Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 MIR4506-201ENST00000584693 77 ntBASIC3.41□□□□□ -1.86
RAPGEF3O95398 U2.15-201ENST00000611544 191 ntBASIC3.41□□□□□ -1.86
RAPGEF3O95398 U2.16-201ENST00000613119 191 ntBASIC3.41□□□□□ -1.86
RAPGEF3O95398 PCGEM1.1-201ENST00000613431 131 ntBASIC3.41□□□□□ -1.86
RAPGEF3O95398 U2.12-201ENST00000613778 191 ntBASIC3.41□□□□□ -1.86
RAPGEF3O95398 U2.20-201ENST00000613956 192 ntBASIC3.41□□□□□ -1.86
RAPGEF3O95398 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.41□□□□□ -1.86
RAPGEF3O95398 U2.9-201ENST00000615427 191 ntBASIC3.41□□□□□ -1.86
RAPGEF3O95398 U2.11-201ENST00000616345 191 ntBASIC3.41□□□□□ -1.86
RAPGEF3O95398 U2.2-201ENST00000616535 191 ntBASIC3.41□□□□□ -1.86
RAPGEF3O95398 AC010205.1-201ENST00000616668 449 ntBASIC3.41□□□□□ -1.86
RAPGEF3O95398 U2.3-201ENST00000617785 191 ntBASIC3.41□□□□□ -1.86
RAPGEF3O95398 U2.19-201ENST00000618602 191 ntBASIC3.41□□□□□ -1.86
RAPGEF3O95398 RNU2-1-201ENST00000618664 191 ntBASIC3.41□□□□□ -1.86
RAPGEF3O95398 U2.6-201ENST00000619225 191 ntBASIC3.41□□□□□ -1.86
RAPGEF3O95398 U2.5-201ENST00000619465 191 ntBASIC3.41□□□□□ -1.86
RAPGEF3O95398 U2.10-201ENST00000620268 191 ntBASIC3.41□□□□□ -1.86
RAPGEF3O95398 7SK.10-201ENST00000621414 298 ntBASIC3.41□□□□□ -1.86
RAPGEF3O95398 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RAPGEF3O95398 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
RAPGEF3O95398 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.41□□□□□ -1.86
RAPGEF3O95398 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RAPGEF3O95398 RNU4-15P-201ENST00000362613 141 ntBASIC3.4□□□□□ -1.87
RAPGEF3O95398 Y_RNA.47-201ENST00000362697 108 ntBASIC3.4□□□□□ -1.87
RAPGEF3O95398 Y_RNA.210-201ENST00000364161 110 ntBASIC3.4□□□□□ -1.87
RAPGEF3O95398 RNU6-245P-201ENST00000384020 107 ntBASIC3.4□□□□□ -1.87
RAPGEF3O95398 RNU6-281P-201ENST00000384212 103 ntBASIC3.4□□□□□ -1.87
RAPGEF3O95398 RNU6-611P-201ENST00000384276 104 ntBASIC3.4□□□□□ -1.87
RAPGEF3O95398 Y_RNA.471-201ENST00000384312 102 ntBASIC3.4□□□□□ -1.87
RAPGEF3O95398 Y_RNA.574-201ENST00000384766 95 ntBASIC3.4□□□□□ -1.87
RAPGEF3O95398 MIR489-201ENST00000384923 84 ntBASIC3.4□□□□□ -1.87
RAPGEF3O95398 AL590004.2-201ENST00000404787 371 ntBASIC3.4□□□□□ -1.87
RAPGEF3O95398 RNU6-1143P-201ENST00000516125 104 ntBASIC3.4□□□□□ -1.87
RAPGEF3O95398 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.4□□□□□ -1.87
RAPGEF3O95398 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RAPGEF3O95398 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
RAPGEF3O95398 U3.9-201ENST00000363823 204 ntBASIC3.39□□□□□ -1.87
RAPGEF3O95398 RNU6-879P-201ENST00000364328 108 ntBASIC3.39□□□□□ -1.87
RAPGEF3O95398 RNU6-708P-201ENST00000384217 107 ntBASIC3.39□□□□□ -1.87
RAPGEF3O95398 SNORD78.2-201ENST00000391076 69 ntBASIC3.39□□□□□ -1.87
RAPGEF3O95398 SNORA11.4-201ENST00000408823 129 ntBASIC3.39□□□□□ -1.87
RAPGEF3O95398 WARS2P1-201ENST00000429678 537 ntBASIC3.39□□□□□ -1.87
RAPGEF3O95398 RN7SKP49-201ENST00000516675 260 ntBASIC3.39□□□□□ -1.87
RAPGEF3O95398 EIF4A1P12-201ENST00000551910 141 ntBASIC3.39□□□□□ -1.87
RAPGEF3O95398 SNRPGP20-201ENST00000604477 205 ntBASIC3.39□□□□□ -1.87
RAPGEF3O95398 AL670379.2-201ENST00000604983 252 ntBASIC3.39□□□□□ -1.87
RAPGEF3O95398 snoU13.31-201ENST00000607291 104 ntBASIC3.39□□□□□ -1.87
RAPGEF3O95398 U6.92-201ENST00000636464 89 ntBASIC3.39□□□□□ -1.87
RAPGEF3O95398 MIR7515-201ENST00000637837 67 ntBASIC3.39□□□□□ -1.87
RAPGEF3O95398 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RAPGEF3O95398 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RAPGEF3O95398 MIR29B2-201ENST00000385055 81 ntBASIC3.38□□□□□ -1.87
RAPGEF3O95398 U6atac.2-201ENST00000408644 118 ntBASIC3.38□□□□□ -1.87
RAPGEF3O95398 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
RAPGEF3O95398 RPEP5-201ENST00000441137 268 ntBASIC3.38□□□□□ -1.87
RAPGEF3O95398 AC067942.3-201ENST00000512025 362 ntBASIC3.38□□□□□ -1.87
RAPGEF3O95398 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.38□□□□□ -1.87
RAPGEF3O95398 SNORA25.11-201ENST00000515935 105 ntBASIC3.38□□□□□ -1.87
RAPGEF3O95398 RNU6-1012P-201ENST00000516606 109 ntBASIC3.38□□□□□ -1.87
RAPGEF3O95398 CYCSP23-201ENST00000519781 313 ntBASIC3.38□□□□□ -1.87
RAPGEF3O95398 AC026470.2-201ENST00000561492 181 ntBASIC3.38□□□□□ -1.87
RAPGEF3O95398 MIR5695-201ENST00000579717 85 ntBASIC3.38□□□□□ -1.87
RAPGEF3O95398 RPL30P11-203ENST00000598995 310 ntBASIC3.38□□□□□ -1.87
RAPGEF3O95398 AL161431.1-201ENST00000618966 4205 ntBASIC3.38□□□□□ -1.87
RAPGEF3O95398 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RAPGEF3O95398 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.37□□□□□ -1.87
RAPGEF3O95398 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
RAPGEF3O95398 Y_RNA.183-201ENST00000363882 113 ntBASIC3.37□□□□□ -1.87
RAPGEF3O95398 Y_RNA.458-201ENST00000384240 102 ntBASIC3.37□□□□□ -1.87
RAPGEF3O95398 RNU6-318P-201ENST00000384283 103 ntBASIC3.37□□□□□ -1.87
RAPGEF3O95398 RNU6-378P-201ENST00000384324 107 ntBASIC3.37□□□□□ -1.87
RAPGEF3O95398 MIR487A-201ENST00000385009 80 ntBASIC3.37□□□□□ -1.87
RAPGEF3O95398 RPL21P1-201ENST00000399532 476 ntBASIC3.37□□□□□ -1.87
RAPGEF3O95398 RN7SKP123-201ENST00000410732 291 ntBASIC3.37□□□□□ -1.87
RAPGEF3O95398 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.37□□□□□ -1.87
RAPGEF3O95398 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.37□□□□□ -1.87
RAPGEF3O95398 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.37□□□□□ -1.87
RAPGEF3O95398 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.37□□□□□ -1.87
RAPGEF3O95398 RPL21P2-201ENST00000440049 481 ntBASIC3.37□□□□□ -1.87
RAPGEF3O95398 AC145146.1-201ENST00000496370 254 ntBASIC3.37□□□□□ -1.87
RAPGEF3O95398 AC010469.2-201ENST00000496412 480 ntBASIC3.37□□□□□ -1.87
RAPGEF3O95398 SNORA40.15-201ENST00000516884 107 ntBASIC3.37□□□□□ -1.87
RAPGEF3O95398 SCARNA3-201ENST00000517097 143 ntBASIC3.37□□□□□ -1.87
RAPGEF3O95398 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.37□□□□□ -1.87
RAPGEF3O95398 COX6CP5-201ENST00000527162 228 ntBASIC3.37□□□□□ -1.87
RAPGEF3O95398 AC093023.1-201ENST00000547375 507 ntBASIC3.37□□□□□ -1.87
RAPGEF3O95398 UBL5P4-201ENST00000562584 236 ntBASIC3.37□□□□□ -1.87
RAPGEF3O95398 AC090517.1-201ENST00000569307 266 ntBASIC3.37□□□□□ -1.87
RAPGEF3O95398 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.37□□□□□ -1.87
RAPGEF3O95398 AC125232.2-201ENST00000592457 143 ntBASIC3.37□□□□□ -1.87
RAPGEF3O95398 RAC1P9-201ENST00000604990 392 ntBASIC3.37□□□□□ -1.87
RAPGEF3O95398 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.37□□□□□ -1.87
RAPGEF3O95398 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
RAPGEF3O95398 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RAPGEF3O95398 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
RAPGEF3O95398 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RAPGEF3O95398 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RAPGEF3O95398 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.36□□□□□ -1.87
RAPGEF3O95398 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.36□□□□□ -1.87
RAPGEF3O95398 SET-203ENST00000372688 801 ntTSL 2 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms