Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
SYPP08247 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.33□□□□□ -1.88
SYPP08247 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.33□□□□□ -1.88
SYPP08247 Y_RNA.343-201ENST00000365354 112 ntBASIC3.33□□□□□ -1.88
SYPP08247 Y_RNA.368-201ENST00000365547 113 ntBASIC3.33□□□□□ -1.88
SYPP08247 Y_RNA.488-201ENST00000384403 102 ntBASIC3.33□□□□□ -1.88
SYPP08247 Y_RNA.497-201ENST00000384447 98 ntBASIC3.33□□□□□ -1.88
SYPP08247 RNU6-1117P-201ENST00000384525 104 ntBASIC3.33□□□□□ -1.88
SYPP08247 RNU7-170P-201ENST00000459303 61 ntBASIC3.33□□□□□ -1.88
SYPP08247 SNORA31.1-201ENST00000515993 133 ntBASIC3.33□□□□□ -1.88
SYPP08247 SNORA31.5-201ENST00000516190 133 ntBASIC3.33□□□□□ -1.88
SYPP08247 AC021269.2-201ENST00000532318 330 ntBASIC3.33□□□□□ -1.88
SYPP08247 RNVU1-4-201ENST00000612985 164 ntBASIC3.33□□□□□ -1.88
SYPP08247 AC134026.1-201ENST00000623249 2239 ntBASIC3.33□□□□□ -1.88
SYPP08247 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.33□□□□□ -1.88
SYPP08247 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SYPP08247 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SYPP08247 AL356274.2-201ENST00000624379 3752 ntBASIC3.33□□□□□ -1.88
SYPP08247 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
SYPP08247 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.33□□□□□ -1.88
SYPP08247 PWAR6-201ENST00000552334 4618 ntBASIC3.32□□□□□ -1.88
SYPP08247 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SYPP08247 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
SYPP08247 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.32□□□□□ -1.88
SYPP08247 AL035425.3-201ENST00000564206 4996 ntBASIC3.32□□□□□ -1.88
SYPP08247 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.32□□□□□ -1.88
SYPP08247 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.32□□□□□ -1.88
SYPP08247 AC091152.2-201ENST00000591628 2569 ntBASIC3.32□□□□□ -1.88
SYPP08247 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SYPP08247 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SYPP08247 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SYPP08247 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SYPP08247 RNU6-1048P-201ENST00000364054 107 ntBASIC3.32□□□□□ -1.88
SYPP08247 Y_RNA.215-201ENST00000364204 112 ntBASIC3.32□□□□□ -1.88
SYPP08247 Y_RNA.568-201ENST00000384742 113 ntBASIC3.32□□□□□ -1.88
SYPP08247 MIR548B-201ENST00000385247 97 ntBASIC3.32□□□□□ -1.88
SYPP08247 AC006989.1-201ENST00000427212 131 ntBASIC3.32□□□□□ -1.88
SYPP08247 AL162725.1-201ENST00000435405 301 ntBASIC3.32□□□□□ -1.88
SYPP08247 Y_RNA.797-201ENST00000515977 94 ntBASIC3.32□□□□□ -1.88
SYPP08247 RN7SKP164-201ENST00000516138 266 ntBASIC3.32□□□□□ -1.88
SYPP08247 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.32□□□□□ -1.88
SYPP08247 MIR4738-201ENST00000579134 87 ntBASIC3.32□□□□□ -1.88
SYPP08247 RMST_8.1-201ENST00000610287 165 ntBASIC3.32□□□□□ -1.88
SYPP08247 AC099778.2-201ENST00000610904 211 ntBASIC3.32□□□□□ -1.88
SYPP08247 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.32□□□□□ -1.88
SYPP08247 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.32□□□□□ -1.88
SYPP08247 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SYPP08247 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SYPP08247 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SYPP08247 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
SYPP08247 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SYPP08247 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SYPP08247 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
SYPP08247 RNA5SP295-201ENST00000362655 121 ntBASIC3.31□□□□□ -1.88
SYPP08247 snoU2_19.4-201ENST00000364329 80 ntBASIC3.31□□□□□ -1.88
SYPP08247 SNORD32B-201ENST00000364460 84 ntBASIC3.31□□□□□ -1.88
SYPP08247 MIR626-201ENST00000385032 94 ntBASIC3.31□□□□□ -1.88
SYPP08247 AL355497.1-201ENST00000406262 551 ntBASIC3.31□□□□□ -1.88
SYPP08247 RNU6-1077P-201ENST00000410506 102 ntBASIC3.31□□□□□ -1.88
SYPP08247 EBAG9P1-201ENST00000418955 543 ntBASIC3.31□□□□□ -1.88
SYPP08247 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.31□□□□□ -1.88
SYPP08247 SNORD116-25-201ENST00000516517 92 ntBASIC3.31□□□□□ -1.88
SYPP08247 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.31□□□□□ -1.88
SYPP08247 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.31□□□□□ -1.88
SYPP08247 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.31□□□□□ -1.88
SYPP08247 RPL17P51-201ENST00000605218 238 ntBASIC3.31□□□□□ -1.88
SYPP08247 AC069294.1-201ENST00000608397 350 ntBASIC3.31□□□□□ -1.88
SYPP08247 GABRG2-229ENST00000641017 3628 ntBASIC3.31□□□□□ -1.88
SYPP08247 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SYPP08247 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SYPP08247 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
SYPP08247 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SYPP08247 RNU6-103P-201ENST00000363686 107 ntBASIC3.3□□□□□ -1.88
SYPP08247 RNU6-899P-201ENST00000363947 107 ntBASIC3.3□□□□□ -1.88
SYPP08247 RNU4-10P-201ENST00000364383 140 ntBASIC3.3□□□□□ -1.88
SYPP08247 RNU6-818P-201ENST00000364837 108 ntBASIC3.3□□□□□ -1.88
SYPP08247 Y_RNA.310-201ENST00000365063 113 ntBASIC3.3□□□□□ -1.88
SYPP08247 Y_RNA.456-201ENST00000384232 111 ntBASIC3.3□□□□□ -1.88
SYPP08247 RNU6-959P-201ENST00000384671 107 ntBASIC3.3□□□□□ -1.88
SYPP08247 SNORA8.3-201ENST00000384679 139 ntBASIC3.3□□□□□ -1.88
SYPP08247 RNU6-578P-201ENST00000390980 103 ntBASIC3.3□□□□□ -1.88
SYPP08247 RNU6-239P-201ENST00000390990 99 ntBASIC3.3□□□□□ -1.88
SYPP08247 RNU6-855P-201ENST00000410395 104 ntBASIC3.3□□□□□ -1.88
SYPP08247 AL031183.1-201ENST00000457667 207 ntBASIC3.3□□□□□ -1.88
SYPP08247 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.3□□□□□ -1.88
SYPP08247 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.3□□□□□ -1.88
SYPP08247 RNU7-121P-201ENST00000516604 62 ntBASIC3.3□□□□□ -1.88
SYPP08247 MIR4744-201ENST00000581563 82 ntBASIC3.3□□□□□ -1.88
SYPP08247 MIR7106-201ENST00000612419 65 ntBASIC3.3□□□□□ -1.88
SYPP08247 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.3□□□□□ -1.88
SYPP08247 Y_RNA.778-201ENST00000620203 90 ntBASIC3.3□□□□□ -1.88
SYPP08247 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SYPP08247 AP003122.5-201ENST00000527668 3766 ntBASIC3.3□□□□□ -1.88
SYPP08247 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SYPP08247 SNORA80A-201ENST00000363922 136 ntBASIC3.29□□□□□ -1.88
SYPP08247 Y_RNA.341-201ENST00000365341 102 ntBASIC3.29□□□□□ -1.88
SYPP08247 MIR586-201ENST00000385035 97 ntBASIC3.29□□□□□ -1.88
SYPP08247 AC097463.2-201ENST00000421074 142 ntBASIC3.29□□□□□ -1.88
SYPP08247 EIF4EP4-201ENST00000424916 578 ntBASIC3.29□□□□□ -1.88
SYPP08247 CR769767.1-201ENST00000436337 346 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms