Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.96□□□□□ -1.94
KDM1AO60341 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.96□□□□□ -1.94
KDM1AO60341 RNA5SP76-201ENST00000516277 87 ntBASIC2.96□□□□□ -1.94
KDM1AO60341 RNU6-1338P-201ENST00000516328 91 ntBASIC2.96□□□□□ -1.94
KDM1AO60341 RNU6-107P-201ENST00000516643 102 ntBASIC2.96□□□□□ -1.94
KDM1AO60341 SNORA48.11-201ENST00000517015 89 ntBASIC2.96□□□□□ -1.94
KDM1AO60341 DEFB108E-201ENST00000524692 240 ntBASIC2.96□□□□□ -1.94
KDM1AO60341 AL109918.3-201ENST00000603072 338 ntBASIC2.96□□□□□ -1.94
KDM1AO60341 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.96□□□□□ -1.94
KDM1AO60341 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
KDM1AO60341 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.96□□□□□ -1.94
KDM1AO60341 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
KDM1AO60341 MTND5P6-201ENST00000422338 1798 ntBASIC2.95□□□□□ -1.94
KDM1AO60341 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
KDM1AO60341 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
KDM1AO60341 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
KDM1AO60341 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
KDM1AO60341 U3.8-201ENST00000363675 217 ntBASIC2.95□□□□□ -1.94
KDM1AO60341 Y_RNA.331-201ENST00000365267 102 ntBASIC2.95□□□□□ -1.94
KDM1AO60341 MIR586-201ENST00000385035 97 ntBASIC2.95□□□□□ -1.94
KDM1AO60341 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
KDM1AO60341 SNORD67-201ENST00000390833 111 ntBASIC2.95□□□□□ -1.94
KDM1AO60341 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.95□□□□□ -1.94
KDM1AO60341 EEF1B2P7-201ENST00000451177 676 ntBASIC2.95□□□□□ -1.94
KDM1AO60341 AC005042.3-201ENST00000453230 174 ntBASIC2.95□□□□□ -1.94
KDM1AO60341 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.95□□□□□ -1.94
KDM1AO60341 AC107222.1-201ENST00000510899 637 ntBASIC2.95□□□□□ -1.94
KDM1AO60341 AP002001.1-203ENST00000534002 267 ntBASIC2.95□□□□□ -1.94
KDM1AO60341 MIR3117-201ENST00000584034 78 ntBASIC2.95□□□□□ -1.94
KDM1AO60341 AC012433.1-201ENST00000588916 398 ntBASIC2.95□□□□□ -1.94
KDM1AO60341 AC091932.3-201ENST00000624223 323 ntBASIC2.95□□□□□ -1.94
KDM1AO60341 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
KDM1AO60341 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
KDM1AO60341 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
KDM1AO60341 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
KDM1AO60341 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.94□□□□□ -1.94
KDM1AO60341 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.94□□□□□ -1.94
KDM1AO60341 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.94□□□□□ -1.94
KDM1AO60341 RNU6-1026P-201ENST00000384465 108 ntBASIC2.94□□□□□ -1.94
KDM1AO60341 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
KDM1AO60341 MIR548H3-201ENST00000408771 118 ntBASIC2.94□□□□□ -1.94
KDM1AO60341 RNA5SP475-201ENST00000410568 110 ntBASIC2.94□□□□□ -1.94
KDM1AO60341 RPL23AP36-201ENST00000413895 458 ntBASIC2.94□□□□□ -1.94
KDM1AO60341 TOMM22P2-201ENST00000430735 237 ntBASIC2.94□□□□□ -1.94
KDM1AO60341 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.94□□□□□ -1.94
KDM1AO60341 NDUFB4P10-201ENST00000452541 359 ntBASIC2.94□□□□□ -1.94
KDM1AO60341 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.94□□□□□ -1.94
KDM1AO60341 RNU7-14P-201ENST00000459331 62 ntBASIC2.94□□□□□ -1.94
KDM1AO60341 HMGB3P17-201ENST00000504195 649 ntBASIC2.94□□□□□ -1.94
KDM1AO60341 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.94□□□□□ -1.94
KDM1AO60341 AC091826.1-201ENST00000514065 313 ntBASIC2.94□□□□□ -1.94
KDM1AO60341 AC008885.1-201ENST00000514930 301 ntBASIC2.94□□□□□ -1.94
KDM1AO60341 RNA5SP341-201ENST00000516261 117 ntBASIC2.94□□□□□ -1.94
KDM1AO60341 AC109329.2-201ENST00000519658 482 ntBASIC2.94□□□□□ -1.94
KDM1AO60341 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.94□□□□□ -1.94
KDM1AO60341 RPL12P50-201ENST00000603116 116 ntBASIC2.94□□□□□ -1.94
KDM1AO60341 AC022441.3-201ENST00000605737 136 ntBASIC2.94□□□□□ -1.94
KDM1AO60341 IGHVIII-44-202ENST00000636235 289 ntBASIC2.94□□□□□ -1.94
KDM1AO60341 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
KDM1AO60341 AL161431.1-201ENST00000618966 4205 ntBASIC2.94□□□□□ -1.94
KDM1AO60341 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.94□□□□□ -1.94
KDM1AO60341 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
KDM1AO60341 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.94□□□□□ -1.94
KDM1AO60341 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.93□□□□□ -1.94
KDM1AO60341 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.93□□□□□ -1.94
KDM1AO60341 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.93□□□□□ -1.94
KDM1AO60341 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
KDM1AO60341 RNU1-23P-201ENST00000363361 144 ntBASIC2.93□□□□□ -1.94
KDM1AO60341 RNA5SP393-201ENST00000363423 117 ntBASIC2.93□□□□□ -1.94
KDM1AO60341 RNU6-1305P-201ENST00000364353 104 ntBASIC2.93□□□□□ -1.94
KDM1AO60341 SNORA9.2-201ENST00000365361 133 ntBASIC2.93□□□□□ -1.94
KDM1AO60341 RNU6-546P-201ENST00000383991 107 ntBASIC2.93□□□□□ -1.94
KDM1AO60341 MIR627-201ENST00000384979 97 ntBASIC2.93□□□□□ -1.94
KDM1AO60341 MIR300-201ENST00000401138 83 ntBASIC2.93□□□□□ -1.94
KDM1AO60341 SNORD88.1-201ENST00000408684 91 ntBASIC2.93□□□□□ -1.94
KDM1AO60341 RNU2-32P-201ENST00000411193 191 ntBASIC2.93□□□□□ -1.94
KDM1AO60341 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.93□□□□□ -1.94
KDM1AO60341 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.93□□□□□ -1.94
KDM1AO60341 HMGN2P9-201ENST00000476875 229 ntBASIC2.93□□□□□ -1.94
KDM1AO60341 RN7SL633P-201ENST00000488974 297 ntBASIC2.93□□□□□ -1.94
KDM1AO60341 ATP5EP1-201ENST00000510257 156 ntBASIC2.93□□□□□ -1.94
KDM1AO60341 Y_RNA.680-201ENST00000516441 93 ntBASIC2.93□□□□□ -1.94
KDM1AO60341 RNU6-965P-201ENST00000516721 96 ntBASIC2.93□□□□□ -1.94
KDM1AO60341 SNORA31.15-201ENST00000516771 132 ntBASIC2.93□□□□□ -1.94
KDM1AO60341 AC022616.8-201ENST00000533569 253 ntBASIC2.93□□□□□ -1.94
KDM1AO60341 AC090616.3-201ENST00000582184 217 ntBASIC2.93□□□□□ -1.94
KDM1AO60341 AL161756.2-201ENST00000604597 246 ntBASIC2.93□□□□□ -1.94
KDM1AO60341 AC004467.1-201ENST00000615678 330 ntBASIC2.93□□□□□ -1.94
KDM1AO60341 AL590240.4-201ENST00000616908 390 ntBASIC2.93□□□□□ -1.94
KDM1AO60341 AC006001.4-201ENST00000622243 395 ntBASIC2.93□□□□□ -1.94
KDM1AO60341 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.93□□□□□ -1.94
KDM1AO60341 AL035425.3-201ENST00000564206 4996 ntBASIC2.93□□□□□ -1.94
KDM1AO60341 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
KDM1AO60341 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
KDM1AO60341 Y_RNA.60-201ENST00000362831 98 ntBASIC2.92□□□□□ -1.94
KDM1AO60341 Y_RNA.101-201ENST00000363154 102 ntBASIC2.92□□□□□ -1.94
KDM1AO60341 RNU6-379P-201ENST00000363813 104 ntBASIC2.92□□□□□ -1.94
KDM1AO60341 SNORA9-201ENST00000384215 133 ntBASIC2.92□□□□□ -1.94
KDM1AO60341 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
KDM1AO60341 SNORA53-201ENST00000391141 249 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms