Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM35Q9UPQ4 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM35Q9UPQ4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM35Q9UPQ4 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM35Q9UPQ4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM35Q9UPQ4 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM35Q9UPQ4 SNORA60-201ENST00000362396 134 ntBASIC5.26□□□□□ -1.57
TRIM35Q9UPQ4 Y_RNA.316-201ENST00000365118 111 ntBASIC5.26□□□□□ -1.57
TRIM35Q9UPQ4 Y_RNA.360-201ENST00000365512 102 ntBASIC5.26□□□□□ -1.57
TRIM35Q9UPQ4 SNORA18-201ENST00000384416 132 ntBASIC5.26□□□□□ -1.57
TRIM35Q9UPQ4 SNORA12-201ENST00000391162 147 ntBASIC5.26□□□□□ -1.57
TRIM35Q9UPQ4 MIR1193-201ENST00000408109 78 ntBASIC5.26□□□□□ -1.57
TRIM35Q9UPQ4 RNU6-887P-201ENST00000410660 100 ntBASIC5.26□□□□□ -1.57
TRIM35Q9UPQ4 YME1L1P1-201ENST00000429435 297 ntBASIC5.26□□□□□ -1.57
TRIM35Q9UPQ4 RPL29P14-201ENST00000495837 428 ntBASIC5.26□□□□□ -1.57
TRIM35Q9UPQ4 Y_RNA.666-201ENST00000516187 112 ntBASIC5.26□□□□□ -1.57
TRIM35Q9UPQ4 Y_RNA.705-201ENST00000516862 110 ntBASIC5.26□□□□□ -1.57
TRIM35Q9UPQ4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM35Q9UPQ4 AC004944.1-201ENST00000517807 3059 ntBASIC5.26□□□□□ -1.57
TRIM35Q9UPQ4 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TRIM35Q9UPQ4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM35Q9UPQ4 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM35Q9UPQ4 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM35Q9UPQ4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM35Q9UPQ4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM35Q9UPQ4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM35Q9UPQ4 AC022893.2-201ENST00000564832 3296 ntBASIC5.26□□□□□ -1.57
TRIM35Q9UPQ4 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM35Q9UPQ4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM35Q9UPQ4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM35Q9UPQ4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM35Q9UPQ4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM35Q9UPQ4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM35Q9UPQ4 SNORD35B-201ENST00000363660 87 ntBASIC5.25□□□□□ -1.57
TRIM35Q9UPQ4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM35Q9UPQ4 MIR493-201ENST00000385254 89 ntBASIC5.25□□□□□ -1.57
TRIM35Q9UPQ4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM35Q9UPQ4 RPL32P35-201ENST00000415214 394 ntBASIC5.25□□□□□ -1.57
TRIM35Q9UPQ4 AL161651.1-201ENST00000440882 223 ntBASIC5.25□□□□□ -1.57
TRIM35Q9UPQ4 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TRIM35Q9UPQ4 KRTAP13-6P-201ENST00000508999 371 ntBASIC5.25□□□□□ -1.57
TRIM35Q9UPQ4 AC134698.5-201ENST00000519444 336 ntBASIC5.25□□□□□ -1.57
TRIM35Q9UPQ4 AC004486.1-201ENST00000546846 233 ntBASIC5.25□□□□□ -1.57
TRIM35Q9UPQ4 AC069240.1-201ENST00000548774 375 ntBASIC5.25□□□□□ -1.57
TRIM35Q9UPQ4 AC024220.1-201ENST00000603675 484 ntBASIC5.25□□□□□ -1.57
TRIM35Q9UPQ4 RNU6-91P-201ENST00000607774 107 ntBASIC5.25□□□□□ -1.57
TRIM35Q9UPQ4 AC069200.1-201ENST00000609511 323 ntBASIC5.25□□□□□ -1.57
TRIM35Q9UPQ4 MIR548BB-201ENST00000626714 66 ntBASIC5.25□□□□□ -1.57
TRIM35Q9UPQ4 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
TRIM35Q9UPQ4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM35Q9UPQ4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM35Q9UPQ4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM35Q9UPQ4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM35Q9UPQ4 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM35Q9UPQ4 Y_RNA.155-201ENST00000363632 101 ntBASIC5.24□□□□□ -1.57
TRIM35Q9UPQ4 RNU6-1229P-201ENST00000364295 107 ntBASIC5.24□□□□□ -1.57
TRIM35Q9UPQ4 RNY1P4-201ENST00000384595 115 ntBASIC5.24□□□□□ -1.57
TRIM35Q9UPQ4 MIR1283-1-201ENST00000408494 87 ntBASIC5.24□□□□□ -1.57
TRIM35Q9UPQ4 RNU6-733P-201ENST00000410759 104 ntBASIC5.24□□□□□ -1.57
TRIM35Q9UPQ4 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC5.24□□□□□ -1.57
TRIM35Q9UPQ4 SNRPGP13-201ENST00000442212 177 ntBASIC5.24□□□□□ -1.57
TRIM35Q9UPQ4 PTMAP3-201ENST00000447474 330 ntBASIC5.24□□□□□ -1.57
TRIM35Q9UPQ4 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM35Q9UPQ4 TOMM20P2-201ENST00000540082 421 ntBASIC5.24□□□□□ -1.57
TRIM35Q9UPQ4 AC233702.9-201ENST00000581528 203 ntBASIC5.24□□□□□ -1.57
TRIM35Q9UPQ4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.24□□□□□ -1.57
TRIM35Q9UPQ4 MIR3199-2-201ENST00000636243 86 ntBASIC5.24□□□□□ -1.57
TRIM35Q9UPQ4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM35Q9UPQ4 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM35Q9UPQ4 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM35Q9UPQ4 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM35Q9UPQ4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM35Q9UPQ4 SNORD45B-201ENST00000364617 72 ntBASIC5.23□□□□□ -1.57
TRIM35Q9UPQ4 MIR513A2-201ENST00000385249 127 ntBASIC5.23□□□□□ -1.57
TRIM35Q9UPQ4 AC083863.1-201ENST00000438811 231 ntBASIC5.23□□□□□ -1.57
TRIM35Q9UPQ4 RPL7AP28-201ENST00000464513 571 ntBASIC5.23□□□□□ -1.57
TRIM35Q9UPQ4 Y_RNA.659-201ENST00000515994 113 ntBASIC5.23□□□□□ -1.57
TRIM35Q9UPQ4 MIR6875-201ENST00000617506 72 ntBASIC5.23□□□□□ -1.57
TRIM35Q9UPQ4 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM35Q9UPQ4 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM35Q9UPQ4 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM35Q9UPQ4 AC011266.1-201ENST00000624119 3569 ntBASIC5.22□□□□□ -1.57
TRIM35Q9UPQ4 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
TRIM35Q9UPQ4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
TRIM35Q9UPQ4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM35Q9UPQ4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
TRIM35Q9UPQ4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM35Q9UPQ4 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
TRIM35Q9UPQ4 SNORA2.2-201ENST00000365473 135 ntBASIC5.22□□□□□ -1.57
TRIM35Q9UPQ4 MIR518F-201ENST00000384973 87 ntBASIC5.22□□□□□ -1.57
TRIM35Q9UPQ4 MIR300-201ENST00000401138 83 ntBASIC5.22□□□□□ -1.57
TRIM35Q9UPQ4 RPS12P18-201ENST00000442381 270 ntBASIC5.22□□□□□ -1.57
TRIM35Q9UPQ4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM35Q9UPQ4 RNU5F-4P-201ENST00000516581 114 ntBASIC5.22□□□□□ -1.57
TRIM35Q9UPQ4 RNU7-172P-201ENST00000517125 64 ntBASIC5.22□□□□□ -1.57
TRIM35Q9UPQ4 MIR4305-201ENST00000583252 102 ntBASIC5.22□□□□□ -1.57
TRIM35Q9UPQ4 AC091167.4-201ENST00000605079 184 ntBASIC5.22□□□□□ -1.57
TRIM35Q9UPQ4 AC091304.10-201ENST00000641554 121 ntBASIC5.22□□□□□ -1.57
TRIM35Q9UPQ4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM35Q9UPQ4 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms