Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CTNND1O60716 MTND5P6-201ENST00000422338 1798 ntBASIC2.79□□□□□ -1.96
CTNND1O60716 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CTNND1O60716 RNU6-743P-201ENST00000364151 106 ntBASIC2.78□□□□□ -1.96
CTNND1O60716 RNU6-793P-201ENST00000384233 104 ntBASIC2.78□□□□□ -1.96
CTNND1O60716 MIR628-201ENST00000385229 95 ntBASIC2.78□□□□□ -1.96
CTNND1O60716 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CTNND1O60716 AL357139.1-201ENST00000407792 426 ntBASIC2.78□□□□□ -1.96
CTNND1O60716 AC004866.1-201ENST00000411748 78 ntBASIC2.78□□□□□ -1.96
CTNND1O60716 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.78□□□□□ -1.96
CTNND1O60716 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CTNND1O60716 RNU6-475P-201ENST00000516073 104 ntBASIC2.78□□□□□ -1.96
CTNND1O60716 SNORA40.14-201ENST00000516543 86 ntBASIC2.78□□□□□ -1.96
CTNND1O60716 AL442163.3-201ENST00000554110 156 ntBASIC2.78□□□□□ -1.96
CTNND1O60716 AC125232.2-201ENST00000592457 143 ntBASIC2.78□□□□□ -1.96
CTNND1O60716 SNORD58B-201ENST00000607313 66 ntBASIC2.78□□□□□ -1.96
CTNND1O60716 AC010297.1-201ENST00000623948 149 ntBASIC2.78□□□□□ -1.96
CTNND1O60716 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CTNND1O60716 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
CTNND1O60716 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CTNND1O60716 Y_RNA.80-201ENST00000362996 102 ntBASIC2.77□□□□□ -1.97
CTNND1O60716 Y_RNA.132-201ENST00000363421 102 ntBASIC2.77□□□□□ -1.97
CTNND1O60716 Y_RNA.148-201ENST00000363557 117 ntBASIC2.77□□□□□ -1.97
CTNND1O60716 Y_RNA.216-201ENST00000364205 93 ntBASIC2.77□□□□□ -1.97
CTNND1O60716 Y_RNA.485-201ENST00000384395 102 ntBASIC2.77□□□□□ -1.97
CTNND1O60716 MIR329-1-201ENST00000385028 80 ntBASIC2.77□□□□□ -1.97
CTNND1O60716 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CTNND1O60716 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.77□□□□□ -1.97
CTNND1O60716 HSBP1P1-201ENST00000555205 166 ntBASIC2.77□□□□□ -1.97
CTNND1O60716 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.77□□□□□ -1.97
CTNND1O60716 ZNF72P-201ENST00000425869 1908 ntBASIC2.77□□□□□ -1.97
CTNND1O60716 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CTNND1O60716 AC131280.1-202ENST00000624067 4211 ntBASIC2.77□□□□□ -1.97
CTNND1O60716 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CTNND1O60716 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CTNND1O60716 MIR6073-201ENST00000352083 89 ntBASIC2.76□□□□□ -1.97
CTNND1O60716 RNU6-1301P-201ENST00000362724 104 ntBASIC2.76□□□□□ -1.97
CTNND1O60716 RNU1-91P-201ENST00000364746 163 ntBASIC2.76□□□□□ -1.97
CTNND1O60716 SNORD31B-201ENST00000364977 69 ntBASIC2.76□□□□□ -1.97
CTNND1O60716 RNU6-1145P-201ENST00000384246 107 ntBASIC2.76□□□□□ -1.97
CTNND1O60716 RNU6-1026P-201ENST00000384465 108 ntBASIC2.76□□□□□ -1.97
CTNND1O60716 MIR300-201ENST00000401138 83 ntBASIC2.76□□□□□ -1.97
CTNND1O60716 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.76□□□□□ -1.97
CTNND1O60716 AL160004.2-201ENST00000432935 350 ntBASIC2.76□□□□□ -1.97
CTNND1O60716 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.76□□□□□ -1.97
CTNND1O60716 AC091179.3-201ENST00000474761 144 ntBASIC2.76□□□□□ -1.97
CTNND1O60716 ATP5EP1-201ENST00000510257 156 ntBASIC2.76□□□□□ -1.97
CTNND1O60716 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.76□□□□□ -1.97
CTNND1O60716 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.76□□□□□ -1.97
CTNND1O60716 RN7SKP49-201ENST00000516675 260 ntBASIC2.76□□□□□ -1.97
CTNND1O60716 RNA5SP490-201ENST00000517141 136 ntBASIC2.76□□□□□ -1.97
CTNND1O60716 CYCSP23-201ENST00000519781 313 ntBASIC2.76□□□□□ -1.97
CTNND1O60716 RRN3P3-201ENST00000549207 578 ntBASIC2.76□□□□□ -1.97
CTNND1O60716 MIR5007-201ENST00000583098 95 ntBASIC2.76□□□□□ -1.97
CTNND1O60716 MIR5188-201ENST00000583467 113 ntBASIC2.76□□□□□ -1.97
CTNND1O60716 AC067747.1-201ENST00000608026 250 ntBASIC2.76□□□□□ -1.97
CTNND1O60716 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.76□□□□□ -1.97
CTNND1O60716 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
CTNND1O60716 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.75□□□□□ -1.97
CTNND1O60716 AC005592.1-201ENST00000566527 1640 ntBASIC2.75□□□□□ -1.97
CTNND1O60716 RNU6-438P-201ENST00000365561 103 ntBASIC2.75□□□□□ -1.97
CTNND1O60716 AC117470.1-201ENST00000381974 330 ntBASIC2.75□□□□□ -1.97
CTNND1O60716 RNU6-318P-201ENST00000384283 103 ntBASIC2.75□□□□□ -1.97
CTNND1O60716 RNU1-148P-201ENST00000384472 162 ntBASIC2.75□□□□□ -1.97
CTNND1O60716 AL033519.2-201ENST00000403958 392 ntBASIC2.75□□□□□ -1.97
CTNND1O60716 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.75□□□□□ -1.97
CTNND1O60716 RNU6-1001P-201ENST00000411265 100 ntBASIC2.75□□□□□ -1.97
CTNND1O60716 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.75□□□□□ -1.97
CTNND1O60716 AC007395.1-201ENST00000451333 677 ntBASIC2.75□□□□□ -1.97
CTNND1O60716 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.75□□□□□ -1.97
CTNND1O60716 SNORA4.4-201ENST00000515921 135 ntBASIC2.75□□□□□ -1.97
CTNND1O60716 Y_RNA.683-201ENST00000516508 93 ntBASIC2.75□□□□□ -1.97
CTNND1O60716 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.75□□□□□ -1.97
CTNND1O60716 MIR4769-201ENST00000584126 77 ntBASIC2.75□□□□□ -1.97
CTNND1O60716 MZT1P2-201ENST00000604387 248 ntBASIC2.75□□□□□ -1.97
CTNND1O60716 SNORD11B-201ENST00000607707 90 ntBASIC2.75□□□□□ -1.97
CTNND1O60716 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.75□□□□□ -1.97
CTNND1O60716 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.75□□□□□ -1.97
CTNND1O60716 MTND5P35-201ENST00000557537 1720 ntBASIC2.75□□□□□ -1.97
CTNND1O60716 AC091812.1-201ENST00000432235 1948 ntBASIC2.75□□□□□ -1.97
CTNND1O60716 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
CTNND1O60716 RNU6-545P-201ENST00000362681 104 ntBASIC2.74□□□□□ -1.97
CTNND1O60716 SNORA63-201ENST00000363450 132 ntBASIC2.74□□□□□ -1.97
CTNND1O60716 RNY3P4-201ENST00000384428 101 ntBASIC2.74□□□□□ -1.97
CTNND1O60716 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CTNND1O60716 MRPL42P3-201ENST00000401492 326 ntBASIC2.74□□□□□ -1.97
CTNND1O60716 RNA5SP181-201ENST00000410246 98 ntBASIC2.74□□□□□ -1.97
CTNND1O60716 Y_RNA.595-201ENST00000410403 105 ntBASIC2.74□□□□□ -1.97
CTNND1O60716 snoU13.23-201ENST00000458863 104 ntBASIC2.74□□□□□ -1.97
CTNND1O60716 AC093259.1-201ENST00000509755 300 ntBASIC2.74□□□□□ -1.97
CTNND1O60716 AP003072.1-201ENST00000531740 145 ntBASIC2.74□□□□□ -1.97
CTNND1O60716 PRELID2P1-201ENST00000552837 301 ntBASIC2.74□□□□□ -1.97
CTNND1O60716 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.74□□□□□ -1.97
CTNND1O60716 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
CTNND1O60716 AC016925.2-201ENST00000605108 242 ntBASIC2.74□□□□□ -1.97
CTNND1O60716 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CTNND1O60716 Y_RNA.27-201ENST00000362540 103 ntBASIC2.73□□□□□ -1.97
CTNND1O60716 RNA5SP361-201ENST00000362686 118 ntBASIC2.73□□□□□ -1.97
CTNND1O60716 SNORD114-1-201ENST00000362705 72 ntBASIC2.73□□□□□ -1.97
CTNND1O60716 SNORA67.2-201ENST00000384300 149 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms