Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC073325.2-201ENST00000339545 159 ntBASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNU4-90P-201ENST00000362773 141 ntBASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 U3.8-201ENST00000363675 217 ntBASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 SNORD56.5-201ENST00000364281 72 ntBASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 SNORD31B-201ENST00000364977 69 ntBASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNU6-438P-201ENST00000365561 103 ntBASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 SNORA44-201ENST00000384584 132 ntBASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 SNORA46-201ENST00000384762 135 ntBASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 MIR561-201ENST00000385216 97 ntBASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 MIR300-201ENST00000401138 83 ntBASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 AL357139.1-201ENST00000407792 426 ntBASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNA5SP274-201ENST00000410484 108 ntBASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNU2-48P-201ENST00000410694 191 ntBASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 AL390729.2-201ENST00000416137 156 ntBASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 HMGN2P18-201ENST00000450680 270 ntBASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 SNORD127-201ENST00000458892 86 ntBASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 RN7SL20P-201ENST00000488827 297 ntBASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 HMGB3P17-201ENST00000504195 649 ntBASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNU6-991P-201ENST00000516168 107 ntBASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 DEFB108E-201ENST00000524692 240 ntBASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC023157.2-201ENST00000540596 141 ntBASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 PRELID2P1-201ENST00000552837 301 ntBASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC110588.1-201ENST00000559699 137 ntBASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC022441.3-201ENST00000605737 136 ntBASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC006001.4-201ENST00000622243 395 ntBASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC006386.2-201ENST00000624491 75 ntBASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 AC012005.1-201ENST00000624575 75 ntBASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 AL137790.1-201ENST00000634283 177 ntBASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.16□□□□□ -2.06
IGHV4-28A0A0C4DH34 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.15□□□□□ -2.06
IGHV4-28A0A0C4DH34 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.15□□□□□ -2.06
IGHV4-28A0A0C4DH34 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.15□□□□□ -2.06
IGHV4-28A0A0C4DH34 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
IGHV4-28A0A0C4DH34 RNU6-454P-201ENST00000364292 107 ntBASIC2.15□□□□□ -2.07
IGHV4-28A0A0C4DH34 Y_RNA.237-201ENST00000364439 102 ntBASIC2.15□□□□□ -2.07
IGHV4-28A0A0C4DH34 Y_RNA.307-201ENST00000365022 117 ntBASIC2.15□□□□□ -2.07
IGHV4-28A0A0C4DH34 RNU6-290P-201ENST00000365212 101 ntBASIC2.15□□□□□ -2.07
IGHV4-28A0A0C4DH34 Y_RNA.618-201ENST00000410949 107 ntBASIC2.15□□□□□ -2.07
IGHV4-28A0A0C4DH34 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.15□□□□□ -2.07
IGHV4-28A0A0C4DH34 COTL1P1-201ENST00000422309 375 ntBASIC2.15□□□□□ -2.07
IGHV4-28A0A0C4DH34 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.15□□□□□ -2.07
IGHV4-28A0A0C4DH34 UQCRHP3-201ENST00000451503 251 ntBASIC2.15□□□□□ -2.07
IGHV4-28A0A0C4DH34 RNU6-1132P-201ENST00000459214 107 ntBASIC2.15□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC018868.1-201ENST00000491307 315 ntBASIC2.15□□□□□ -2.07
IGHV4-28A0A0C4DH34 SCGB1D5P-201ENST00000515134 247 ntBASIC2.15□□□□□ -2.07
IGHV4-28A0A0C4DH34 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.15□□□□□ -2.07
IGHV4-28A0A0C4DH34 RNU6-1338P-201ENST00000516328 91 ntBASIC2.15□□□□□ -2.07
IGHV4-28A0A0C4DH34 RNU6-155P-201ENST00000516347 100 ntBASIC2.15□□□□□ -2.07
IGHV4-28A0A0C4DH34 RNU6-667P-201ENST00000517186 102 ntBASIC2.15□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.15□□□□□ -2.07
IGHV4-28A0A0C4DH34 IGHVIII-44-202ENST00000636235 289 ntBASIC2.15□□□□□ -2.07
IGHV4-28A0A0C4DH34 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.15□□□□□ -2.07
IGHV4-28A0A0C4DH34 FAM35CP-201ENST00000554755 2470 ntBASIC2.15□□□□□ -2.07
IGHV4-28A0A0C4DH34 MTND5P6-201ENST00000422338 1798 ntBASIC2.15□□□□□ -2.07
IGHV4-28A0A0C4DH34 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 AL391987.6-201ENST00000305671 199 ntBASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 MIR410-201ENST00000362222 80 ntBASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 SNORD81.1-201ENST00000363064 77 ntBASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 Y_RNA.188-201ENST00000363952 111 ntBASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 SNORA25B-201ENST00000365507 128 ntBASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 Y_RNA.446-201ENST00000384178 104 ntBASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 MIR592-201ENST00000384959 97 ntBASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 AL139095.1-201ENST00000404326 391 ntBASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 RPL23AP36-201ENST00000413895 458 ntBASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 EEF1A1P41-201ENST00000414667 207 ntBASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 TOMM22P2-201ENST00000430735 237 ntBASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC016717.1-201ENST00000448918 286 ntBASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 NDUFB4P10-201ENST00000452541 359 ntBASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC005042.3-201ENST00000453230 174 ntBASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC016925.1-201ENST00000458303 298 ntBASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 RN7SL283P-201ENST00000489055 303 ntBASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC092185.1-201ENST00000491371 97 ntBASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 RN7SKP43-201ENST00000516173 320 ntBASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 SCARNA24.2-201ENST00000516968 130 ntBASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 RNU6-1271P-201ENST00000517049 105 ntBASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC107016.2-201ENST00000547968 190 ntBASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 LARP7P3-201ENST00000579888 337 ntBASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC025754.2-201ENST00000606491 432 ntBASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC007318.2-201ENST00000620999 243 ntBASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC008264.2-201ENST00000610193 3731 ntBASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC108206.1-201ENST00000570186 4159 ntBASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
IGHV4-28A0A0C4DH34 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.13□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC093831.2-201ENST00000624393 3427 ntBASIC2.13□□□□□ -2.07
IGHV4-28A0A0C4DH34 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
IGHV4-28A0A0C4DH34 Y_RNA.14-201ENST00000362415 103 ntBASIC2.13□□□□□ -2.07
IGHV4-28A0A0C4DH34 RN7SKP58-201ENST00000411010 305 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms