Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 SNORD11B-201ENST00000607707 90 ntBASIC2.84□□□□□ -1.95
SLC6A4P31645 MIR7515-201ENST00000637837 67 ntBASIC2.84□□□□□ -1.95
SLC6A4P31645 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
SLC6A4P31645 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
SLC6A4P31645 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
SLC6A4P31645 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SLC6A4P31645 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
SLC6A4P31645 MIR215-201ENST00000384858 110 ntBASIC2.83□□□□□ -1.96
SLC6A4P31645 SNORA53-201ENST00000391141 249 ntBASIC2.83□□□□□ -1.96
SLC6A4P31645 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SLC6A4P31645 AL033519.2-201ENST00000403958 392 ntBASIC2.83□□□□□ -1.96
SLC6A4P31645 AL139095.1-201ENST00000404326 391 ntBASIC2.83□□□□□ -1.96
SLC6A4P31645 Y_RNA.602-201ENST00000410535 92 ntBASIC2.83□□□□□ -1.96
SLC6A4P31645 RNA5SP21-201ENST00000410917 96 ntBASIC2.83□□□□□ -1.96
SLC6A4P31645 RPL23AP36-201ENST00000413895 458 ntBASIC2.83□□□□□ -1.96
SLC6A4P31645 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.83□□□□□ -1.96
SLC6A4P31645 HSPE1P18-201ENST00000517602 280 ntBASIC2.83□□□□□ -1.96
SLC6A4P31645 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.83□□□□□ -1.96
SLC6A4P31645 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.83□□□□□ -1.96
SLC6A4P31645 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.83□□□□□ -1.96
SLC6A4P31645 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.83□□□□□ -1.96
SLC6A4P31645 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.83□□□□□ -1.96
SLC6A4P31645 MIR5006-201ENST00000583027 110 ntBASIC2.83□□□□□ -1.96
SLC6A4P31645 AC037487.3-201ENST00000606668 112 ntBASIC2.83□□□□□ -1.96
SLC6A4P31645 AC090425.1-201ENST00000610007 140 ntBASIC2.83□□□□□ -1.96
SLC6A4P31645 AC127459.3-201ENST00000624328 466 ntBASIC2.83□□□□□ -1.96
SLC6A4P31645 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.83□□□□□ -1.96
SLC6A4P31645 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SLC6A4P31645 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SLC6A4P31645 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SLC6A4P31645 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.82□□□□□ -1.96
SLC6A4P31645 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SLC6A4P31645 MIR410-201ENST00000362222 80 ntBASIC2.82□□□□□ -1.96
SLC6A4P31645 RNU6-961P-201ENST00000363893 105 ntBASIC2.82□□□□□ -1.96
SLC6A4P31645 SNORD32B-201ENST00000364460 84 ntBASIC2.82□□□□□ -1.96
SLC6A4P31645 Y_RNA.352-201ENST00000365439 102 ntBASIC2.82□□□□□ -1.96
SLC6A4P31645 SNORA18.2-201ENST00000383865 132 ntBASIC2.82□□□□□ -1.96
SLC6A4P31645 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SLC6A4P31645 RNU2-20P-201ENST00000410425 191 ntBASIC2.82□□□□□ -1.96
SLC6A4P31645 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.82□□□□□ -1.96
SLC6A4P31645 SNORD109B-201ENST00000458961 67 ntBASIC2.82□□□□□ -1.96
SLC6A4P31645 SNORD109A-201ENST00000459128 67 ntBASIC2.82□□□□□ -1.96
SLC6A4P31645 AC080013.2-201ENST00000460866 323 ntBASIC2.82□□□□□ -1.96
SLC6A4P31645 RNU6-1338P-201ENST00000516328 91 ntBASIC2.82□□□□□ -1.96
SLC6A4P31645 RNU7-110P-201ENST00000516891 62 ntBASIC2.82□□□□□ -1.96
SLC6A4P31645 AL357075.2-201ENST00000614906 189 ntBASIC2.82□□□□□ -1.96
SLC6A4P31645 AC090517.3-201ENST00000625170 141 ntBASIC2.82□□□□□ -1.96
SLC6A4P31645 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
SLC6A4P31645 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.82□□□□□ -1.96
SLC6A4P31645 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SLC6A4P31645 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.82□□□□□ -1.96
SLC6A4P31645 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.82□□□□□ -1.96
SLC6A4P31645 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.81□□□□□ -1.96
SLC6A4P31645 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SLC6A4P31645 RNA5SP432-201ENST00000362480 116 ntBASIC2.81□□□□□ -1.96
SLC6A4P31645 Y_RNA.237-201ENST00000364439 102 ntBASIC2.81□□□□□ -1.96
SLC6A4P31645 SNORA20.1-201ENST00000364790 130 ntBASIC2.81□□□□□ -1.96
SLC6A4P31645 SNORA72.2-201ENST00000365028 127 ntBASIC2.81□□□□□ -1.96
SLC6A4P31645 RNU6-326P-201ENST00000365480 107 ntBASIC2.81□□□□□ -1.96
SLC6A4P31645 Y_RNA.416-201ENST00000384014 113 ntBASIC2.81□□□□□ -1.96
SLC6A4P31645 AL109933.2-201ENST00000452651 260 ntBASIC2.81□□□□□ -1.96
SLC6A4P31645 AC140059.1-201ENST00000489238 361 ntBASIC2.81□□□□□ -1.96
SLC6A4P31645 RNU2-44P-201ENST00000516795 194 ntBASIC2.81□□□□□ -1.96
SLC6A4P31645 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.81□□□□□ -1.96
SLC6A4P31645 DEFB108E-201ENST00000524692 240 ntBASIC2.81□□□□□ -1.96
SLC6A4P31645 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.81□□□□□ -1.96
SLC6A4P31645 RRN3P3-201ENST00000549207 578 ntBASIC2.81□□□□□ -1.96
SLC6A4P31645 AC105245.1-201ENST00000581934 244 ntBASIC2.81□□□□□ -1.96
SLC6A4P31645 AC005357.1-201ENST00000588399 301 ntBASIC2.81□□□□□ -1.96
SLC6A4P31645 AC012433.1-201ENST00000588916 398 ntBASIC2.81□□□□□ -1.96
SLC6A4P31645 AC069294.1-201ENST00000608397 350 ntBASIC2.81□□□□□ -1.96
SLC6A4P31645 IGHVIII-44-202ENST00000636235 289 ntBASIC2.81□□□□□ -1.96
SLC6A4P31645 AC068205.3-201ENST00000636385 468 ntBASIC2.81□□□□□ -1.96
SLC6A4P31645 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SLC6A4P31645 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
SLC6A4P31645 Z82209.1-201ENST00000422141 2135 ntBASIC2.81□□□□□ -1.96
SLC6A4P31645 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
SLC6A4P31645 MIR26A1-201ENST00000362205 77 ntBASIC2.8□□□□□ -1.96
SLC6A4P31645 Y_RNA.257-201ENST00000364596 102 ntBASIC2.8□□□□□ -1.96
SLC6A4P31645 RNU6-1175P-201ENST00000365200 107 ntBASIC2.8□□□□□ -1.96
SLC6A4P31645 RNU6-1264P-201ENST00000383891 107 ntBASIC2.8□□□□□ -1.96
SLC6A4P31645 Y_RNA.541-201ENST00000384640 113 ntBASIC2.8□□□□□ -1.96
SLC6A4P31645 MIR9-1-201ENST00000385198 89 ntBASIC2.8□□□□□ -1.96
SLC6A4P31645 MIR549A-201ENST00000385268 96 ntBASIC2.8□□□□□ -1.96
SLC6A4P31645 MIR1294-201ENST00000408503 142 ntBASIC2.8□□□□□ -1.96
SLC6A4P31645 RAB28P5-201ENST00000427490 651 ntBASIC2.8□□□□□ -1.96
SLC6A4P31645 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.8□□□□□ -1.96
SLC6A4P31645 RPL30P4-201ENST00000429309 333 ntBASIC2.8□□□□□ -1.96
SLC6A4P31645 HSPE1P25-201ENST00000455484 251 ntBASIC2.8□□□□□ -1.96
SLC6A4P31645 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.8□□□□□ -1.96
SLC6A4P31645 RN7SKP282-201ENST00000516824 299 ntBASIC2.8□□□□□ -1.96
SLC6A4P31645 RNU6-586P-201ENST00000517265 104 ntBASIC2.8□□□□□ -1.96
SLC6A4P31645 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.8□□□□□ -1.96
SLC6A4P31645 MIR3128-201ENST00000581957 66 ntBASIC2.8□□□□□ -1.96
SLC6A4P31645 AC010620.2-201ENST00000600135 313 ntBASIC2.8□□□□□ -1.96
SLC6A4P31645 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.8□□□□□ -1.96
SLC6A4P31645 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.8□□□□□ -1.96
SLC6A4P31645 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.79□□□□□ -1.96
SLC6A4P31645 RNU4-82P-201ENST00000362443 140 ntBASIC2.79□□□□□ -1.96
SLC6A4P31645 Y_RNA.20-201ENST00000362479 113 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms