Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 RNU6-728P-201ENST00000365375 104 ntBASIC4.07□□□□□ -1.76
NOD1Q9Y239 Y_RNA.420-201ENST00000384043 110 ntBASIC4.07□□□□□ -1.76
NOD1Q9Y239 MIR518C-201ENST00000384822 101 ntBASIC4.07□□□□□ -1.76
NOD1Q9Y239 AL355796.1-201ENST00000406706 323 ntBASIC4.07□□□□□ -1.76
NOD1Q9Y239 MIR1283-1-201ENST00000408494 87 ntBASIC4.07□□□□□ -1.76
NOD1Q9Y239 CYCSP4-201ENST00000429682 331 ntBASIC4.07□□□□□ -1.76
NOD1Q9Y239 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.07□□□□□ -1.76
NOD1Q9Y239 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.07□□□□□ -1.76
NOD1Q9Y239 RNU6-1211P-201ENST00000459179 105 ntBASIC4.07□□□□□ -1.76
NOD1Q9Y239 RNU7-57P-201ENST00000459540 60 ntBASIC4.07□□□□□ -1.76
NOD1Q9Y239 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.07□□□□□ -1.76
NOD1Q9Y239 RNU7-115P-201ENST00000516433 55 ntBASIC4.07□□□□□ -1.76
NOD1Q9Y239 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.07□□□□□ -1.76
NOD1Q9Y239 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.07□□□□□ -1.76
NOD1Q9Y239 MIR4474-201ENST00000579189 78 ntBASIC4.07□□□□□ -1.76
NOD1Q9Y239 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.07□□□□□ -1.76
NOD1Q9Y239 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
NOD1Q9Y239 MAPK10-373ENST00000641983 6772 ntBASIC4.07□□□□□ -1.76
NOD1Q9Y239 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
NOD1Q9Y239 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NOD1Q9Y239 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NOD1Q9Y239 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
NOD1Q9Y239 Y_RNA.71-201ENST00000362892 104 ntBASIC4.06□□□□□ -1.76
NOD1Q9Y239 Y_RNA.127-201ENST00000363386 109 ntBASIC4.06□□□□□ -1.76
NOD1Q9Y239 Y_RNA.218-201ENST00000364218 104 ntBASIC4.06□□□□□ -1.76
NOD1Q9Y239 HMGN2P8-201ENST00000391458 268 ntBASIC4.06□□□□□ -1.76
NOD1Q9Y239 MIR300-201ENST00000401138 83 ntBASIC4.06□□□□□ -1.76
NOD1Q9Y239 SNORA36B-201ENST00000410438 131 ntBASIC4.06□□□□□ -1.76
NOD1Q9Y239 AL121890.1-201ENST00000435457 205 ntBASIC4.06□□□□□ -1.76
NOD1Q9Y239 RPS27P26-201ENST00000494583 239 ntBASIC4.06□□□□□ -1.76
NOD1Q9Y239 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.06□□□□□ -1.76
NOD1Q9Y239 RNU6-1337P-201ENST00000516525 95 ntBASIC4.06□□□□□ -1.76
NOD1Q9Y239 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.06□□□□□ -1.76
NOD1Q9Y239 LARP7P3-201ENST00000579888 337 ntBASIC4.06□□□□□ -1.76
NOD1Q9Y239 AL137849.1-201ENST00000604767 169 ntBASIC4.06□□□□□ -1.76
NOD1Q9Y239 MIR8058-201ENST00000615737 89 ntBASIC4.06□□□□□ -1.76
NOD1Q9Y239 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NOD1Q9Y239 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.06□□□□□ -1.76
NOD1Q9Y239 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.06□□□□□ -1.76
NOD1Q9Y239 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NOD1Q9Y239 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.05□□□□□ -1.76
NOD1Q9Y239 MIR539-201ENST00000365690 78 ntBASIC4.05□□□□□ -1.76
NOD1Q9Y239 SNORA20B-201ENST00000384220 132 ntBASIC4.05□□□□□ -1.76
NOD1Q9Y239 Y_RNA.542-201ENST00000384641 111 ntBASIC4.05□□□□□ -1.76
NOD1Q9Y239 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
NOD1Q9Y239 RNA5SP354-201ENST00000391247 136 ntBASIC4.05□□□□□ -1.76
NOD1Q9Y239 NDUFB4P4-201ENST00000404822 243 ntBASIC4.05□□□□□ -1.76
NOD1Q9Y239 MIR1294-201ENST00000408503 142 ntBASIC4.05□□□□□ -1.76
NOD1Q9Y239 HSPE1P13-201ENST00000451143 297 ntBASIC4.05□□□□□ -1.76
NOD1Q9Y239 RPL31P61-201ENST00000496160 376 ntBASIC4.05□□□□□ -1.76
NOD1Q9Y239 RNA5SP112-201ENST00000515937 99 ntBASIC4.05□□□□□ -1.76
NOD1Q9Y239 RNU6-1333P-201ENST00000516162 93 ntBASIC4.05□□□□□ -1.76
NOD1Q9Y239 MIR4753-201ENST00000585119 83 ntBASIC4.05□□□□□ -1.76
NOD1Q9Y239 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.05□□□□□ -1.76
NOD1Q9Y239 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.05□□□□□ -1.76
NOD1Q9Y239 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.05□□□□□ -1.76
NOD1Q9Y239 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
NOD1Q9Y239 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.05□□□□□ -1.76
NOD1Q9Y239 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.04□□□□□ -1.76
NOD1Q9Y239 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
NOD1Q9Y239 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
NOD1Q9Y239 SNORD14D-201ENST00000384390 87 ntBASIC4.04□□□□□ -1.76
NOD1Q9Y239 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.04□□□□□ -1.76
NOD1Q9Y239 AC114982.1-201ENST00000469402 321 ntBASIC4.04□□□□□ -1.76
NOD1Q9Y239 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.04□□□□□ -1.76
NOD1Q9Y239 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.04□□□□□ -1.76
NOD1Q9Y239 AL359881.1-201ENST00000602916 267 ntBASIC4.04□□□□□ -1.76
NOD1Q9Y239 MIR3651-201ENST00000630427 90 ntBASIC4.04□□□□□ -1.76
NOD1Q9Y239 IPO8P1-201ENST00000455509 3109 ntBASIC4.04□□□□□ -1.76
NOD1Q9Y239 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NOD1Q9Y239 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NOD1Q9Y239 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
NOD1Q9Y239 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.03□□□□□ -1.76
NOD1Q9Y239 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
NOD1Q9Y239 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
NOD1Q9Y239 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NOD1Q9Y239 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
NOD1Q9Y239 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NOD1Q9Y239 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NOD1Q9Y239 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
NOD1Q9Y239 SNORA27.1-201ENST00000362604 124 ntBASIC4.03□□□□□ -1.76
NOD1Q9Y239 SNORD6-201ENST00000365444 73 ntBASIC4.03□□□□□ -1.76
NOD1Q9Y239 SNORD116-13-201ENST00000384408 92 ntBASIC4.03□□□□□ -1.76
NOD1Q9Y239 SNORD20-201ENST00000384550 80 ntBASIC4.03□□□□□ -1.76
NOD1Q9Y239 MIR634-201ENST00000385208 97 ntBASIC4.03□□□□□ -1.76
NOD1Q9Y239 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.03□□□□□ -1.76
NOD1Q9Y239 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.03□□□□□ -1.76
NOD1Q9Y239 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.03□□□□□ -1.76
NOD1Q9Y239 RNU6-1234P-201ENST00000516877 103 ntBASIC4.03□□□□□ -1.76
NOD1Q9Y239 RNU6-711P-201ENST00000517255 106 ntBASIC4.03□□□□□ -1.76
NOD1Q9Y239 AC008011.1-201ENST00000545989 227 ntBASIC4.03□□□□□ -1.76
NOD1Q9Y239 AC005000.2-201ENST00000605468 310 ntBASIC4.03□□□□□ -1.76
NOD1Q9Y239 snoZ196.1-201ENST00000625269 89 ntBASIC4.03□□□□□ -1.76
NOD1Q9Y239 ZNF702P-202ENST00000434269 1966 ntBASIC4.03□□□□□ -1.76
NOD1Q9Y239 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
NOD1Q9Y239 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
NOD1Q9Y239 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
NOD1Q9Y239 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NOD1Q9Y239 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
NOD1Q9Y239 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 191.2 ms