Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.31□□□□□ -2.36
TRBV6-7A0A0A0MS04 RMST_3.1-201ENST00000611651 109 ntBASIC0.31□□□□□ -2.36
TRBV6-7A0A0A0MS04 AC004223.4-201ENST00000612426 332 ntBASIC0.31□□□□□ -2.36
TRBV6-7A0A0A0MS04 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.31□□□□□ -2.36
TRBV6-7A0A0A0MS04 AC106754.1-201ENST00000562632 1513 ntBASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 RNU4-76P-201ENST00000364509 141 ntBASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 RNU6-950P-201ENST00000384651 107 ntBASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 RNA5SP323-201ENST00000391094 133 ntBASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 MRPL42P3-201ENST00000401492 326 ntBASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 AC098934.3-201ENST00000430450 190 ntBASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 RNU7-167P-201ENST00000459160 62 ntBASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 MTND2P14-201ENST00000482139 351 ntBASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 AC005178.1-201ENST00000508392 440 ntBASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 RNU6-311P-201ENST00000516224 102 ntBASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 RNU4-54P-201ENST00000516428 129 ntBASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 AP003461.1-201ENST00000528866 78 ntBASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 AC025423.5-201ENST00000550230 219 ntBASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 AC090049.2-201ENST00000550377 109 ntBASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 AC026470.2-201ENST00000561492 181 ntBASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 MIR4781-201ENST00000585250 76 ntBASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 AP000907.4-201ENST00000604143 237 ntBASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 Z84480.1-201ENST00000605131 311 ntBASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 AC064836.2-201ENST00000609491 462 ntBASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 AL096861.1-201ENST00000610899 123 ntBASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 AC104465.1-201ENST00000611365 139 ntBASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 MIR6504-201ENST00000613520 61 ntBASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 AC073349.3-201ENST00000617616 186 ntBASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 snoZ196.1-201ENST00000625269 89 ntBASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 AL442644.1-201ENST00000454390 3105 ntBASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 MTND4P5-201ENST00000435821 1374 ntBASIC0.3□□□□□ -2.36
TRBV6-7A0A0A0MS04 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.29□□□□□ -2.36
TRBV6-7A0A0A0MS04 RNU4-12P-201ENST00000365233 139 ntBASIC0.29□□□□□ -2.36
TRBV6-7A0A0A0MS04 RNU6-903P-201ENST00000391270 109 ntBASIC0.29□□□□□ -2.36
TRBV6-7A0A0A0MS04 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.29□□□□□ -2.36
TRBV6-7A0A0A0MS04 AL445305.1-201ENST00000432577 575 ntBASIC0.29□□□□□ -2.36
TRBV6-7A0A0A0MS04 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.29□□□□□ -2.36
TRBV6-7A0A0A0MS04 TPT1P7-201ENST00000458300 517 ntBASIC0.29□□□□□ -2.36
TRBV6-7A0A0A0MS04 AL049830.1-201ENST00000468034 425 ntBASIC0.29□□□□□ -2.36
TRBV6-7A0A0A0MS04 CCDC34P1-201ENST00000507441 517 ntBASIC0.29□□□□□ -2.36
TRBV6-7A0A0A0MS04 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.29□□□□□ -2.36
TRBV6-7A0A0A0MS04 AC105417.1-201ENST00000514691 285 ntBASIC0.29□□□□□ -2.36
TRBV6-7A0A0A0MS04 RNU6-947P-201ENST00000516264 106 ntBASIC0.29□□□□□ -2.36
TRBV6-7A0A0A0MS04 RNA5SP121-201ENST00000516537 101 ntBASIC0.29□□□□□ -2.36
TRBV6-7A0A0A0MS04 RNU1-142P-201ENST00000516682 145 ntBASIC0.29□□□□□ -2.36
TRBV6-7A0A0A0MS04 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.29□□□□□ -2.36
TRBV6-7A0A0A0MS04 AP002001.1-203ENST00000534002 267 ntBASIC0.29□□□□□ -2.36
TRBV6-7A0A0A0MS04 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.29□□□□□ -2.36
TRBV6-7A0A0A0MS04 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.29□□□□□ -2.36
TRBV6-7A0A0A0MS04 AC004584.2-201ENST00000570407 410 ntBASIC0.29□□□□□ -2.36
TRBV6-7A0A0A0MS04 AC006566.1-201ENST00000608943 513 ntBASIC0.29□□□□□ -2.36
TRBV6-7A0A0A0MS04 AL359075.3-201ENST00000613288 217 ntBASIC0.29□□□□□ -2.36
TRBV6-7A0A0A0MS04 MIR6788-201ENST00000618842 66 ntBASIC0.29□□□□□ -2.36
TRBV6-7A0A0A0MS04 U6.73-201ENST00000619194 103 ntBASIC0.29□□□□□ -2.36
TRBV6-7A0A0A0MS04 SCARNA4-201ENST00000629045 128 ntBASIC0.29□□□□□ -2.36
TRBV6-7A0A0A0MS04 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.29□□□□□ -2.36
TRBV6-7A0A0A0MS04 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 AP000568.1-201ENST00000282964 442 ntBASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 RNU6-227P-201ENST00000362865 103 ntBASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 Y_RNA.100-201ENST00000363141 102 ntBASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 RNU5F-7P-201ENST00000363696 115 ntBASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 RNU4-28P-201ENST00000364739 141 ntBASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 RNU6-1240P-201ENST00000365155 104 ntBASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 RNU6-1286P-201ENST00000383871 107 ntBASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 RNU6-424P-201ENST00000384367 105 ntBASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 RNU6-110P-201ENST00000384508 104 ntBASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 U8.16-201ENST00000391279 133 ntBASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 MIR1253-201ENST00000408273 105 ntBASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 MIR548J-201ENST00000408833 112 ntBASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 RNA5SP494-201ENST00000410653 129 ntBASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 RNU6-248P-201ENST00000410720 107 ntBASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 CDK8P2-201ENST00000415020 547 ntBASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 Z99497.1-201ENST00000421282 135 ntBASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 AL354692.1-201ENST00000423044 315 ntBASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 MTND3P9-201ENST00000429526 346 ntBASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 CALM2P4-201ENST00000430810 426 ntBASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 GMFBP1-201ENST00000467831 427 ntBASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 AC113410.1-201ENST00000505029 247 ntBASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 AC010493.1-201ENST00000513479 292 ntBASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 MIR98-201ENST00000606724 119 ntBASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 uc_338.11-201ENST00000619132 160 ntBASIC0.28□□□□□ -2.36
TRBV6-7A0A0A0MS04 RNU6-199P-201ENST00000362954 107 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms