Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.74□□□□□ -1.97
TOP3BO95985 SNORA9.3-201ENST00000516383 129 ntBASIC2.74□□□□□ -1.97
TOP3BO95985 RNU6-548P-201ENST00000517083 115 ntBASIC2.74□□□□□ -1.97
TOP3BO95985 MIR4643-201ENST00000577473 78 ntBASIC2.74□□□□□ -1.97
TOP3BO95985 MIR3605-201ENST00000583214 100 ntBASIC2.74□□□□□ -1.97
TOP3BO95985 RBBP8P1-201ENST00000449447 1844 ntBASIC2.74□□□□□ -1.97
TOP3BO95985 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
TOP3BO95985 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TOP3BO95985 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
TOP3BO95985 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.73□□□□□ -1.97
TOP3BO95985 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.73□□□□□ -1.97
TOP3BO95985 RNA5SP289-201ENST00000362332 137 ntBASIC2.73□□□□□ -1.97
TOP3BO95985 RNU4-90P-201ENST00000362773 141 ntBASIC2.73□□□□□ -1.97
TOP3BO95985 Y_RNA.270-201ENST00000364693 104 ntBASIC2.73□□□□□ -1.97
TOP3BO95985 RNU6-142P-201ENST00000384019 107 ntBASIC2.73□□□□□ -1.97
TOP3BO95985 MIR544A-201ENST00000384855 91 ntBASIC2.73□□□□□ -1.97
TOP3BO95985 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
TOP3BO95985 MIR1298-201ENST00000408783 112 ntBASIC2.73□□□□□ -1.97
TOP3BO95985 RNA5SP390-201ENST00000410191 113 ntBASIC2.73□□□□□ -1.97
TOP3BO95985 RPL19P1-201ENST00000411635 428 ntBASIC2.73□□□□□ -1.97
TOP3BO95985 AC005002.2-201ENST00000438228 269 ntBASIC2.73□□□□□ -1.97
TOP3BO95985 AC096638.1-201ENST00000444678 216 ntBASIC2.73□□□□□ -1.97
TOP3BO95985 UBBP3-201ENST00000445497 241 ntBASIC2.73□□□□□ -1.97
TOP3BO95985 Z96811.1-201ENST00000445880 108 ntBASIC2.73□□□□□ -1.97
TOP3BO95985 AL138752.1-201ENST00000452964 351 ntBASIC2.73□□□□□ -1.97
TOP3BO95985 AC016256.1-201ENST00000547971 354 ntBASIC2.73□□□□□ -1.97
TOP3BO95985 AC027288.2-201ENST00000553028 243 ntBASIC2.73□□□□□ -1.97
TOP3BO95985 AL137100.2-201ENST00000555786 315 ntBASIC2.73□□□□□ -1.97
TOP3BO95985 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.73□□□□□ -1.97
TOP3BO95985 AL391813.1-201ENST00000603098 260 ntBASIC2.73□□□□□ -1.97
TOP3BO95985 AL356157.2-201ENST00000605122 111 ntBASIC2.73□□□□□ -1.97
TOP3BO95985 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.73□□□□□ -1.97
TOP3BO95985 AC127459.3-201ENST00000624328 466 ntBASIC2.73□□□□□ -1.97
TOP3BO95985 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TOP3BO95985 Y_RNA.319-201ENST00000365138 92 ntBASIC2.72□□□□□ -1.97
TOP3BO95985 U8.10-201ENST00000384260 133 ntBASIC2.72□□□□□ -1.97
TOP3BO95985 MIR10B-201ENST00000385011 110 ntBASIC2.72□□□□□ -1.97
TOP3BO95985 AL512633.1-201ENST00000399931 655 ntBASIC2.72□□□□□ -1.97
TOP3BO95985 SNORD12B-201ENST00000410433 91 ntBASIC2.72□□□□□ -1.97
TOP3BO95985 RNA5SP492-201ENST00000411330 114 ntBASIC2.72□□□□□ -1.97
TOP3BO95985 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.72□□□□□ -1.97
TOP3BO95985 AC009414.1-201ENST00000427200 443 ntBASIC2.72□□□□□ -1.97
TOP3BO95985 AL445305.1-201ENST00000432577 575 ntBASIC2.72□□□□□ -1.97
TOP3BO95985 AC112220.1-201ENST00000434628 355 ntBASIC2.72□□□□□ -1.97
TOP3BO95985 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.72□□□□□ -1.97
TOP3BO95985 SNRPGP7-201ENST00000469016 106 ntBASIC2.72□□□□□ -1.97
TOP3BO95985 AC090525.1-201ENST00000479116 478 ntBASIC2.72□□□□□ -1.97
TOP3BO95985 AP001025.1-201ENST00000486139 332 ntBASIC2.72□□□□□ -1.97
TOP3BO95985 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.72□□□□□ -1.97
TOP3BO95985 MIR5571-201ENST00000577998 113 ntBASIC2.72□□□□□ -1.97
TOP3BO95985 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.72□□□□□ -1.97
TOP3BO95985 AC008739.2-201ENST00000597006 317 ntBASIC2.72□□□□□ -1.97
TOP3BO95985 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.72□□□□□ -1.97
TOP3BO95985 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.71□□□□□ -1.97
TOP3BO95985 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
TOP3BO95985 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.71□□□□□ -1.98
TOP3BO95985 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
TOP3BO95985 Y_RNA.83-201ENST00000363005 113 ntBASIC2.71□□□□□ -1.98
TOP3BO95985 RNU6-487P-201ENST00000365430 104 ntBASIC2.71□□□□□ -1.98
TOP3BO95985 RNU6-886P-201ENST00000384319 105 ntBASIC2.71□□□□□ -1.98
TOP3BO95985 Y_RNA.504-201ENST00000384481 104 ntBASIC2.71□□□□□ -1.98
TOP3BO95985 RNU6-541P-201ENST00000384709 110 ntBASIC2.71□□□□□ -1.98
TOP3BO95985 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
TOP3BO95985 AL138827.1-201ENST00000402666 306 ntBASIC2.71□□□□□ -1.98
TOP3BO95985 AL133475.1-201ENST00000404414 305 ntBASIC2.71□□□□□ -1.98
TOP3BO95985 AC104332.1-201ENST00000440471 797 ntBASIC2.71□□□□□ -1.98
TOP3BO95985 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.71□□□□□ -1.98
TOP3BO95985 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.71□□□□□ -1.98
TOP3BO95985 RN7SKP49-201ENST00000516675 260 ntBASIC2.71□□□□□ -1.98
TOP3BO95985 CKS1BP7-201ENST00000522230 235 ntBASIC2.71□□□□□ -1.98
TOP3BO95985 UBL5P4-201ENST00000562584 236 ntBASIC2.71□□□□□ -1.98
TOP3BO95985 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.71□□□□□ -1.98
TOP3BO95985 MIR5695-201ENST00000579717 85 ntBASIC2.71□□□□□ -1.98
TOP3BO95985 RNU6-91P-201ENST00000607774 107 ntBASIC2.71□□□□□ -1.98
TOP3BO95985 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.71□□□□□ -1.98
TOP3BO95985 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.71□□□□□ -1.98
TOP3BO95985 AC005296.1-201ENST00000616145 209 ntBASIC2.71□□□□□ -1.98
TOP3BO95985 UCA1.1-201ENST00000620952 75 ntBASIC2.71□□□□□ -1.98
TOP3BO95985 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
TOP3BO95985 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
TOP3BO95985 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
TOP3BO95985 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.7□□□□□ -1.98
TOP3BO95985 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
TOP3BO95985 Y_RNA.164-201ENST00000363709 102 ntBASIC2.7□□□□□ -1.98
TOP3BO95985 Y_RNA.286-201ENST00000364813 102 ntBASIC2.7□□□□□ -1.98
TOP3BO95985 RNU6-622P-201ENST00000384272 103 ntBASIC2.7□□□□□ -1.98
TOP3BO95985 MIR487A-201ENST00000385009 80 ntBASIC2.7□□□□□ -1.98
TOP3BO95985 AL033519.2-201ENST00000403958 392 ntBASIC2.7□□□□□ -1.98
TOP3BO95985 RNU4-30P-201ENST00000410245 143 ntBASIC2.7□□□□□ -1.98
TOP3BO95985 Y_RNA.793-201ENST00000411222 111 ntBASIC2.7□□□□□ -1.98
TOP3BO95985 RNU6-1001P-201ENST00000411265 100 ntBASIC2.7□□□□□ -1.98
TOP3BO95985 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.7□□□□□ -1.98
TOP3BO95985 AL358075.3-201ENST00000426289 226 ntBASIC2.7□□□□□ -1.98
TOP3BO95985 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.7□□□□□ -1.98
TOP3BO95985 GPM6BP3-201ENST00000442797 145 ntBASIC2.7□□□□□ -1.98
TOP3BO95985 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.7□□□□□ -1.98
TOP3BO95985 Y_RNA.644-201ENST00000459006 113 ntBASIC2.7□□□□□ -1.98
TOP3BO95985 RPL30P12-201ENST00000474666 353 ntBASIC2.7□□□□□ -1.98
TOP3BO95985 RPL26P26-201ENST00000480251 434 ntBASIC2.7□□□□□ -1.98
TOP3BO95985 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms