Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 Y_RNA.167-201ENST00000363735 109 ntBASIC0.97□□□□□ -2.25
LSM1O15116 MIR19B1-201ENST00000384829 87 ntBASIC0.97□□□□□ -2.25
LSM1O15116 MIR450B-201ENST00000401182 78 ntBASIC0.97□□□□□ -2.25
LSM1O15116 FGF7P8-201ENST00000402994 292 ntBASIC0.97□□□□□ -2.25
LSM1O15116 RNU6-57P-201ENST00000411348 103 ntBASIC0.97□□□□□ -2.25
LSM1O15116 SNRPEP10-201ENST00000420249 274 ntBASIC0.97□□□□□ -2.25
LSM1O15116 RAB28P5-201ENST00000427490 651 ntBASIC0.97□□□□□ -2.25
LSM1O15116 USP9YP29-201ENST00000445112 563 ntBASIC0.97□□□□□ -2.25
LSM1O15116 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.97□□□□□ -2.25
LSM1O15116 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.97□□□□□ -2.25
LSM1O15116 UBL5P1-201ENST00000507979 193 ntBASIC0.97□□□□□ -2.25
LSM1O15116 SUMO2P16-201ENST00000519475 264 ntBASIC0.97□□□□□ -2.25
LSM1O15116 AC104576.1-201ENST00000524225 88 ntBASIC0.97□□□□□ -2.25
LSM1O15116 AL157687.1-201ENST00000554853 619 ntBASIC0.97□□□□□ -2.25
LSM1O15116 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.97□□□□□ -2.25
LSM1O15116 AC136932.1-201ENST00000574771 208 ntBASIC0.97□□□□□ -2.25
LSM1O15116 MIR5695-201ENST00000579717 85 ntBASIC0.97□□□□□ -2.25
LSM1O15116 AL020996.3-201ENST00000606617 222 ntBASIC0.97□□□□□ -2.25
LSM1O15116 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
LSM1O15116 RNU4-38P-201ENST00000364472 129 ntBASIC0.96□□□□□ -2.26
LSM1O15116 RNU6-38P-201ENST00000384085 107 ntBASIC0.96□□□□□ -2.26
LSM1O15116 SNORA75-201ENST00000384158 137 ntBASIC0.96□□□□□ -2.26
LSM1O15116 RN7SKP142-201ENST00000411236 328 ntBASIC0.96□□□□□ -2.26
LSM1O15116 AL663109.1-201ENST00000411498 844 ntBASIC0.96□□□□□ -2.26
LSM1O15116 AC010154.1-201ENST00000425857 269 ntBASIC0.96□□□□□ -2.26
LSM1O15116 AC074290.1-201ENST00000448883 135 ntBASIC0.96□□□□□ -2.26
LSM1O15116 AC087343.1-201ENST00000477341 475 ntBASIC0.96□□□□□ -2.26
LSM1O15116 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
LSM1O15116 AC025423.5-201ENST00000550230 219 ntBASIC0.96□□□□□ -2.26
LSM1O15116 AC087752.4-201ENST00000605911 462 ntBASIC0.96□□□□□ -2.26
LSM1O15116 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.96□□□□□ -2.26
LSM1O15116 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
LSM1O15116 MTCO1P20-201ENST00000425366 358 ntBASIC0.95□□□□□ -2.26
LSM1O15116 AC073464.1-201ENST00000429823 534 ntBASIC0.95□□□□□ -2.26
LSM1O15116 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.95□□□□□ -2.26
LSM1O15116 AL606489.2-201ENST00000433886 234 ntBASIC0.95□□□□□ -2.26
LSM1O15116 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.95□□□□□ -2.26
LSM1O15116 AL359672.1-201ENST00000442302 409 ntBASIC0.95□□□□□ -2.26
LSM1O15116 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.95□□□□□ -2.26
LSM1O15116 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.95□□□□□ -2.26
LSM1O15116 HMGB1P29-201ENST00000505659 499 ntBASIC0.95□□□□□ -2.26
LSM1O15116 AC092436.3-201ENST00000511788 257 ntBASIC0.95□□□□□ -2.26
LSM1O15116 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.95□□□□□ -2.26
LSM1O15116 AC146944.4-201ENST00000602697 718 ntBASIC0.95□□□□□ -2.26
LSM1O15116 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.95□□□□□ -2.26
LSM1O15116 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.95□□□□□ -2.26
LSM1O15116 MIR8076-201ENST00000611401 83 ntBASIC0.95□□□□□ -2.26
LSM1O15116 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.95□□□□□ -2.26
LSM1O15116 MIR8054-201ENST00000620877 86 ntBASIC0.95□□□□□ -2.26
LSM1O15116 Y_RNA.169-201ENST00000363745 96 ntBASIC0.94□□□□□ -2.26
LSM1O15116 SNORD115-8-201ENST00000363856 82 ntBASIC0.94□□□□□ -2.26
LSM1O15116 SNORD115-38-201ENST00000365037 82 ntBASIC0.94□□□□□ -2.26
LSM1O15116 Y_RNA.327-201ENST00000365201 102 ntBASIC0.94□□□□□ -2.26
LSM1O15116 Y_RNA.378-201ENST00000365652 113 ntBASIC0.94□□□□□ -2.26
LSM1O15116 RNY3P9-201ENST00000384727 106 ntBASIC0.94□□□□□ -2.26
LSM1O15116 RNU6-325P-201ENST00000411132 105 ntBASIC0.94□□□□□ -2.26
LSM1O15116 RNU6-1054P-201ENST00000411293 104 ntBASIC0.94□□□□□ -2.26
LSM1O15116 AC092991.1-201ENST00000477176 376 ntBASIC0.94□□□□□ -2.26
LSM1O15116 RN7SKP49-201ENST00000516675 260 ntBASIC0.94□□□□□ -2.26
LSM1O15116 MTND1P5-201ENST00000517906 940 ntBASIC0.94□□□□□ -2.26
LSM1O15116 LRRC34P1-201ENST00000542742 915 ntBASIC0.94□□□□□ -2.26
LSM1O15116 AC092747.3-201ENST00000603769 301 ntBASIC0.94□□□□□ -2.26
LSM1O15116 AC097065.2-201ENST00000608159 533 ntBASIC0.94□□□□□ -2.26
LSM1O15116 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
LSM1O15116 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
LSM1O15116 RNU6-1240P-201ENST00000365155 104 ntBASIC0.93□□□□□ -2.26
LSM1O15116 RNU6-505P-201ENST00000384427 107 ntBASIC0.93□□□□□ -2.26
LSM1O15116 MIR222-201ENST00000384992 110 ntBASIC0.93□□□□□ -2.26
LSM1O15116 MIR487A-201ENST00000385009 80 ntBASIC0.93□□□□□ -2.26
LSM1O15116 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
LSM1O15116 MIR1253-201ENST00000408273 105 ntBASIC0.93□□□□□ -2.26
LSM1O15116 AC008134.1-201ENST00000420943 193 ntBASIC0.93□□□□□ -2.26
LSM1O15116 SRRM1P2-201ENST00000464531 1192 ntBASIC0.93□□□□□ -2.26
LSM1O15116 RPL23AP75-201ENST00000491601 451 ntBASIC0.93□□□□□ -2.26
LSM1O15116 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.93□□□□□ -2.26
LSM1O15116 AC004584.2-201ENST00000570407 410 ntBASIC0.93□□□□□ -2.26
LSM1O15116 AC100830.2-201ENST00000581636 240 ntBASIC0.93□□□□□ -2.26
LSM1O15116 AL359075.3-201ENST00000613288 217 ntBASIC0.93□□□□□ -2.26
LSM1O15116 AL078596.1-201ENST00000624856 447 ntBASIC0.93□□□□□ -2.26
LSM1O15116 AL133216.2-202ENST00000634512 349 ntBASIC0.93□□□□□ -2.26
LSM1O15116 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.93□□□□□ -2.26
LSM1O15116 RNU4-20P-201ENST00000365601 151 ntBASIC0.92□□□□□ -2.26
LSM1O15116 Y_RNA.381-201ENST00000365666 102 ntBASIC0.92□□□□□ -2.26
LSM1O15116 RNA5SP323-201ENST00000391094 133 ntBASIC0.92□□□□□ -2.26
LSM1O15116 RN7SKP200-201ENST00000410564 320 ntBASIC0.92□□□□□ -2.26
LSM1O15116 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.92□□□□□ -2.26
LSM1O15116 AC005002.2-201ENST00000438228 269 ntBASIC0.92□□□□□ -2.26
LSM1O15116 NDUFB4P10-201ENST00000452541 359 ntBASIC0.92□□□□□ -2.26
LSM1O15116 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.92□□□□□ -2.26
LSM1O15116 Y_RNA.654-201ENST00000497848 106 ntBASIC0.92□□□□□ -2.26
LSM1O15116 RNU6-1038P-201ENST00000516516 104 ntBASIC0.92□□□□□ -2.26
LSM1O15116 RNU1-142P-201ENST00000516682 145 ntBASIC0.92□□□□□ -2.26
LSM1O15116 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.92□□□□□ -2.26
LSM1O15116 MIR4498-201ENST00000577599 66 ntBASIC0.92□□□□□ -2.26
LSM1O15116 AL513534.2-201ENST00000603836 250 ntBASIC0.92□□□□□ -2.26
LSM1O15116 AL359821.1-201ENST00000605519 182 ntBASIC0.92□□□□□ -2.26
LSM1O15116 AC017083.3-201ENST00000609955 700 ntBASIC0.92□□□□□ -2.26
LSM1O15116 AL121757.2-201ENST00000611223 313 ntBASIC0.92□□□□□ -2.26
LSM1O15116 FAM157A-202ENST00000615155 405 ntBASIC0.92□□□□□ -2.26
LSM1O15116 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 154.4 ms