Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC074290.1-201ENST00000448883 135 ntBASIC2.18□□□□□ -2.06
RTN3O95197 AC067942.3-201ENST00000512025 362 ntBASIC2.18□□□□□ -2.06
RTN3O95197 RNU6-307P-201ENST00000516743 106 ntBASIC2.18□□□□□ -2.06
RTN3O95197 MIR3935-201ENST00000583472 104 ntBASIC2.18□□□□□ -2.06
RTN3O95197 AC005899.2-201ENST00000584353 90 ntBASIC2.18□□□□□ -2.06
RTN3O95197 AC005034.5-201ENST00000604219 466 ntBASIC2.18□□□□□ -2.06
RTN3O95197 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.18□□□□□ -2.06
RTN3O95197 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
RTN3O95197 RNU6-159P-201ENST00000391080 106 ntBASIC2.17□□□□□ -2.06
RTN3O95197 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.17□□□□□ -2.06
RTN3O95197 RNA5SP501-201ENST00000410990 112 ntBASIC2.17□□□□□ -2.06
RTN3O95197 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.17□□□□□ -2.06
RTN3O95197 RNA5SP233-201ENST00000459153 113 ntBASIC2.17□□□□□ -2.06
RTN3O95197 MTND4P17-201ENST00000470444 350 ntBASIC2.17□□□□□ -2.06
RTN3O95197 HMGN2P9-201ENST00000476875 229 ntBASIC2.17□□□□□ -2.06
RTN3O95197 RPL7P42-201ENST00000481005 679 ntBASIC2.17□□□□□ -2.06
RTN3O95197 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.17□□□□□ -2.06
RTN3O95197 SNORA25.14-201ENST00000516481 132 ntBASIC2.17□□□□□ -2.06
RTN3O95197 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.17□□□□□ -2.06
RTN3O95197 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.17□□□□□ -2.06
RTN3O95197 MIR5701-3-201ENST00000578890 82 ntBASIC2.17□□□□□ -2.06
RTN3O95197 MIR5701-1-201ENST00000585138 82 ntBASIC2.17□□□□□ -2.06
RTN3O95197 SNORD11B-201ENST00000607707 90 ntBASIC2.17□□□□□ -2.06
RTN3O95197 AC005014.2-201ENST00000607795 599 ntBASIC2.17□□□□□ -2.06
RTN3O95197 MIR5701-2-201ENST00000615634 82 ntBASIC2.17□□□□□ -2.06
RTN3O95197 RNU1-62P-201ENST00000362599 164 ntBASIC2.16□□□□□ -2.06
RTN3O95197 RNU6-873P-201ENST00000363833 107 ntBASIC2.16□□□□□ -2.06
RTN3O95197 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.16□□□□□ -2.06
RTN3O95197 SNORA48.1-201ENST00000390879 135 ntBASIC2.16□□□□□ -2.06
RTN3O95197 RNU6-700P-201ENST00000391043 107 ntBASIC2.16□□□□□ -2.06
RTN3O95197 SNORA75.4-201ENST00000391278 119 ntBASIC2.16□□□□□ -2.06
RTN3O95197 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.16□□□□□ -2.06
RTN3O95197 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.16□□□□□ -2.06
RTN3O95197 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.16□□□□□ -2.06
RTN3O95197 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.16□□□□□ -2.06
RTN3O95197 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.16□□□□□ -2.06
RTN3O95197 RNU6-948P-201ENST00000516374 107 ntBASIC2.16□□□□□ -2.06
RTN3O95197 SUMO2P18-201ENST00000518873 252 ntBASIC2.16□□□□□ -2.06
RTN3O95197 AC005730.3-201ENST00000583067 366 ntBASIC2.16□□□□□ -2.06
RTN3O95197 AL109918.3-201ENST00000603072 338 ntBASIC2.16□□□□□ -2.06
RTN3O95197 AL355802.3-201ENST00000607571 545 ntBASIC2.16□□□□□ -2.06
RTN3O95197 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.16□□□□□ -2.06
RTN3O95197 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.16□□□□□ -2.06
RTN3O95197 AC008873.1-201ENST00000625051 138 ntBASIC2.16□□□□□ -2.06
RTN3O95197 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.16□□□□□ -2.06
RTN3O95197 ZNF72P-201ENST00000425869 1908 ntBASIC2.16□□□□□ -2.06
RTN3O95197 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RTN3O95197 AL159152.1-201ENST00000635019 2587 ntBASIC2.15□□□□□ -2.06
RTN3O95197 RNY1P16-201ENST00000363063 111 ntBASIC2.15□□□□□ -2.07
RTN3O95197 SNORA72.1-201ENST00000363485 129 ntBASIC2.15□□□□□ -2.07
RTN3O95197 RNU6-1305P-201ENST00000364353 104 ntBASIC2.15□□□□□ -2.07
RTN3O95197 Y_RNA.404-201ENST00000383978 102 ntBASIC2.15□□□□□ -2.07
RTN3O95197 RNU6-418P-201ENST00000384035 107 ntBASIC2.15□□□□□ -2.07
RTN3O95197 RNU6-975P-201ENST00000384296 105 ntBASIC2.15□□□□□ -2.07
RTN3O95197 SNORA8-201ENST00000384574 139 ntBASIC2.15□□□□□ -2.07
RTN3O95197 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.15□□□□□ -2.07
RTN3O95197 MTND3P23-201ENST00000431980 347 ntBASIC2.15□□□□□ -2.07
RTN3O95197 AP000870.1-201ENST00000472927 406 ntBASIC2.15□□□□□ -2.07
RTN3O95197 RNA5SP384-201ENST00000516615 116 ntBASIC2.15□□□□□ -2.07
RTN3O95197 RNU6-856P-201ENST00000516959 98 ntBASIC2.15□□□□□ -2.07
RTN3O95197 AC105029.1-201ENST00000520250 669 ntBASIC2.15□□□□□ -2.07
RTN3O95197 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.15□□□□□ -2.07
RTN3O95197 AL121579.1-201ENST00000555129 305 ntBASIC2.15□□□□□ -2.07
RTN3O95197 UBE2V2P2-201ENST00000587677 504 ntBASIC2.15□□□□□ -2.07
RTN3O95197 AC008749.1-201ENST00000597650 306 ntBASIC2.15□□□□□ -2.07
RTN3O95197 AC016727.1-205ENST00000605437 569 ntBASIC2.15□□□□□ -2.07
RTN3O95197 AL773524.1-201ENST00000614065 229 ntBASIC2.15□□□□□ -2.07
RTN3O95197 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
RTN3O95197 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.15□□□□□ -2.07
RTN3O95197 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RTN3O95197 SNORA67.2-201ENST00000384300 149 ntBASIC2.14□□□□□ -2.07
RTN3O95197 RNU6-1235P-201ENST00000384559 107 ntBASIC2.14□□□□□ -2.07
RTN3O95197 RNA5SP212-201ENST00000391223 107 ntBASIC2.14□□□□□ -2.07
RTN3O95197 RNU4-14P-201ENST00000410858 122 ntBASIC2.14□□□□□ -2.07
RTN3O95197 AC244636.1-201ENST00000421152 228 ntBASIC2.14□□□□□ -2.07
RTN3O95197 MTCYBP10-201ENST00000424905 650 ntBASIC2.14□□□□□ -2.07
RTN3O95197 USP9YP16-201ENST00000430287 407 ntBASIC2.14□□□□□ -2.07
RTN3O95197 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.14□□□□□ -2.07
RTN3O95197 RPL23AP6-201ENST00000446637 472 ntBASIC2.14□□□□□ -2.07
RTN3O95197 USP9YP23-201ENST00000455085 407 ntBASIC2.14□□□□□ -2.07
RTN3O95197 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.14□□□□□ -2.07
RTN3O95197 RNU6-498P-201ENST00000459468 107 ntBASIC2.14□□□□□ -2.07
RTN3O95197 RNU6-1114P-201ENST00000516022 107 ntBASIC2.14□□□□□ -2.07
RTN3O95197 RNU1-117P-201ENST00000517041 158 ntBASIC2.14□□□□□ -2.07
RTN3O95197 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.14□□□□□ -2.07
RTN3O95197 UBL5P4-201ENST00000562584 236 ntBASIC2.14□□□□□ -2.07
RTN3O95197 MIR4299-201ENST00000577899 72 ntBASIC2.14□□□□□ -2.07
RTN3O95197 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.14□□□□□ -2.07
RTN3O95197 MIR5002-201ENST00000584713 97 ntBASIC2.14□□□□□ -2.07
RTN3O95197 AC083806.3-201ENST00000614016 455 ntBASIC2.14□□□□□ -2.07
RTN3O95197 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.14□□□□□ -2.07
RTN3O95197 AL078596.1-201ENST00000624856 447 ntBASIC2.14□□□□□ -2.07
RTN3O95197 AL669831.3-213ENST00000636676 183 ntBASIC2.14□□□□□ -2.07
RTN3O95197 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
RTN3O95197 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
RTN3O95197 Y_RNA.142-201ENST00000363491 102 ntBASIC2.13□□□□□ -2.07
RTN3O95197 MIR10B-201ENST00000385011 110 ntBASIC2.13□□□□□ -2.07
RTN3O95197 RNU1-139P-201ENST00000391307 165 ntBASIC2.13□□□□□ -2.07
RTN3O95197 RNU6-370P-201ENST00000411008 104 ntBASIC2.13□□□□□ -2.07
RTN3O95197 AL445305.1-201ENST00000432577 575 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms