Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.53□□□□□ -2.49
HMGN4O00479 AC092447.9-201ENST00000603395 144 ntBASIC-0.53□□□□□ -2.49
HMGN4O00479 AC024060.1-201ENST00000607052 494 ntBASIC-0.53□□□□□ -2.49
HMGN4O00479 AC097478.2-201ENST00000610572 514 ntBASIC-0.53□□□□□ -2.49
HMGN4O00479 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-0.53□□□□□ -2.49
HMGN4O00479 AL359547.2-201ENST00000615810 418 ntBASIC-0.53□□□□□ -2.49
HMGN4O00479 AL356596.1-201ENST00000624230 379 ntBASIC-0.53□□□□□ -2.49
HMGN4O00479 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.53□□□□□ -2.49
HMGN4O00479 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.53□□□□□ -2.49
HMGN4O00479 RNU6-369P-201ENST00000362515 102 ntBASIC-0.54□□□□□ -2.5
HMGN4O00479 RNU6-883P-201ENST00000384597 107 ntBASIC-0.54□□□□□ -2.5
HMGN4O00479 RNU6-127P-201ENST00000390897 107 ntBASIC-0.54□□□□□ -2.5
HMGN4O00479 PCNPP3-201ENST00000393579 471 ntBASIC-0.54□□□□□ -2.5
HMGN4O00479 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.54□□□□□ -2.5
HMGN4O00479 MED13P1-201ENST00000428342 171 ntBASIC-0.54□□□□□ -2.5
HMGN4O00479 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.54□□□□□ -2.5
HMGN4O00479 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC-0.54□□□□□ -2.5
HMGN4O00479 MTCO1P27-201ENST00000448269 226 ntBASIC-0.54□□□□□ -2.5
HMGN4O00479 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.54□□□□□ -2.5
HMGN4O00479 AC005176.2-201ENST00000596933 147 ntBASIC-0.54□□□□□ -2.5
HMGN4O00479 AL117336.2-201ENST00000602435 335 ntBASIC-0.54□□□□□ -2.5
HMGN4O00479 AL158042.1-201ENST00000605338 460 ntBASIC-0.54□□□□□ -2.5
HMGN4O00479 AC007684.1-201ENST00000609671 477 ntBASIC-0.54□□□□□ -2.5
HMGN4O00479 RNU6-552P-201ENST00000362869 119 ntBASIC-0.55□□□□□ -2.5
HMGN4O00479 U3.4-201ENST00000363352 213 ntBASIC-0.55□□□□□ -2.5
HMGN4O00479 RNU6-511P-201ENST00000363496 107 ntBASIC-0.55□□□□□ -2.5
HMGN4O00479 RNU6-692P-201ENST00000384496 107 ntBASIC-0.55□□□□□ -2.5
HMGN4O00479 RNU6-293P-201ENST00000411259 106 ntBASIC-0.55□□□□□ -2.5
HMGN4O00479 ELOCP17-201ENST00000414751 326 ntBASIC-0.55□□□□□ -2.5
HMGN4O00479 AL031779.1-201ENST00000415663 330 ntBASIC-0.55□□□□□ -2.5
HMGN4O00479 RNU7-94P-201ENST00000459576 63 ntBASIC-0.55□□□□□ -2.5
HMGN4O00479 RNU7-12P-201ENST00000516030 62 ntBASIC-0.55□□□□□ -2.5
HMGN4O00479 RNU6-1102P-201ENST00000516149 96 ntBASIC-0.55□□□□□ -2.5
HMGN4O00479 RNU6-567P-201ENST00000516746 107 ntBASIC-0.55□□□□□ -2.5
HMGN4O00479 RNU7-128P-201ENST00000517247 62 ntBASIC-0.55□□□□□ -2.5
HMGN4O00479 IGLVI-20-201ENST00000519296 130 ntBASIC-0.55□□□□□ -2.5
HMGN4O00479 DEFB131C-201ENST00000528817 165 ntBASIC-0.55□□□□□ -2.5
HMGN4O00479 MIR3912-201ENST00000577566 105 ntBASIC-0.55□□□□□ -2.5
HMGN4O00479 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-0.55□□□□□ -2.5
HMGN4O00479 AC099785.1-201ENST00000605697 437 ntBASIC-0.55□□□□□ -2.5
HMGN4O00479 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.56□□□□□ -2.5
HMGN4O00479 SNORA18.1-201ENST00000363418 128 ntBASIC-0.56□□□□□ -2.5
HMGN4O00479 SNORD32A-201ENST00000364805 84 ntBASIC-0.56□□□□□ -2.5
HMGN4O00479 MIR208B-201ENST00000401172 77 ntBASIC-0.56□□□□□ -2.5
HMGN4O00479 MIR320C1-201ENST00000408566 88 ntBASIC-0.56□□□□□ -2.5
HMGN4O00479 AC019070.1-201ENST00000415008 1024 ntBASIC-0.56□□□□□ -2.5
HMGN4O00479 AL133396.1-201ENST00000432048 687 ntBASIC-0.56□□□□□ -2.5
HMGN4O00479 AL360271.2-201ENST00000447710 161 ntBASIC-0.56□□□□□ -2.5
HMGN4O00479 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-0.56□□□□□ -2.5
HMGN4O00479 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.56□□□□□ -2.5
HMGN4O00479 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.56□□□□□ -2.5
HMGN4O00479 MIR8064-201ENST00000612863 90 ntBASIC-0.56□□□□□ -2.5
HMGN4O00479 SNORD114-31-201ENST00000363219 75 ntBASIC-0.57□□□□□ -2.5
HMGN4O00479 MIR526A1-201ENST00000384897 85 ntBASIC-0.57□□□□□ -2.5
HMGN4O00479 MIR892B-201ENST00000401279 77 ntBASIC-0.57□□□□□ -2.5
HMGN4O00479 MIR548H2-201ENST00000408874 88 ntBASIC-0.57□□□□□ -2.5
HMGN4O00479 AC090960.1-201ENST00000421072 306 ntBASIC-0.57□□□□□ -2.5
HMGN4O00479 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.57□□□□□ -2.5
HMGN4O00479 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.57□□□□□ -2.5
HMGN4O00479 HSFY5P-201ENST00000453726 309 ntBASIC-0.57□□□□□ -2.5
HMGN4O00479 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.57□□□□□ -2.5
HMGN4O00479 TRBVB-201ENST00000477100 408 ntBASIC-0.57□□□□□ -2.5
HMGN4O00479 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.57□□□□□ -2.5
HMGN4O00479 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.57□□□□□ -2.5
HMGN4O00479 MIR4645-201ENST00000583158 77 ntBASIC-0.57□□□□□ -2.5
HMGN4O00479 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.57□□□□□ -2.5
HMGN4O00479 SNORD114-28-201ENST00000363610 72 ntBASIC-0.58□□□□□ -2.5
HMGN4O00479 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.58□□□□□ -2.5
HMGN4O00479 SNORA1.1-201ENST00000364671 133 ntBASIC-0.58□□□□□ -2.5
HMGN4O00479 RNU6-923P-201ENST00000364753 107 ntBASIC-0.58□□□□□ -2.5
HMGN4O00479 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.58□□□□□ -2.5
HMGN4O00479 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.58□□□□□ -2.5
HMGN4O00479 RNU2-62P-201ENST00000410868 191 ntBASIC-0.58□□□□□ -2.5
HMGN4O00479 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.58□□□□□ -2.5
HMGN4O00479 AL353997.1-201ENST00000432936 108 ntBASIC-0.58□□□□□ -2.5
HMGN4O00479 RNU7-56P-201ENST00000458744 62 ntBASIC-0.58□□□□□ -2.5
HMGN4O00479 AC079395.1-201ENST00000510981 262 ntBASIC-0.58□□□□□ -2.5
HMGN4O00479 RNU2-46P-201ENST00000517038 113 ntBASIC-0.58□□□□□ -2.5
HMGN4O00479 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.58□□□□□ -2.5
HMGN4O00479 MIR5697-201ENST00000578045 78 ntBASIC-0.58□□□□□ -2.5
HMGN4O00479 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.58□□□□□ -2.5
HMGN4O00479 AL136221.1-201ENST00000621449 509 ntBASIC-0.58□□□□□ -2.5
HMGN4O00479 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.58□□□□□ -2.5
HMGN4O00479 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.59□□□□□ -2.5
HMGN4O00479 RNA5SP457-201ENST00000363657 124 ntBASIC-0.59□□□□□ -2.5
HMGN4O00479 RNU6-654P-201ENST00000364373 107 ntBASIC-0.59□□□□□ -2.5
HMGN4O00479 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.59□□□□□ -2.5
HMGN4O00479 RNY3P13-201ENST00000365542 102 ntBASIC-0.59□□□□□ -2.5
HMGN4O00479 SNORA2B-201ENST00000384583 137 ntBASIC-0.59□□□□□ -2.5
HMGN4O00479 AC074290.1-201ENST00000448883 135 ntBASIC-0.59□□□□□ -2.5
HMGN4O00479 AC010486.2-201ENST00000505572 483 ntBASIC-0.59□□□□□ -2.5
HMGN4O00479 AC114811.1-201ENST00000507207 168 ntBASIC-0.59□□□□□ -2.5
HMGN4O00479 RNU7-99P-201ENST00000516271 62 ntBASIC-0.59□□□□□ -2.5
HMGN4O00479 DEFB130C-202ENST00000530001 230 ntBASIC-0.59□□□□□ -2.5
HMGN4O00479 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.6□□□□□ -2.51
HMGN4O00479 RNU2-3P-201ENST00000410144 191 ntBASIC-0.6□□□□□ -2.51
HMGN4O00479 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.6□□□□□ -2.51
HMGN4O00479 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.6□□□□□ -2.51
HMGN4O00479 AL158053.1-201ENST00000441503 453 ntBASIC-0.6□□□□□ -2.51
HMGN4O00479 AC013470.1-201ENST00000453438 462 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms