RN7SKP40-201ENST00000517211 242 ntBASIC2.29□□□□□ -2.04
CDH12P55289 AL355297.2-201ENST00000604792 129 ntBASIC2.29□□□□□ -2.04
CDH12P55289 AL033523.1-201ENST00000605153 153 ntBASIC2.29□□□□□ -2.04
CDH12P55289 RPL17P51-201ENST00000605218 238 ntBASIC2.29□□□□□ -2.04
CDH12P55289 Y_RNA.772-201ENST00000606692 102 ntBASIC2.29□□□□□ -2.04
CDH12P55289 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CDH12P55289 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.29□□□□□ -2.04
CDH12P55289 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CDH12P55289 AC135776.4-201ENST00000624300 1904 ntBASIC2.29□□□□□ -2.04
CDH12P55289 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.28□□□□□ -2.04
CDH12P55289 RNA5SP393-201ENST00000363423 117 ntBASIC2.28□□□□□ -2.04
CDH12P55289 RNA5SP456-201ENST00000364002 114 ntBASIC2.28□□□□□ -2.04
CDH12P55289 RNU1-51P-201ENST00000365345 176 ntBASIC2.28□□□□□ -2.04
CDH12P55289 RNA5SP240-201ENST00000365355 128 ntBASIC2.28□□□□□ -2.04
CDH12P55289 SUMO1P4-201ENST00000429430 302 ntBASIC2.28□□□□□ -2.04
CDH12P55289 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.28□□□□□ -2.04
CDH12P55289 AL731563.1-201ENST00000442202 214 ntBASIC2.28□□□□□ -2.04
CDH12P55289 AC025750.2-201ENST00000442609 450 ntBASIC2.28□□□□□ -2.04
CDH12P55289 UQCRBP2-201ENST00000447827 297 ntBASIC2.28□□□□□ -2.04
CDH12P55289 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.28□□□□□ -2.04
CDH12P55289 LINC01399-202ENST00000458450 244 ntBASIC2.28□□□□□ -2.04
CDH12P55289 RNU7-14P-201ENST00000459331 62 ntBASIC2.28□□□□□ -2.04
CDH12P55289 AC018868.1-201ENST00000491307 315 ntBASIC2.28□□□□□ -2.04
CDH12P55289 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.28□□□□□ -2.04
CDH12P55289 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.28□□□□□ -2.04
CDH12P55289 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.28□□□□□ -2.04
CDH12P55289 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.28□□□□□ -2.04
CDH12P55289 SNORA40.15-201ENST00000516884 107 ntBASIC2.28□□□□□ -2.04
CDH12P55289 AC022616.8-201ENST00000533569 253 ntBASIC2.28□□□□□ -2.04
CDH12P55289 AC018448.1-201ENST00000552843 316 ntBASIC2.28□□□□□ -2.04
CDH12P55289 AC233702.2-202ENST00000562547 291 ntBASIC2.28□□□□□ -2.04
CDH12P55289 AC074050.1-201ENST00000563247 211 ntBASIC2.28□□□□□ -2.04
CDH12P55289 MYL12BP1-201ENST00000569826 507 ntBASIC2.28□□□□□ -2.04
CDH12P55289 AC055872.1-201ENST00000570978 278 ntBASIC2.28□□□□□ -2.04
CDH12P55289 AL049779.4-201ENST00000604500 156 ntBASIC2.28□□□□□ -2.04
CDH12P55289 AC005000.2-201ENST00000605468 310 ntBASIC2.28□□□□□ -2.04
CDH12P55289 SNORD11B-201ENST00000607707 90 ntBASIC2.28□□□□□ -2.04
CDH12P55289 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.28□□□□□ -2.04
CDH12P55289 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.28□□□□□ -2.04
CDH12P55289 AC130454.1-201ENST00000622948 401 ntBASIC2.28□□□□□ -2.04
CDH12P55289 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.28□□□□□ -2.04
CDH12P55289 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.28□□□□□ -2.04
CDH12P55289 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.28□□□□□ -2.04
CDH12P55289 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CDH12P55289 Z82209.1-201ENST00000422141 2135 ntBASIC2.27□□□□□ -2.05
CDH12P55289 RNU6-545P-201ENST00000362681 104 ntBASIC2.27□□□□□ -2.05
CDH12P55289 RNU6-937P-201ENST00000384325 106 ntBASIC2.27□□□□□ -2.05
CDH12P55289 RNU6-463P-201ENST00000384340 107 ntBASIC2.27□□□□□ -2.05
CDH12P55289 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CDH12P55289 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.27□□□□□ -2.05
CDH12P55289 AC005002.2-201ENST00000438228 269 ntBASIC2.27□□□□□ -2.05
CDH12P55289 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.27□□□□□ -2.05
CDH12P55289 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms