Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 Y_RNA.380-201ENST00000365663 111 ntBASIC2.72□□□□□ -1.97
FOXN3O00409 Y_RNA.461-201ENST00000384263 103 ntBASIC2.72□□□□□ -1.97
FOXN3O00409 RNU6-159P-201ENST00000391080 106 ntBASIC2.72□□□□□ -1.97
FOXN3O00409 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.72□□□□□ -1.97
FOXN3O00409 UBE2DNL-203ENST00000474922 222 ntBASIC2.72□□□□□ -1.97
FOXN3O00409 RPS23P5-201ENST00000495419 428 ntBASIC2.72□□□□□ -1.97
FOXN3O00409 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.72□□□□□ -1.97
FOXN3O00409 RPL23AP94-201ENST00000512518 302 ntBASIC2.72□□□□□ -1.97
FOXN3O00409 RNU6-991P-201ENST00000516168 107 ntBASIC2.72□□□□□ -1.97
FOXN3O00409 RNU6-911P-201ENST00000516523 104 ntBASIC2.72□□□□□ -1.97
FOXN3O00409 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.72□□□□□ -1.97
FOXN3O00409 MIR5092-201ENST00000583139 88 ntBASIC2.72□□□□□ -1.97
FOXN3O00409 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.72□□□□□ -1.97
FOXN3O00409 AL356575.1-201ENST00000603008 283 ntBASIC2.72□□□□□ -1.97
FOXN3O00409 AL390123.1-201ENST00000603216 237 ntBASIC2.72□□□□□ -1.97
FOXN3O00409 AC025754.2-201ENST00000606491 432 ntBASIC2.72□□□□□ -1.97
FOXN3O00409 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.72□□□□□ -1.97
FOXN3O00409 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
FOXN3O00409 AC245060.5-201ENST00000610778 3293 ntBASIC2.71□□□□□ -1.98
FOXN3O00409 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.71□□□□□ -1.98
FOXN3O00409 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
FOXN3O00409 Y_RNA.105-201ENST00000363182 111 ntBASIC2.71□□□□□ -1.98
FOXN3O00409 Y_RNA.152-201ENST00000363578 100 ntBASIC2.71□□□□□ -1.98
FOXN3O00409 Y_RNA.188-201ENST00000363952 111 ntBASIC2.71□□□□□ -1.98
FOXN3O00409 Y_RNA.214-201ENST00000364201 112 ntBASIC2.71□□□□□ -1.98
FOXN3O00409 RNU6-234P-201ENST00000365229 104 ntBASIC2.71□□□□□ -1.98
FOXN3O00409 RNU6-1318P-201ENST00000365389 103 ntBASIC2.71□□□□□ -1.98
FOXN3O00409 RNU6-1026P-201ENST00000384465 108 ntBASIC2.71□□□□□ -1.98
FOXN3O00409 Y_RNA.510-201ENST00000384511 114 ntBASIC2.71□□□□□ -1.98
FOXN3O00409 MIR10B-201ENST00000385011 110 ntBASIC2.71□□□□□ -1.98
FOXN3O00409 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.71□□□□□ -1.98
FOXN3O00409 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.71□□□□□ -1.98
FOXN3O00409 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.71□□□□□ -1.98
FOXN3O00409 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.71□□□□□ -1.98
FOXN3O00409 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.71□□□□□ -1.98
FOXN3O00409 RNU6-1114P-201ENST00000516022 107 ntBASIC2.71□□□□□ -1.98
FOXN3O00409 RNU6-570P-201ENST00000517051 105 ntBASIC2.71□□□□□ -1.98
FOXN3O00409 MIR2355-201ENST00000517199 87 ntBASIC2.71□□□□□ -1.98
FOXN3O00409 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.71□□□□□ -1.98
FOXN3O00409 AC091144.1-201ENST00000519573 138 ntBASIC2.71□□□□□ -1.98
FOXN3O00409 AC093023.1-201ENST00000547375 507 ntBASIC2.71□□□□□ -1.98
FOXN3O00409 AC026470.2-201ENST00000561492 181 ntBASIC2.71□□□□□ -1.98
FOXN3O00409 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.71□□□□□ -1.98
FOXN3O00409 RPS29P30-201ENST00000600975 111 ntBASIC2.71□□□□□ -1.98
FOXN3O00409 TCL6_2.1-201ENST00000615162 119 ntBASIC2.71□□□□□ -1.98
FOXN3O00409 AC245884.12-201ENST00000615364 59 ntBASIC2.71□□□□□ -1.98
FOXN3O00409 MIR203B-201ENST00000636080 86 ntBASIC2.71□□□□□ -1.98
FOXN3O00409 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.71□□□□□ -1.98
FOXN3O00409 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.7□□□□□ -1.98
FOXN3O00409 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
FOXN3O00409 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
FOXN3O00409 RNU6-280P-201ENST00000364145 104 ntBASIC2.7□□□□□ -1.98
FOXN3O00409 RNU4-50P-201ENST00000364361 141 ntBASIC2.7□□□□□ -1.98
FOXN3O00409 Y_RNA.483-201ENST00000384380 101 ntBASIC2.7□□□□□ -1.98
FOXN3O00409 Y_RNA.500-201ENST00000384466 111 ntBASIC2.7□□□□□ -1.98
FOXN3O00409 AL033519.2-201ENST00000403958 392 ntBASIC2.7□□□□□ -1.98
FOXN3O00409 RNU6-130P-201ENST00000411112 103 ntBASIC2.7□□□□□ -1.98
FOXN3O00409 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.7□□□□□ -1.98
FOXN3O00409 ARL5AP4-201ENST00000430731 512 ntBASIC2.7□□□□□ -1.98
FOXN3O00409 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.7□□□□□ -1.98
FOXN3O00409 AC018868.1-201ENST00000491307 315 ntBASIC2.7□□□□□ -1.98
FOXN3O00409 AC010469.2-201ENST00000496412 480 ntBASIC2.7□□□□□ -1.98
FOXN3O00409 SNORA40.15-201ENST00000516884 107 ntBASIC2.7□□□□□ -1.98
FOXN3O00409 RNU6-897P-201ENST00000517135 105 ntBASIC2.7□□□□□ -1.98
FOXN3O00409 RNA5SP490-201ENST00000517141 136 ntBASIC2.7□□□□□ -1.98
FOXN3O00409 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.7□□□□□ -1.98
FOXN3O00409 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.7□□□□□ -1.98
FOXN3O00409 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
FOXN3O00409 AC125232.2-201ENST00000592457 143 ntBASIC2.7□□□□□ -1.98
FOXN3O00409 MIR7106-201ENST00000612419 65 ntBASIC2.7□□□□□ -1.98
FOXN3O00409 BX322639.1-202ENST00000423987 2213 ntBASIC2.7□□□□□ -1.98
FOXN3O00409 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.69□□□□□ -1.98
FOXN3O00409 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
FOXN3O00409 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
FOXN3O00409 Y_RNA.19-201ENST00000362462 99 ntBASIC2.69□□□□□ -1.98
FOXN3O00409 RNA5SP361-201ENST00000362686 118 ntBASIC2.69□□□□□ -1.98
FOXN3O00409 SNORD115-3-201ENST00000363100 82 ntBASIC2.69□□□□□ -1.98
FOXN3O00409 SNORA25.6-201ENST00000364121 118 ntBASIC2.69□□□□□ -1.98
FOXN3O00409 RNU6-438P-201ENST00000365561 103 ntBASIC2.69□□□□□ -1.98
FOXN3O00409 RNU6-472P-201ENST00000384299 107 ntBASIC2.69□□□□□ -1.98
FOXN3O00409 MT-TW-201ENST00000387382 68 ntBASIC2.69□□□□□ -1.98
FOXN3O00409 RNA5SP213-201ENST00000391031 106 ntBASIC2.69□□□□□ -1.98
FOXN3O00409 RNU1-139P-201ENST00000391307 165 ntBASIC2.69□□□□□ -1.98
FOXN3O00409 RNU6-1001P-201ENST00000411265 100 ntBASIC2.69□□□□□ -1.98
FOXN3O00409 RPL21P38-201ENST00000418090 167 ntBASIC2.69□□□□□ -1.98
FOXN3O00409 AC063976.3-201ENST00000426849 329 ntBASIC2.69□□□□□ -1.98
FOXN3O00409 RPEP5-201ENST00000441137 268 ntBASIC2.69□□□□□ -1.98
FOXN3O00409 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.69□□□□□ -1.98
FOXN3O00409 AC132942.1-201ENST00000486753 483 ntBASIC2.69□□□□□ -1.98
FOXN3O00409 ATP5EP1-201ENST00000510257 156 ntBASIC2.69□□□□□ -1.98
FOXN3O00409 RNA5SP82-201ENST00000516707 92 ntBASIC2.69□□□□□ -1.98
FOXN3O00409 AC018630.3-201ENST00000542637 96 ntBASIC2.69□□□□□ -1.98
FOXN3O00409 AC004486.1-201ENST00000546846 233 ntBASIC2.69□□□□□ -1.98
FOXN3O00409 MIR4319-201ENST00000577285 85 ntBASIC2.69□□□□□ -1.98
FOXN3O00409 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.69□□□□□ -1.98
FOXN3O00409 AC011476.5-201ENST00000615594 130 ntBASIC2.69□□□□□ -1.98
FOXN3O00409 U4atac.1-201ENST00000618345 95 ntBASIC2.69□□□□□ -1.98
FOXN3O00409 MIR8062-201ENST00000621515 85 ntBASIC2.69□□□□□ -1.98
FOXN3O00409 U6.92-201ENST00000636464 89 ntBASIC2.69□□□□□ -1.98
FOXN3O00409 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 262.3 ms