Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.62□□□□□ -1.99
TM4SF4P48230 AL160413.1-201ENST00000622780 310 ntBASIC2.62□□□□□ -1.99
TM4SF4P48230 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.62□□□□□ -1.99
TM4SF4P48230 Y_RNA.11-201ENST00000362375 109 ntBASIC2.61□□□□□ -1.99
TM4SF4P48230 RNU6-879P-201ENST00000364328 108 ntBASIC2.61□□□□□ -1.99
TM4SF4P48230 Y_RNA.535-201ENST00000384612 99 ntBASIC2.61□□□□□ -1.99
TM4SF4P48230 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.61□□□□□ -1.99
TM4SF4P48230 AC027575.1-201ENST00000481064 460 ntBASIC2.61□□□□□ -1.99
TM4SF4P48230 AC105758.1-201ENST00000506038 399 ntBASIC2.61□□□□□ -1.99
TM4SF4P48230 RNU6-120P-201ENST00000516077 103 ntBASIC2.61□□□□□ -1.99
TM4SF4P48230 RNU1-117P-201ENST00000517041 158 ntBASIC2.61□□□□□ -1.99
TM4SF4P48230 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.61□□□□□ -1.99
TM4SF4P48230 AC078899.2-201ENST00000595282 212 ntBASIC2.61□□□□□ -1.99
TM4SF4P48230 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.61□□□□□ -1.99
TM4SF4P48230 AC069234.5-201ENST00000611056 416 ntBASIC2.61□□□□□ -1.99
TM4SF4P48230 AC010999.1-201ENST00000611856 324 ntBASIC2.61□□□□□ -1.99
TM4SF4P48230 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.61□□□□□ -1.99
TM4SF4P48230 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TM4SF4P48230 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TM4SF4P48230 ZNF355P-201ENST00000427301 3216 ntBASIC2.6□□□□□ -1.99
TM4SF4P48230 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.6□□□□□ -1.99
TM4SF4P48230 RNU6-160P-201ENST00000384591 107 ntBASIC2.6□□□□□ -1.99
TM4SF4P48230 MIR10B-201ENST00000385011 110 ntBASIC2.6□□□□□ -1.99
TM4SF4P48230 AL033519.2-201ENST00000403958 392 ntBASIC2.6□□□□□ -1.99
TM4SF4P48230 MIR1283-1-201ENST00000408494 87 ntBASIC2.6□□□□□ -1.99
TM4SF4P48230 SNORA11.4-201ENST00000408823 129 ntBASIC2.6□□□□□ -1.99
TM4SF4P48230 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.6□□□□□ -1.99
TM4SF4P48230 RPS15AP28-201ENST00000435088 386 ntBASIC2.6□□□□□ -1.99
TM4SF4P48230 AC007395.1-201ENST00000451333 677 ntBASIC2.6□□□□□ -1.99
TM4SF4P48230 ATP5EP1-201ENST00000510257 156 ntBASIC2.6□□□□□ -1.99
TM4SF4P48230 RNU6-699P-201ENST00000517081 110 ntBASIC2.6□□□□□ -1.99
TM4SF4P48230 AC022868.1-201ENST00000517767 391 ntBASIC2.6□□□□□ -1.99
TM4SF4P48230 DEFB131C-201ENST00000528817 165 ntBASIC2.6□□□□□ -1.99
TM4SF4P48230 AC093023.1-201ENST00000547375 507 ntBASIC2.6□□□□□ -1.99
TM4SF4P48230 AL138825.1-201ENST00000618587 192 ntBASIC2.6□□□□□ -1.99
TM4SF4P48230 AL078596.1-201ENST00000624856 447 ntBASIC2.6□□□□□ -1.99
TM4SF4P48230 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.6□□□□□ -1.99
TM4SF4P48230 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
TM4SF4P48230 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
TM4SF4P48230 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
TM4SF4P48230 RNU6-1305P-201ENST00000364353 104 ntBASIC2.59□□□□□ -1.99
TM4SF4P48230 MIR559-201ENST00000385188 96 ntBASIC2.59□□□□□ -1.99
TM4SF4P48230 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.59□□□□□ -1.99
TM4SF4P48230 AC123900.1-201ENST00000420390 96 ntBASIC2.59□□□□□ -1.99
TM4SF4P48230 AF228730.4-201ENST00000421457 183 ntBASIC2.59□□□□□ -1.99
TM4SF4P48230 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.59□□□□□ -1.99
TM4SF4P48230 AL445646.1-201ENST00000431784 216 ntBASIC2.59□□□□□ -1.99
TM4SF4P48230 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.59□□□□□ -1.99
TM4SF4P48230 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.59□□□□□ -1.99
TM4SF4P48230 Y_RNA.683-201ENST00000516508 93 ntBASIC2.59□□□□□ -1.99
TM4SF4P48230 AC023442.1-201ENST00000531247 422 ntBASIC2.59□□□□□ -1.99
TM4SF4P48230 RRN3P3-201ENST00000549207 578 ntBASIC2.59□□□□□ -1.99
TM4SF4P48230 MIR4446-201ENST00000578505 67 ntBASIC2.59□□□□□ -1.99
TM4SF4P48230 AL050343.2-201ENST00000607338 280 ntBASIC2.59□□□□□ -1.99
TM4SF4P48230 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.59□□□□□ -1.99
TM4SF4P48230 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.59□□□□□ -1.99
TM4SF4P48230 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.59□□□□□ -2
TM4SF4P48230 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.59□□□□□ -2
TM4SF4P48230 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
TM4SF4P48230 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.58□□□□□ -2
TM4SF4P48230 AL590004.2-201ENST00000404787 371 ntBASIC2.58□□□□□ -2
TM4SF4P48230 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.58□□□□□ -2
TM4SF4P48230 AC016925.1-201ENST00000458303 298 ntBASIC2.58□□□□□ -2
TM4SF4P48230 CYCSP23-201ENST00000519781 313 ntBASIC2.58□□□□□ -2
TM4SF4P48230 MIR6845-201ENST00000613182 61 ntBASIC2.58□□□□□ -2
TM4SF4P48230 AC010297.1-201ENST00000623948 149 ntBASIC2.58□□□□□ -2
TM4SF4P48230 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.58□□□□□ -2
TM4SF4P48230 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.57□□□□□ -2
TM4SF4P48230 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.57□□□□□ -2
TM4SF4P48230 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.57□□□□□ -2
TM4SF4P48230 Y_RNA.39-201ENST00000362620 98 ntBASIC2.57□□□□□ -2
TM4SF4P48230 RNU6-545P-201ENST00000362681 104 ntBASIC2.57□□□□□ -2
TM4SF4P48230 Y_RNA.419-201ENST00000384041 102 ntBASIC2.57□□□□□ -2
TM4SF4P48230 Y_RNA.463-201ENST00000384271 102 ntBASIC2.57□□□□□ -2
TM4SF4P48230 MIR181B1-201ENST00000385240 110 ntBASIC2.57□□□□□ -2
TM4SF4P48230 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
TM4SF4P48230 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.57□□□□□ -2
TM4SF4P48230 RNU7-169P-201ENST00000459456 61 ntBASIC2.57□□□□□ -2
TM4SF4P48230 RNA5SP200-201ENST00000516360 103 ntBASIC2.57□□□□□ -2
TM4SF4P48230 PRELID2P1-201ENST00000552837 301 ntBASIC2.57□□□□□ -2
TM4SF4P48230 MIR4529-201ENST00000578110 78 ntBASIC2.57□□□□□ -2
TM4SF4P48230 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.57□□□□□ -2
TM4SF4P48230 AC245884.12-201ENST00000615364 59 ntBASIC2.57□□□□□ -2
TM4SF4P48230 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.57□□□□□ -2
TM4SF4P48230 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.57□□□□□ -2
TM4SF4P48230 RNU6-1115P-201ENST00000362490 106 ntBASIC2.56□□□□□ -2
TM4SF4P48230 Y_RNA.197-201ENST00000364004 102 ntBASIC2.56□□□□□ -2
TM4SF4P48230 SNORA3A-201ENST00000364113 130 ntBASIC2.56□□□□□ -2
TM4SF4P48230 Y_RNA.332-201ENST00000365271 113 ntBASIC2.56□□□□□ -2
TM4SF4P48230 Y_RNA.445-201ENST00000384168 102 ntBASIC2.56□□□□□ -2
TM4SF4P48230 Y_RNA.557-201ENST00000384680 107 ntBASIC2.56□□□□□ -2
TM4SF4P48230 MIR586-201ENST00000385035 97 ntBASIC2.56□□□□□ -2
TM4SF4P48230 AC108667.1-201ENST00000428618 249 ntBASIC2.56□□□□□ -2
TM4SF4P48230 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.56□□□□□ -2
TM4SF4P48230 HMGB3P3-201ENST00000510526 400 ntBASIC2.56□□□□□ -2
TM4SF4P48230 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.56□□□□□ -2
TM4SF4P48230 AL080274.1-201ENST00000605565 220 ntBASIC2.56□□□□□ -2
TM4SF4P48230 AC022202.1-201ENST00000613515 211 ntBASIC2.56□□□□□ -2
TM4SF4P48230 AC068205.3-201ENST00000636385 468 ntBASIC2.56□□□□□ -2
TM4SF4P48230 RNU6-874P-201ENST00000362390 105 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms