Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.09□□□□□ -1.91
NEK4P51957 AC004832.5-201ENST00000608677 401 ntBASIC3.09□□□□□ -1.91
NEK4P51957 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.09□□□□□ -1.91
NEK4P51957 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.09□□□□□ -1.92
NEK4P51957 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NEK4P51957 MIR208A-201ENST00000362287 71 ntBASIC3.08□□□□□ -1.92
NEK4P51957 snoU2_19.2-201ENST00000363024 80 ntBASIC3.08□□□□□ -1.92
NEK4P51957 RNU1-23P-201ENST00000363361 144 ntBASIC3.08□□□□□ -1.92
NEK4P51957 SNORD87-201ENST00000364849 89 ntBASIC3.08□□□□□ -1.92
NEK4P51957 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
NEK4P51957 Y_RNA.401-201ENST00000383965 117 ntBASIC3.08□□□□□ -1.92
NEK4P51957 RNU2-32P-201ENST00000411193 191 ntBASIC3.08□□□□□ -1.92
NEK4P51957 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.08□□□□□ -1.92
NEK4P51957 RAB28P5-201ENST00000427490 651 ntBASIC3.08□□□□□ -1.92
NEK4P51957 AC092427.1-202ENST00000430569 476 ntBASIC3.08□□□□□ -1.92
NEK4P51957 RNU7-14P-201ENST00000459331 62 ntBASIC3.08□□□□□ -1.92
NEK4P51957 RNA5SP367-201ENST00000516557 118 ntBASIC3.08□□□□□ -1.92
NEK4P51957 RNU1-117P-201ENST00000517041 158 ntBASIC3.08□□□□□ -1.92
NEK4P51957 AC109329.2-201ENST00000519658 482 ntBASIC3.08□□□□□ -1.92
NEK4P51957 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.08□□□□□ -1.92
NEK4P51957 AC022616.8-201ENST00000533569 253 ntBASIC3.08□□□□□ -1.92
NEK4P51957 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.08□□□□□ -1.92
NEK4P51957 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.08□□□□□ -1.92
NEK4P51957 AC078899.3-201ENST00000599065 212 ntBASIC3.08□□□□□ -1.92
NEK4P51957 AC008873.1-201ENST00000625051 138 ntBASIC3.08□□□□□ -1.92
NEK4P51957 MIR1248-201ENST00000629190 106 ntBASIC3.08□□□□□ -1.92
NEK4P51957 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.07□□□□□ -1.92
NEK4P51957 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
NEK4P51957 MIR410-201ENST00000362222 80 ntBASIC3.07□□□□□ -1.92
NEK4P51957 Y_RNA.84-201ENST00000363011 104 ntBASIC3.07□□□□□ -1.92
NEK4P51957 SNORD113-8-201ENST00000363497 74 ntBASIC3.07□□□□□ -1.92
NEK4P51957 SNORA25.6-201ENST00000364121 118 ntBASIC3.07□□□□□ -1.92
NEK4P51957 RNU6-505P-201ENST00000384427 107 ntBASIC3.07□□□□□ -1.92
NEK4P51957 Y_RNA.570-201ENST00000384750 101 ntBASIC3.07□□□□□ -1.92
NEK4P51957 MIR215-201ENST00000384858 110 ntBASIC3.07□□□□□ -1.92
NEK4P51957 MIR586-201ENST00000385035 97 ntBASIC3.07□□□□□ -1.92
NEK4P51957 MIR9-1-201ENST00000385198 89 ntBASIC3.07□□□□□ -1.92
NEK4P51957 Y_RNA.581-201ENST00000391017 97 ntBASIC3.07□□□□□ -1.92
NEK4P51957 ATP5EP1-201ENST00000510257 156 ntBASIC3.07□□□□□ -1.92
NEK4P51957 AC055872.1-201ENST00000570978 278 ntBASIC3.07□□□□□ -1.92
NEK4P51957 MIR3670-2-201ENST00000582974 65 ntBASIC3.07□□□□□ -1.92
NEK4P51957 MIR3670-1-201ENST00000584160 65 ntBASIC3.07□□□□□ -1.92
NEK4P51957 MIR3670-3-201ENST00000584855 65 ntBASIC3.07□□□□□ -1.92
NEK4P51957 AC005176.2-201ENST00000596933 147 ntBASIC3.07□□□□□ -1.92
NEK4P51957 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.07□□□□□ -1.92
NEK4P51957 AL355297.2-201ENST00000604792 129 ntBASIC3.07□□□□□ -1.92
NEK4P51957 MIR3670-4-201ENST00000612260 65 ntBASIC3.07□□□□□ -1.92
NEK4P51957 U6.104-201ENST00000637979 90 ntBASIC3.07□□□□□ -1.92
NEK4P51957 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.07□□□□□ -1.92
NEK4P51957 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.07□□□□□ -1.92
NEK4P51957 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NEK4P51957 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.06□□□□□ -1.92
NEK4P51957 RNA5SP125-201ENST00000364843 120 ntBASIC3.06□□□□□ -1.92
NEK4P51957 RNU6-1180P-201ENST00000364935 107 ntBASIC3.06□□□□□ -1.92
NEK4P51957 Y_RNA.483-201ENST00000384380 101 ntBASIC3.06□□□□□ -1.92
NEK4P51957 Y_RNA.518-201ENST00000384552 113 ntBASIC3.06□□□□□ -1.92
NEK4P51957 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.06□□□□□ -1.92
NEK4P51957 AL390729.2-201ENST00000416137 156 ntBASIC3.06□□□□□ -1.92
NEK4P51957 RPL23AP83-201ENST00000434984 473 ntBASIC3.06□□□□□ -1.92
NEK4P51957 NDUFB4P10-201ENST00000452541 359 ntBASIC3.06□□□□□ -1.92
NEK4P51957 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.06□□□□□ -1.92
NEK4P51957 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
NEK4P51957 RNU6-965P-201ENST00000516721 96 ntBASIC3.06□□□□□ -1.92
NEK4P51957 RN7SKP282-201ENST00000516824 299 ntBASIC3.06□□□□□ -1.92
NEK4P51957 RNU6-56P-201ENST00000516986 93 ntBASIC3.06□□□□□ -1.92
NEK4P51957 RNU6-570P-201ENST00000517051 105 ntBASIC3.06□□□□□ -1.92
NEK4P51957 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.06□□□□□ -1.92
NEK4P51957 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NEK4P51957 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NEK4P51957 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NEK4P51957 Y_RNA.288-201ENST00000364854 92 ntBASIC3.05□□□□□ -1.92
NEK4P51957 U8.9-201ENST00000365667 134 ntBASIC3.05□□□□□ -1.92
NEK4P51957 RNU6-1264P-201ENST00000383891 107 ntBASIC3.05□□□□□ -1.92
NEK4P51957 RNU6-1310P-201ENST00000384153 107 ntBASIC3.05□□□□□ -1.92
NEK4P51957 MIR491-201ENST00000384877 84 ntBASIC3.05□□□□□ -1.92
NEK4P51957 MIR561-201ENST00000385216 97 ntBASIC3.05□□□□□ -1.92
NEK4P51957 MIR300-201ENST00000401138 83 ntBASIC3.05□□□□□ -1.92
NEK4P51957 RNU2-48P-201ENST00000410694 191 ntBASIC3.05□□□□□ -1.92
NEK4P51957 RNU6-1203P-201ENST00000410703 110 ntBASIC3.05□□□□□ -1.92
NEK4P51957 RNU2-25P-201ENST00000411041 191 ntBASIC3.05□□□□□ -1.92
NEK4P51957 AC096920.1-201ENST00000423991 241 ntBASIC3.05□□□□□ -1.92
NEK4P51957 UBBP3-201ENST00000445497 241 ntBASIC3.05□□□□□ -1.92
NEK4P51957 TRBVB-201ENST00000477100 408 ntBASIC3.05□□□□□ -1.92
NEK4P51957 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.05□□□□□ -1.92
NEK4P51957 RN7SKP132-201ENST00000516001 208 ntBASIC3.05□□□□□ -1.92
NEK4P51957 RNU6-496P-201ENST00000516145 99 ntBASIC3.05□□□□□ -1.92
NEK4P51957 AP002001.1-203ENST00000534002 267 ntBASIC3.05□□□□□ -1.92
NEK4P51957 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.05□□□□□ -1.92
NEK4P51957 MIR5092-201ENST00000583139 88 ntBASIC3.05□□□□□ -1.92
NEK4P51957 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.05□□□□□ -1.92
NEK4P51957 AC011373.1-201ENST00000607270 237 ntBASIC3.05□□□□□ -1.92
NEK4P51957 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.05□□□□□ -1.92
NEK4P51957 AL137790.1-201ENST00000634283 177 ntBASIC3.05□□□□□ -1.92
NEK4P51957 MIR3674-201ENST00000636576 68 ntBASIC3.05□□□□□ -1.92
NEK4P51957 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NEK4P51957 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.05□□□□□ -1.92
NEK4P51957 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.04□□□□□ -1.92
NEK4P51957 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NEK4P51957 RNU6-545P-201ENST00000362681 104 ntBASIC3.04□□□□□ -1.92
NEK4P51957 U3.8-201ENST00000363675 217 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms