Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 RNU6-560P-201ENST00000364007 108 ntBASIC-0.29□□□□□ -2.46
TRAV12-3A0A0B4J271 RNU6-514P-201ENST00000384208 107 ntBASIC-0.29□□□□□ -2.46
TRAV12-3A0A0B4J271 SNORA36A-201ENST00000384221 132 ntBASIC-0.29□□□□□ -2.46
TRAV12-3A0A0B4J271 AC012306.1-201ENST00000423267 114 ntBASIC-0.29□□□□□ -2.46
TRAV12-3A0A0B4J271 MTATP6P16-201ENST00000434543 526 ntBASIC-0.29□□□□□ -2.46
TRAV12-3A0A0B4J271 SEPT7P4-201ENST00000437076 306 ntBASIC-0.29□□□□□ -2.46
TRAV12-3A0A0B4J271 AC013470.1-201ENST00000453438 462 ntBASIC-0.29□□□□□ -2.46
TRAV12-3A0A0B4J271 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.29□□□□□ -2.46
TRAV12-3A0A0B4J271 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC-0.29□□□□□ -2.46
TRAV12-3A0A0B4J271 LRRC34P2-201ENST00000514850 553 ntBASIC-0.29□□□□□ -2.46
TRAV12-3A0A0B4J271 AC104695.3-201ENST00000604052 296 ntBASIC-0.29□□□□□ -2.46
TRAV12-3A0A0B4J271 Y_RNA.46-201ENST00000362695 102 ntBASIC-0.3□□□□□ -2.46
TRAV12-3A0A0B4J271 SNORD114-26-201ENST00000363543 72 ntBASIC-0.3□□□□□ -2.46
TRAV12-3A0A0B4J271 Y_RNA.504-201ENST00000384481 104 ntBASIC-0.3□□□□□ -2.46
TRAV12-3A0A0B4J271 RNU6-1093P-201ENST00000391194 107 ntBASIC-0.3□□□□□ -2.46
TRAV12-3A0A0B4J271 RPS29P13-201ENST00000402041 169 ntBASIC-0.3□□□□□ -2.46
TRAV12-3A0A0B4J271 AC114491.1-201ENST00000416095 246 ntBASIC-0.3□□□□□ -2.46
TRAV12-3A0A0B4J271 MTND4P3-201ENST00000417829 541 ntBASIC-0.3□□□□□ -2.46
TRAV12-3A0A0B4J271 AL139396.1-201ENST00000421137 167 ntBASIC-0.3□□□□□ -2.46
TRAV12-3A0A0B4J271 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.3□□□□□ -2.46
TRAV12-3A0A0B4J271 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.3□□□□□ -2.46
TRAV12-3A0A0B4J271 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.3□□□□□ -2.46
TRAV12-3A0A0B4J271 RNU7-94P-201ENST00000459576 63 ntBASIC-0.3□□□□□ -2.46
TRAV12-3A0A0B4J271 RPL23AP54-201ENST00000495129 419 ntBASIC-0.3□□□□□ -2.46
TRAV12-3A0A0B4J271 AC079395.1-201ENST00000510981 262 ntBASIC-0.3□□□□□ -2.46
TRAV12-3A0A0B4J271 AC109479.2-201ENST00000517842 174 ntBASIC-0.3□□□□□ -2.46
TRAV12-3A0A0B4J271 AC025647.1-201ENST00000517879 253 ntBASIC-0.3□□□□□ -2.46
TRAV12-3A0A0B4J271 AC123904.2-201ENST00000548059 300 ntBASIC-0.3□□□□□ -2.46
TRAV12-3A0A0B4J271 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.3□□□□□ -2.46
TRAV12-3A0A0B4J271 MIR4305-201ENST00000583252 102 ntBASIC-0.3□□□□□ -2.46
TRAV12-3A0A0B4J271 RNU6-88P-201ENST00000606801 100 ntBASIC-0.3□□□□□ -2.46
TRAV12-3A0A0B4J271 AC072039.2-201ENST00000608883 439 ntBASIC-0.3□□□□□ -2.46
TRAV12-3A0A0B4J271 AC131235.4-201ENST00000609288 620 ntBASIC-0.3□□□□□ -2.46
TRAV12-3A0A0B4J271 AC005562.2-201ENST00000618264 111 ntBASIC-0.3□□□□□ -2.46
TRAV12-3A0A0B4J271 AL031667.3-201ENST00000620124 655 ntBASIC-0.3□□□□□ -2.46
TRAV12-3A0A0B4J271 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.31□□□□□ -2.46
TRAV12-3A0A0B4J271 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.31□□□□□ -2.46
TRAV12-3A0A0B4J271 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.31□□□□□ -2.46
TRAV12-3A0A0B4J271 RNU6-428P-201ENST00000362942 107 ntBASIC-0.31□□□□□ -2.46
TRAV12-3A0A0B4J271 SNORA25.3-201ENST00000363205 127 ntBASIC-0.31□□□□□ -2.46
TRAV12-3A0A0B4J271 SNORD118-201ENST00000363593 134 ntBASIC-0.31□□□□□ -2.46
TRAV12-3A0A0B4J271 SNORD113.3-201ENST00000364630 78 ntBASIC-0.31□□□□□ -2.46
TRAV12-3A0A0B4J271 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.31□□□□□ -2.46
TRAV12-3A0A0B4J271 RNU6-25P-201ENST00000383873 107 ntBASIC-0.31□□□□□ -2.46
TRAV12-3A0A0B4J271 RNU6-224P-201ENST00000384055 107 ntBASIC-0.31□□□□□ -2.46
TRAV12-3A0A0B4J271 RNU6-48P-201ENST00000384161 107 ntBASIC-0.31□□□□□ -2.46
TRAV12-3A0A0B4J271 RNU6-15P-201ENST00000384534 107 ntBASIC-0.31□□□□□ -2.46
TRAV12-3A0A0B4J271 RNU6-29P-201ENST00000384637 107 ntBASIC-0.31□□□□□ -2.46
TRAV12-3A0A0B4J271 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC-0.31□□□□□ -2.46
TRAV12-3A0A0B4J271 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.31□□□□□ -2.46
TRAV12-3A0A0B4J271 AC091874.1-201ENST00000511402 339 ntBASIC-0.31□□□□□ -2.46
TRAV12-3A0A0B4J271 RNU7-12P-201ENST00000516030 62 ntBASIC-0.31□□□□□ -2.46
TRAV12-3A0A0B4J271 RN7SKP164-201ENST00000516138 266 ntBASIC-0.31□□□□□ -2.46
TRAV12-3A0A0B4J271 SNORA40.12-201ENST00000516329 111 ntBASIC-0.31□□□□□ -2.46
TRAV12-3A0A0B4J271 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.31□□□□□ -2.46
TRAV12-3A0A0B4J271 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.31□□□□□ -2.46
TRAV12-3A0A0B4J271 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.31□□□□□ -2.46
TRAV12-3A0A0B4J271 MIR3612-201ENST00000579753 87 ntBASIC-0.31□□□□□ -2.46
TRAV12-3A0A0B4J271 AL117336.2-201ENST00000602435 335 ntBASIC-0.31□□□□□ -2.46
TRAV12-3A0A0B4J271 AC008250.2-201ENST00000615261 205 ntBASIC-0.31□□□□□ -2.46
TRAV12-3A0A0B4J271 SNORA43.4-201ENST00000629559 138 ntBASIC-0.31□□□□□ -2.46
TRAV12-3A0A0B4J271 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.32□□□□□ -2.46
TRAV12-3A0A0B4J271 RNU6-298P-201ENST00000390888 96 ntBASIC-0.32□□□□□ -2.46
TRAV12-3A0A0B4J271 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.32□□□□□ -2.46
TRAV12-3A0A0B4J271 SNORD83.1-201ENST00000411362 77 ntBASIC-0.32□□□□□ -2.46
TRAV12-3A0A0B4J271 AC008134.1-201ENST00000420943 193 ntBASIC-0.32□□□□□ -2.46
TRAV12-3A0A0B4J271 RPL37P21-201ENST00000435890 276 ntBASIC-0.32□□□□□ -2.46
TRAV12-3A0A0B4J271 MTND4P15-201ENST00000437913 1033 ntBASIC-0.32□□□□□ -2.46
TRAV12-3A0A0B4J271 AC074290.1-201ENST00000448883 135 ntBASIC-0.32□□□□□ -2.46
TRAV12-3A0A0B4J271 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.32□□□□□ -2.46
TRAV12-3A0A0B4J271 RNU7-57P-201ENST00000459540 60 ntBASIC-0.32□□□□□ -2.46
TRAV12-3A0A0B4J271 AC117522.1-201ENST00000509821 380 ntBASIC-0.32□□□□□ -2.46
TRAV12-3A0A0B4J271 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.32□□□□□ -2.46
TRAV12-3A0A0B4J271 RNU7-99P-201ENST00000516271 62 ntBASIC-0.32□□□□□ -2.46
TRAV12-3A0A0B4J271 AC107934.1-201ENST00000522215 217 ntBASIC-0.32□□□□□ -2.46
TRAV12-3A0A0B4J271 AC068587.4-201ENST00000533893 186 ntBASIC-0.32□□□□□ -2.46
TRAV12-3A0A0B4J271 AC009712.1-201ENST00000564938 316 ntBASIC-0.32□□□□□ -2.46
TRAV12-3A0A0B4J271 MTND4LP25-201ENST00000570218 163 ntBASIC-0.32□□□□□ -2.46
TRAV12-3A0A0B4J271 TCL6_2.1-201ENST00000615162 119 ntBASIC-0.32□□□□□ -2.46
TRAV12-3A0A0B4J271 MIR2909-201ENST00000617113 69 ntBASIC-0.32□□□□□ -2.46
TRAV12-3A0A0B4J271 RNY4P24-201ENST00000362735 96 ntBASIC-0.33□□□□□ -2.46
TRAV12-3A0A0B4J271 MIR526A1-201ENST00000384897 85 ntBASIC-0.33□□□□□ -2.46
TRAV12-3A0A0B4J271 MIR586-201ENST00000385035 97 ntBASIC-0.33□□□□□ -2.46
TRAV12-3A0A0B4J271 MIR644A-201ENST00000385262 94 ntBASIC-0.33□□□□□ -2.46
TRAV12-3A0A0B4J271 RNU6-679P-201ENST00000391003 106 ntBASIC-0.33□□□□□ -2.46
TRAV12-3A0A0B4J271 AL355994.1-201ENST00000424379 260 ntBASIC-0.33□□□□□ -2.46
TRAV12-3A0A0B4J271 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.33□□□□□ -2.46
TRAV12-3A0A0B4J271 RPL17P35-201ENST00000432217 549 ntBASIC-0.33□□□□□ -2.46
TRAV12-3A0A0B4J271 AC004386.2-201ENST00000441858 148 ntBASIC-0.33□□□□□ -2.46
TRAV12-3A0A0B4J271 RPS3AP17-201ENST00000472594 777 ntBASIC-0.33□□□□□ -2.46
TRAV12-3A0A0B4J271 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
TRAV12-3A0A0B4J271 AC023050.3-201ENST00000541142 333 ntBASIC-0.33□□□□□ -2.46
TRAV12-3A0A0B4J271 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.33□□□□□ -2.46
TRAV12-3A0A0B4J271 MTND3P13-201ENST00000574391 343 ntBASIC-0.33□□□□□ -2.46
TRAV12-3A0A0B4J271 MIR5006-201ENST00000583027 110 ntBASIC-0.33□□□□□ -2.46
TRAV12-3A0A0B4J271 AC008521.1-201ENST00000587471 187 ntBASIC-0.33□□□□□ -2.46
TRAV12-3A0A0B4J271 SNORA25.18-201ENST00000607153 114 ntBASIC-0.33□□□□□ -2.46
TRAV12-3A0A0B4J271 AC007684.1-201ENST00000609671 477 ntBASIC-0.33□□□□□ -2.46
TRAV12-3A0A0B4J271 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.33□□□□□ -2.46
TRAV12-3A0A0B4J271 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 167.8 ms