Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.01□□□□□ -1.77
RFX1P22670 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.01□□□□□ -1.77
RFX1P22670 RNU6-346P-201ENST00000516288 111 ntBASIC4.01□□□□□ -1.77
RFX1P22670 RNU6-948P-201ENST00000516374 107 ntBASIC4.01□□□□□ -1.77
RFX1P22670 AC022695.1-201ENST00000522089 237 ntBASIC4.01□□□□□ -1.77
RFX1P22670 MIR3199-1-201ENST00000582434 88 ntBASIC4.01□□□□□ -1.77
RFX1P22670 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.01□□□□□ -1.77
RFX1P22670 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.01□□□□□ -1.77
RFX1P22670 AC025754.2-201ENST00000606491 432 ntBASIC4.01□□□□□ -1.77
RFX1P22670 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC4.01□□□□□ -1.77
RFX1P22670 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC4.01□□□□□ -1.77
RFX1P22670 MIR7975-201ENST00000619350 68 ntBASIC4.01□□□□□ -1.77
RFX1P22670 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RFX1P22670 AP000553.6-201ENST00000641242 118 ntBASIC4.01□□□□□ -1.77
RFX1P22670 AC058791.1-201ENST00000608412 3198 ntBASIC4.01□□□□□ -1.77
RFX1P22670 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RFX1P22670 AL049781.1-201ENST00000623195 3585 ntBASIC4.01□□□□□ -1.77
RFX1P22670 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
RFX1P22670 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RFX1P22670 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4□□□□□ -1.77
RFX1P22670 AL513302.2-201ENST00000562313 1842 ntBASIC4□□□□□ -1.77
RFX1P22670 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RFX1P22670 AC080128.1-201ENST00000474389 1917 ntBASIC4□□□□□ -1.77
RFX1P22670 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RFX1P22670 MIR218-1-201ENST00000384999 110 ntBASIC4□□□□□ -1.77
RFX1P22670 SNORA48.5-201ENST00000391143 135 ntBASIC4□□□□□ -1.77
RFX1P22670 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4□□□□□ -1.77
RFX1P22670 AL161788.1-201ENST00000441805 169 ntBASIC4□□□□□ -1.77
RFX1P22670 RPL23AP7-203ENST00000449021 469 ntBASIC4□□□□□ -1.77
RFX1P22670 RPS20P10-201ENST00000451209 253 ntBASIC4□□□□□ -1.77
RFX1P22670 CENPBD1P1-201ENST00000464061 469 ntBASIC4□□□□□ -1.77
RFX1P22670 AC106707.2-201ENST00000484182 374 ntBASIC4□□□□□ -1.77
RFX1P22670 AC010598.1-201ENST00000510378 103 ntBASIC4□□□□□ -1.77
RFX1P22670 AC021269.2-201ENST00000532318 330 ntBASIC4□□□□□ -1.77
RFX1P22670 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4□□□□□ -1.77
RFX1P22670 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4□□□□□ -1.77
RFX1P22670 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4□□□□□ -1.77
RFX1P22670 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RFX1P22670 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RFX1P22670 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
RFX1P22670 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4□□□□□ -1.77
RFX1P22670 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RFX1P22670 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RFX1P22670 Y_RNA.75-201ENST00000362927 97 ntBASIC3.99□□□□□ -1.77
RFX1P22670 RNU6-271P-201ENST00000363858 105 ntBASIC3.99□□□□□ -1.77
RFX1P22670 RNA5SP240-201ENST00000365355 128 ntBASIC3.99□□□□□ -1.77
RFX1P22670 Y_RNA.412-201ENST00000384001 104 ntBASIC3.99□□□□□ -1.77
RFX1P22670 MIR626-201ENST00000385032 94 ntBASIC3.99□□□□□ -1.77
RFX1P22670 Y_RNA.580-201ENST00000391004 95 ntBASIC3.99□□□□□ -1.77
RFX1P22670 RNU6-381P-201ENST00000391259 108 ntBASIC3.99□□□□□ -1.77
RFX1P22670 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.99□□□□□ -1.77
RFX1P22670 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.99□□□□□ -1.77
RFX1P22670 RPS27AP9-201ENST00000477681 438 ntBASIC3.99□□□□□ -1.77
RFX1P22670 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.99□□□□□ -1.77
RFX1P22670 RNU2-34P-201ENST00000516534 121 ntBASIC3.99□□□□□ -1.77
RFX1P22670 AC022616.8-201ENST00000533569 253 ntBASIC3.99□□□□□ -1.77
RFX1P22670 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.99□□□□□ -1.77
RFX1P22670 MIR5187-201ENST00000583479 76 ntBASIC3.99□□□□□ -1.77
RFX1P22670 AC023043.3-201ENST00000593113 385 ntBASIC3.99□□□□□ -1.77
RFX1P22670 AL356280.1-201ENST00000603614 379 ntBASIC3.99□□□□□ -1.77
RFX1P22670 AC006435.5-201ENST00000624486 112 ntBASIC3.99□□□□□ -1.77
RFX1P22670 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RFX1P22670 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RFX1P22670 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.99□□□□□ -1.77
RFX1P22670 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RFX1P22670 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.98□□□□□ -1.77
RFX1P22670 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.98□□□□□ -1.77
RFX1P22670 Y_RNA.182-201ENST00000363880 111 ntBASIC3.98□□□□□ -1.77
RFX1P22670 Y_RNA.272-201ENST00000364696 102 ntBASIC3.98□□□□□ -1.77
RFX1P22670 RNU6-283P-201ENST00000364788 107 ntBASIC3.98□□□□□ -1.77
RFX1P22670 Y_RNA.293-201ENST00000364908 93 ntBASIC3.98□□□□□ -1.77
RFX1P22670 RNU6-546P-201ENST00000383991 107 ntBASIC3.98□□□□□ -1.77
RFX1P22670 RNU6-1235P-201ENST00000384559 107 ntBASIC3.98□□□□□ -1.77
RFX1P22670 MIR613-201ENST00000385248 95 ntBASIC3.98□□□□□ -1.77
RFX1P22670 AL355796.1-201ENST00000406706 323 ntBASIC3.98□□□□□ -1.77
RFX1P22670 NDUFB1P1-201ENST00000435191 180 ntBASIC3.98□□□□□ -1.77
RFX1P22670 TMSB4XP3-201ENST00000445144 114 ntBASIC3.98□□□□□ -1.77
RFX1P22670 RPS4XP2-201ENST00000458402 793 ntBASIC3.98□□□□□ -1.77
RFX1P22670 RNU6-498P-201ENST00000459468 107 ntBASIC3.98□□□□□ -1.77
RFX1P22670 AL133162.1-201ENST00000463228 453 ntBASIC3.98□□□□□ -1.77
RFX1P22670 AC090515.1-201ENST00000465295 476 ntBASIC3.98□□□□□ -1.77
RFX1P22670 RN7SL601P-201ENST00000471221 293 ntBASIC3.98□□□□□ -1.77
RFX1P22670 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.98□□□□□ -1.77
RFX1P22670 RNU6-579P-201ENST00000516879 102 ntBASIC3.98□□□□□ -1.77
RFX1P22670 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.98□□□□□ -1.77
RFX1P22670 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFX1P22670 AC132825.6-201ENST00000638861 357 ntBASIC3.98□□□□□ -1.77
RFX1P22670 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.98□□□□□ -1.77
RFX1P22670 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.98□□□□□ -1.77
RFX1P22670 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RFX1P22670 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.98□□□□□ -1.77
RFX1P22670 Y_RNA.23-201ENST00000362496 106 ntBASIC3.97□□□□□ -1.77
RFX1P22670 SNORA20B-201ENST00000384220 132 ntBASIC3.97□□□□□ -1.77
RFX1P22670 SNORD14D-201ENST00000384390 87 ntBASIC3.97□□□□□ -1.77
RFX1P22670 SNORA8.3-201ENST00000384679 139 ntBASIC3.97□□□□□ -1.77
RFX1P22670 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
RFX1P22670 FO393413.1-201ENST00000402892 195 ntBASIC3.97□□□□□ -1.77
RFX1P22670 BX510359.1-201ENST00000456973 237 ntBASIC3.97□□□□□ -1.77
RFX1P22670 RNU7-141P-201ENST00000459304 62 ntBASIC3.97□□□□□ -1.77
RFX1P22670 RPL36AP21-201ENST00000490372 323 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms