Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RNU6-950P-201ENST00000384651 107 ntBASIC0.81□□□□□ -2.28
UPK1BO75841 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
UPK1BO75841 SNORA12.1-201ENST00000390873 148 ntBASIC0.81□□□□□ -2.28
UPK1BO75841 RNU6-440P-201ENST00000390882 105 ntBASIC0.81□□□□□ -2.28
UPK1BO75841 RN7SKP200-201ENST00000410564 320 ntBASIC0.81□□□□□ -2.28
UPK1BO75841 OOSP1P1-201ENST00000423265 274 ntBASIC0.81□□□□□ -2.28
UPK1BO75841 MTCO2P16-201ENST00000436962 677 ntBASIC0.81□□□□□ -2.28
UPK1BO75841 RNU6-221P-201ENST00000459541 99 ntBASIC0.81□□□□□ -2.28
UPK1BO75841 RPS23P4-201ENST00000487908 423 ntBASIC0.81□□□□□ -2.28
UPK1BO75841 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.81□□□□□ -2.28
UPK1BO75841 RNU6-922P-201ENST00000516753 99 ntBASIC0.81□□□□□ -2.28
UPK1BO75841 SNORA70.22-201ENST00000517160 124 ntBASIC0.81□□□□□ -2.28
UPK1BO75841 DNAJC19P9-201ENST00000555084 351 ntBASIC0.81□□□□□ -2.28
UPK1BO75841 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.81□□□□□ -2.28
UPK1BO75841 AC008088.1-201ENST00000580993 280 ntBASIC0.81□□□□□ -2.28
UPK1BO75841 MIR8076-201ENST00000611401 83 ntBASIC0.81□□□□□ -2.28
UPK1BO75841 AL021879.1-201ENST00000611756 288 ntBASIC0.81□□□□□ -2.28
UPK1BO75841 AL359075.3-201ENST00000613288 217 ntBASIC0.81□□□□□ -2.28
UPK1BO75841 SNORD87-201ENST00000364849 89 ntBASIC0.8□□□□□ -2.28
UPK1BO75841 RNU6-784P-201ENST00000384330 106 ntBASIC0.8□□□□□ -2.28
UPK1BO75841 MIR320B2-201ENST00000408479 138 ntBASIC0.8□□□□□ -2.28
UPK1BO75841 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.8□□□□□ -2.28
UPK1BO75841 AC008134.1-201ENST00000420943 193 ntBASIC0.8□□□□□ -2.28
UPK1BO75841 AC245047.3-201ENST00000429428 127 ntBASIC0.8□□□□□ -2.28
UPK1BO75841 AL445305.1-201ENST00000432577 575 ntBASIC0.8□□□□□ -2.28
UPK1BO75841 AC048334.1-201ENST00000477975 159 ntBASIC0.8□□□□□ -2.28
UPK1BO75841 SNORA31.2-201ENST00000516019 134 ntBASIC0.8□□□□□ -2.28
UPK1BO75841 MTND1P5-201ENST00000517906 940 ntBASIC0.8□□□□□ -2.28
UPK1BO75841 CPDP1-201ENST00000579660 283 ntBASIC0.8□□□□□ -2.28
UPK1BO75841 MIR4303-201ENST00000581299 66 ntBASIC0.8□□□□□ -2.28
UPK1BO75841 AC013244.2-201ENST00000603396 103 ntBASIC0.8□□□□□ -2.28
UPK1BO75841 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.8□□□□□ -2.28
UPK1BO75841 AC092807.2-201ENST00000609367 243 ntBASIC0.8□□□□□ -2.28
UPK1BO75841 AL158063.1-201ENST00000615349 536 ntBASIC0.8□□□□□ -2.28
UPK1BO75841 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
UPK1BO75841 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
UPK1BO75841 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
UPK1BO75841 Y_RNA.409-201ENST00000383990 98 ntBASIC0.79□□□□□ -2.28
UPK1BO75841 RNU6-214P-201ENST00000384130 107 ntBASIC0.79□□□□□ -2.28
UPK1BO75841 RNU6-933P-201ENST00000384424 107 ntBASIC0.79□□□□□ -2.28
UPK1BO75841 RNU6-505P-201ENST00000384427 107 ntBASIC0.79□□□□□ -2.28
UPK1BO75841 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
UPK1BO75841 RNU4-55P-201ENST00000410731 137 ntBASIC0.79□□□□□ -2.28
UPK1BO75841 AC010095.1-201ENST00000443543 144 ntBASIC0.79□□□□□ -2.28
UPK1BO75841 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.79□□□□□ -2.28
UPK1BO75841 RNU6-956P-201ENST00000458868 103 ntBASIC0.79□□□□□ -2.28
UPK1BO75841 MTCO1P29-201ENST00000496868 288 ntBASIC0.79□□□□□ -2.28
UPK1BO75841 Y_RNA.654-201ENST00000497848 106 ntBASIC0.79□□□□□ -2.28
UPK1BO75841 HMGB1P29-201ENST00000505659 499 ntBASIC0.79□□□□□ -2.28
UPK1BO75841 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.79□□□□□ -2.28
UPK1BO75841 RNU6-344P-201ENST00000516635 111 ntBASIC0.79□□□□□ -2.28
UPK1BO75841 RNU7-128P-201ENST00000517247 62 ntBASIC0.79□□□□□ -2.28
UPK1BO75841 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.79□□□□□ -2.28
UPK1BO75841 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.79□□□□□ -2.28
UPK1BO75841 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.79□□□□□ -2.28
UPK1BO75841 SNORD11B-201ENST00000607707 90 ntBASIC0.79□□□□□ -2.28
UPK1BO75841 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.79□□□□□ -2.28
UPK1BO75841 AC023510.2-201ENST00000622162 746 ntBASIC0.79□□□□□ -2.28
UPK1BO75841 SNORD3E-202ENST00000627253 216 ntBASIC0.79□□□□□ -2.28
UPK1BO75841 RNU1-17P-201ENST00000363022 152 ntBASIC0.78□□□□□ -2.28
UPK1BO75841 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
UPK1BO75841 RNU6-910P-201ENST00000390844 107 ntBASIC0.78□□□□□ -2.28
UPK1BO75841 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
UPK1BO75841 MRPL42P3-201ENST00000401492 326 ntBASIC0.78□□□□□ -2.28
UPK1BO75841 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.78□□□□□ -2.28
UPK1BO75841 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.78□□□□□ -2.28
UPK1BO75841 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.78□□□□□ -2.28
UPK1BO75841 RAB28P5-201ENST00000427490 651 ntBASIC0.78□□□□□ -2.28
UPK1BO75841 RPS6P15-201ENST00000431996 751 ntBASIC0.78□□□□□ -2.28
UPK1BO75841 RN7SKP210-201ENST00000459176 261 ntBASIC0.78□□□□□ -2.28
UPK1BO75841 BET1P1-201ENST00000482276 359 ntBASIC0.78□□□□□ -2.28
UPK1BO75841 UBL5P1-201ENST00000507979 193 ntBASIC0.78□□□□□ -2.28
UPK1BO75841 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.78□□□□□ -2.28
UPK1BO75841 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.78□□□□□ -2.28
UPK1BO75841 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.78□□□□□ -2.28
UPK1BO75841 FRG2DP-202ENST00000566967 323 ntBASIC0.78□□□□□ -2.28
UPK1BO75841 MIR4778-201ENST00000577635 80 ntBASIC0.78□□□□□ -2.28
UPK1BO75841 MIR4421-201ENST00000578133 69 ntBASIC0.78□□□□□ -2.28
UPK1BO75841 AL512598.1-201ENST00000610158 273 ntBASIC0.78□□□□□ -2.28
UPK1BO75841 AL133216.2-202ENST00000634512 349 ntBASIC0.78□□□□□ -2.28
UPK1BO75841 Y_RNA.167-201ENST00000363735 109 ntBASIC0.77□□□□□ -2.29
UPK1BO75841 SNORA69-201ENST00000383895 132 ntBASIC0.77□□□□□ -2.29
UPK1BO75841 MIR32-201ENST00000384965 70 ntBASIC0.77□□□□□ -2.29
UPK1BO75841 AL590002.1-201ENST00000406554 418 ntBASIC0.77□□□□□ -2.29
UPK1BO75841 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.77□□□□□ -2.29
UPK1BO75841 CDK8P2-201ENST00000415020 547 ntBASIC0.77□□□□□ -2.29
UPK1BO75841 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.77□□□□□ -2.29
UPK1BO75841 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.77□□□□□ -2.29
UPK1BO75841 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.77□□□□□ -2.29
UPK1BO75841 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.77□□□□□ -2.29
UPK1BO75841 Z82188.1-201ENST00000436709 154 ntBASIC0.77□□□□□ -2.29
UPK1BO75841 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.77□□□□□ -2.29
UPK1BO75841 MTND3P16-201ENST00000452205 344 ntBASIC0.77□□□□□ -2.29
UPK1BO75841 RNU6-1208P-201ENST00000459588 107 ntBASIC0.77□□□□□ -2.29
UPK1BO75841 RN7SKP298-201ENST00000515950 94 ntBASIC0.77□□□□□ -2.29
UPK1BO75841 ACA64.5-201ENST00000516207 127 ntBASIC0.77□□□□□ -2.29
UPK1BO75841 RN7SKP49-201ENST00000516675 260 ntBASIC0.77□□□□□ -2.29
UPK1BO75841 AC016957.1-201ENST00000534895 309 ntBASIC0.77□□□□□ -2.29
UPK1BO75841 AC119751.7-201ENST00000600494 245 ntBASIC0.77□□□□□ -2.29
UPK1BO75841 AL020996.3-201ENST00000606617 222 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 206.6 ms