Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 SNORA38.1-201ENST00000364172 131 ntBASIC3.81□□□□□ -1.8
HOXD8P13378 Y_RNA.510-201ENST00000384511 114 ntBASIC3.81□□□□□ -1.8
HOXD8P13378 RNU6-768P-201ENST00000384683 107 ntBASIC3.81□□□□□ -1.8
HOXD8P13378 SNORA48.5-201ENST00000391143 135 ntBASIC3.81□□□□□ -1.8
HOXD8P13378 SNORA79-201ENST00000408376 140 ntBASIC3.81□□□□□ -1.8
HOXD8P13378 AC010099.1-201ENST00000455434 375 ntBASIC3.81□□□□□ -1.8
HOXD8P13378 RNU7-23P-201ENST00000459465 62 ntBASIC3.81□□□□□ -1.8
HOXD8P13378 RPL36AP48-201ENST00000485521 314 ntBASIC3.81□□□□□ -1.8
HOXD8P13378 AC117454.1-201ENST00000491120 168 ntBASIC3.81□□□□□ -1.8
HOXD8P13378 RNU6-561P-201ENST00000516222 102 ntBASIC3.81□□□□□ -1.8
HOXD8P13378 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXD8P13378 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXD8P13378 MIR548AY-201ENST00000617669 107 ntBASIC3.81□□□□□ -1.8
HOXD8P13378 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXD8P13378 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXD8P13378 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXD8P13378 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXD8P13378 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXD8P13378 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXD8P13378 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXD8P13378 RN7SL93P-201ENST00000463035 293 ntBASIC3.8□□□□□ -1.8
HOXD8P13378 AC092991.1-201ENST00000477176 376 ntBASIC3.8□□□□□ -1.8
HOXD8P13378 RN7SL429P-201ENST00000479090 223 ntBASIC3.8□□□□□ -1.8
HOXD8P13378 RN7SL489P-201ENST00000486185 223 ntBASIC3.8□□□□□ -1.8
HOXD8P13378 RN7SL327P-201ENST00000488659 223 ntBASIC3.8□□□□□ -1.8
HOXD8P13378 RNA5SP76-201ENST00000516277 87 ntBASIC3.8□□□□□ -1.8
HOXD8P13378 SNORA72.7-201ENST00000516349 94 ntBASIC3.8□□□□□ -1.8
HOXD8P13378 RNU5F-4P-201ENST00000516581 114 ntBASIC3.8□□□□□ -1.8
HOXD8P13378 AC090142.3-201ENST00000519012 385 ntBASIC3.8□□□□□ -1.8
HOXD8P13378 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXD8P13378 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXD8P13378 MIR5680-201ENST00000577577 84 ntBASIC3.8□□□□□ -1.8
HOXD8P13378 MIR4276-201ENST00000584832 70 ntBASIC3.8□□□□□ -1.8
HOXD8P13378 AL031274.2-201ENST00000599419 203 ntBASIC3.8□□□□□ -1.8
HOXD8P13378 U7.2-201ENST00000607576 63 ntBASIC3.8□□□□□ -1.8
HOXD8P13378 RN7SL853P-201ENST00000617250 223 ntBASIC3.8□□□□□ -1.8
HOXD8P13378 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
HOXD8P13378 AC068647.1-201ENST00000489539 2265 ntBASIC3.8□□□□□ -1.8
HOXD8P13378 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXD8P13378 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXD8P13378 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXD8P13378 Y_RNA.393-201ENST00000383936 102 ntBASIC3.79□□□□□ -1.8
HOXD8P13378 RNU6-750P-201ENST00000390946 107 ntBASIC3.79□□□□□ -1.8
HOXD8P13378 RNU6-588P-201ENST00000410281 105 ntBASIC3.79□□□□□ -1.8
HOXD8P13378 Y_RNA.622-201ENST00000411091 108 ntBASIC3.79□□□□□ -1.8
HOXD8P13378 AC010154.1-201ENST00000425857 269 ntBASIC3.79□□□□□ -1.8
HOXD8P13378 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXD8P13378 RPS4XP2-201ENST00000458402 793 ntBASIC3.79□□□□□ -1.8
HOXD8P13378 RNU7-197P-201ENST00000458836 62 ntBASIC3.79□□□□□ -1.8
HOXD8P13378 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXD8P13378 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.79□□□□□ -1.8
HOXD8P13378 RN7SKP179-201ENST00000516126 217 ntBASIC3.79□□□□□ -1.8
HOXD8P13378 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXD8P13378 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
HOXD8P13378 AL513302.2-201ENST00000562313 1842 ntBASIC3.79□□□□□ -1.8
HOXD8P13378 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HOXD8P13378 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXD8P13378 RNU1-18P-201ENST00000363062 164 ntBASIC3.78□□□□□ -1.8
HOXD8P13378 U8.7-201ENST00000364940 136 ntBASIC3.78□□□□□ -1.8
HOXD8P13378 HSPE1P26-201ENST00000405341 275 ntBASIC3.78□□□□□ -1.8
HOXD8P13378 SNORA36B-201ENST00000410438 131 ntBASIC3.78□□□□□ -1.8
HOXD8P13378 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXD8P13378 RN7SL504P-201ENST00000494496 287 ntBASIC3.78□□□□□ -1.8
HOXD8P13378 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXD8P13378 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXD8P13378 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXD8P13378 AC099778.2-201ENST00000610904 211 ntBASIC3.78□□□□□ -1.8
HOXD8P13378 AC090517.3-201ENST00000625170 141 ntBASIC3.78□□□□□ -1.8
HOXD8P13378 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXD8P13378 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXD8P13378 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXD8P13378 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
HOXD8P13378 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.78□□□□□ -1.81
HOXD8P13378 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXD8P13378 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
HOXD8P13378 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HOXD8P13378 AL035425.3-201ENST00000564206 4996 ntBASIC3.77□□□□□ -1.81
HOXD8P13378 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.77□□□□□ -1.81
HOXD8P13378 RNU6-1080P-201ENST00000383982 107 ntBASIC3.77□□□□□ -1.81
HOXD8P13378 SNORA67.2-201ENST00000384300 149 ntBASIC3.77□□□□□ -1.81
HOXD8P13378 SNORA75.5-201ENST00000391291 81 ntBASIC3.77□□□□□ -1.81
HOXD8P13378 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXD8P13378 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXD8P13378 RAC1P5-201ENST00000512182 576 ntBASIC3.77□□□□□ -1.81
HOXD8P13378 MIR4325-201ENST00000583049 90 ntBASIC3.77□□□□□ -1.81
HOXD8P13378 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXD8P13378 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
HOXD8P13378 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXD8P13378 TNPO1P3-201ENST00000436471 2662 ntBASIC3.77□□□□□ -1.81
HOXD8P13378 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXD8P13378 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.76□□□□□ -1.81
HOXD8P13378 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HOXD8P13378 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HOXD8P13378 Y_RNA.43-201ENST00000362670 111 ntBASIC3.76□□□□□ -1.81
HOXD8P13378 RNA5SP374-201ENST00000362939 125 ntBASIC3.76□□□□□ -1.81
HOXD8P13378 Y_RNA.124-201ENST00000363339 93 ntBASIC3.76□□□□□ -1.81
HOXD8P13378 RNU6-915P-201ENST00000364943 103 ntBASIC3.76□□□□□ -1.81
HOXD8P13378 MIR586-201ENST00000385035 97 ntBASIC3.76□□□□□ -1.81
HOXD8P13378 RNU4-47P-201ENST00000410876 114 ntBASIC3.76□□□□□ -1.81
HOXD8P13378 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms