Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.21□□□□□ -1.9
SYNPO2Q9UMS6 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.21□□□□□ -1.9
SYNPO2Q9UMS6 AL391987.6-201ENST00000305671 199 ntBASIC3.2□□□□□ -1.9
SYNPO2Q9UMS6 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SYNPO2Q9UMS6 SNORD115-8-201ENST00000363856 82 ntBASIC3.2□□□□□ -1.9
SYNPO2Q9UMS6 RNU1-112P-201ENST00000364401 164 ntBASIC3.2□□□□□ -1.9
SYNPO2Q9UMS6 SNORA20.1-201ENST00000364790 130 ntBASIC3.2□□□□□ -1.9
SYNPO2Q9UMS6 Y_RNA.286-201ENST00000364813 102 ntBASIC3.2□□□□□ -1.9
SYNPO2Q9UMS6 SNORD115-38-201ENST00000365037 82 ntBASIC3.2□□□□□ -1.9
SYNPO2Q9UMS6 AC096920.1-201ENST00000423991 241 ntBASIC3.2□□□□□ -1.9
SYNPO2Q9UMS6 AC005002.2-201ENST00000438228 269 ntBASIC3.2□□□□□ -1.9
SYNPO2Q9UMS6 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.2□□□□□ -1.9
SYNPO2Q9UMS6 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.2□□□□□ -1.9
SYNPO2Q9UMS6 AC108938.1-201ENST00000451204 136 ntBASIC3.2□□□□□ -1.9
SYNPO2Q9UMS6 RNU6-111P-201ENST00000517179 105 ntBASIC3.2□□□□□ -1.9
SYNPO2Q9UMS6 AL138963.2-201ENST00000605137 226 ntBASIC3.2□□□□□ -1.9
SYNPO2Q9UMS6 AL442067.1-201ENST00000613261 223 ntBASIC3.2□□□□□ -1.9
SYNPO2Q9UMS6 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SYNPO2Q9UMS6 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SYNPO2Q9UMS6 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SYNPO2Q9UMS6 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
SYNPO2Q9UMS6 RNU6-626P-201ENST00000363354 107 ntBASIC3.19□□□□□ -1.9
SYNPO2Q9UMS6 SNORD27-201ENST00000363981 72 ntBASIC3.19□□□□□ -1.9
SYNPO2Q9UMS6 RNU4-56P-201ENST00000364700 142 ntBASIC3.19□□□□□ -1.9
SYNPO2Q9UMS6 MIR208B-201ENST00000401172 77 ntBASIC3.19□□□□□ -1.9
SYNPO2Q9UMS6 CBX3P9-201ENST00000402326 552 ntBASIC3.19□□□□□ -1.9
SYNPO2Q9UMS6 MRPL35P1-201ENST00000404272 572 ntBASIC3.19□□□□□ -1.9
SYNPO2Q9UMS6 RNU6-847P-201ENST00000411115 108 ntBASIC3.19□□□□□ -1.9
SYNPO2Q9UMS6 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.19□□□□□ -1.9
SYNPO2Q9UMS6 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.19□□□□□ -1.9
SYNPO2Q9UMS6 snoU13.14-201ENST00000459372 104 ntBASIC3.19□□□□□ -1.9
SYNPO2Q9UMS6 AC003982.1-202ENST00000469928 248 ntBASIC3.19□□□□□ -1.9
SYNPO2Q9UMS6 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.19□□□□□ -1.9
SYNPO2Q9UMS6 RNU6-1023P-201ENST00000516137 106 ntBASIC3.19□□□□□ -1.9
SYNPO2Q9UMS6 RNU6-496P-201ENST00000516145 99 ntBASIC3.19□□□□□ -1.9
SYNPO2Q9UMS6 SNORA31.6-201ENST00000516241 130 ntBASIC3.19□□□□□ -1.9
SYNPO2Q9UMS6 RNU6-1338P-201ENST00000516328 91 ntBASIC3.19□□□□□ -1.9
SYNPO2Q9UMS6 RNA5SP282-201ENST00000516355 108 ntBASIC3.19□□□□□ -1.9
SYNPO2Q9UMS6 SNORA9.3-201ENST00000516383 129 ntBASIC3.19□□□□□ -1.9
SYNPO2Q9UMS6 SNORA25.14-201ENST00000516481 132 ntBASIC3.19□□□□□ -1.9
SYNPO2Q9UMS6 RNU6-1198P-201ENST00000516904 67 ntBASIC3.19□□□□□ -1.9
SYNPO2Q9UMS6 RRN3P3-201ENST00000549207 578 ntBASIC3.19□□□□□ -1.9
SYNPO2Q9UMS6 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.19□□□□□ -1.9
SYNPO2Q9UMS6 ZNF861P-201ENST00000588126 639 ntBASIC3.19□□□□□ -1.9
SYNPO2Q9UMS6 MZT1P2-201ENST00000604387 248 ntBASIC3.19□□□□□ -1.9
SYNPO2Q9UMS6 UCA1.1-201ENST00000620952 75 ntBASIC3.19□□□□□ -1.9
SYNPO2Q9UMS6 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.18□□□□□ -1.9
SYNPO2Q9UMS6 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SYNPO2Q9UMS6 RNU6-137P-201ENST00000363680 108 ntBASIC3.18□□□□□ -1.9
SYNPO2Q9UMS6 RNU6-20P-201ENST00000384106 107 ntBASIC3.18□□□□□ -1.9
SYNPO2Q9UMS6 Y_RNA.581-201ENST00000391017 97 ntBASIC3.18□□□□□ -1.9
SYNPO2Q9UMS6 RPS26P42-201ENST00000413485 326 ntBASIC3.18□□□□□ -1.9
SYNPO2Q9UMS6 Z98742.2-201ENST00000431564 187 ntBASIC3.18□□□□□ -1.9
SYNPO2Q9UMS6 RPS29P6-201ENST00000438196 145 ntBASIC3.18□□□□□ -1.9
SYNPO2Q9UMS6 HSPE1P25-201ENST00000455484 251 ntBASIC3.18□□□□□ -1.9
SYNPO2Q9UMS6 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.18□□□□□ -1.9
SYNPO2Q9UMS6 SNORA40.9-201ENST00000515895 93 ntBASIC3.18□□□□□ -1.9
SYNPO2Q9UMS6 CYP4A27P-201ENST00000567218 190 ntBASIC3.18□□□□□ -1.9
SYNPO2Q9UMS6 AC055872.1-201ENST00000570978 278 ntBASIC3.18□□□□□ -1.9
SYNPO2Q9UMS6 MIR5194-201ENST00000582634 120 ntBASIC3.18□□□□□ -1.9
SYNPO2Q9UMS6 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.18□□□□□ -1.9
SYNPO2Q9UMS6 AL034555.1-201ENST00000604816 211 ntBASIC3.18□□□□□ -1.9
SYNPO2Q9UMS6 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.18□□□□□ -1.9
SYNPO2Q9UMS6 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.18□□□□□ -1.9
SYNPO2Q9UMS6 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SYNPO2Q9UMS6 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.18□□□□□ -1.9
SYNPO2Q9UMS6 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SYNPO2Q9UMS6 AL109809.4-201ENST00000603520 2185 ntBASIC3.17□□□□□ -1.9
SYNPO2Q9UMS6 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
SYNPO2Q9UMS6 RNU4-15P-201ENST00000362613 141 ntBASIC3.17□□□□□ -1.9
SYNPO2Q9UMS6 Y_RNA.539-201ENST00000384635 107 ntBASIC3.17□□□□□ -1.9
SYNPO2Q9UMS6 MIR186-201ENST00000384988 86 ntBASIC3.17□□□□□ -1.9
SYNPO2Q9UMS6 AL603910.2-201ENST00000407268 136 ntBASIC3.17□□□□□ -1.9
SYNPO2Q9UMS6 AC139712.2-201ENST00000424302 339 ntBASIC3.17□□□□□ -1.9
SYNPO2Q9UMS6 AC112220.1-201ENST00000434628 355 ntBASIC3.17□□□□□ -1.9
SYNPO2Q9UMS6 AP004217.1-201ENST00000480579 346 ntBASIC3.17□□□□□ -1.9
SYNPO2Q9UMS6 RPL36AP48-201ENST00000485521 314 ntBASIC3.17□□□□□ -1.9
SYNPO2Q9UMS6 MIR3923-201ENST00000579521 83 ntBASIC3.17□□□□□ -1.9
SYNPO2Q9UMS6 AC010999.1-201ENST00000611856 324 ntBASIC3.17□□□□□ -1.9
SYNPO2Q9UMS6 FO624990.1-201ENST00000636373 85 ntBASIC3.17□□□□□ -1.9
SYNPO2Q9UMS6 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SYNPO2Q9UMS6 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.17□□□□□ -1.9
SYNPO2Q9UMS6 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.16□□□□□ -1.9
SYNPO2Q9UMS6 snoU2_19.1-201ENST00000362361 80 ntBASIC3.16□□□□□ -1.9
SYNPO2Q9UMS6 RNU6-727P-201ENST00000363592 107 ntBASIC3.16□□□□□ -1.9
SYNPO2Q9UMS6 RNU6-338P-201ENST00000383888 105 ntBASIC3.16□□□□□ -1.9
SYNPO2Q9UMS6 Y_RNA.552-201ENST00000384665 112 ntBASIC3.16□□□□□ -1.9
SYNPO2Q9UMS6 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SYNPO2Q9UMS6 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.16□□□□□ -1.9
SYNPO2Q9UMS6 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.16□□□□□ -1.9
SYNPO2Q9UMS6 AC007215.1-201ENST00000464893 276 ntBASIC3.16□□□□□ -1.9
SYNPO2Q9UMS6 AC096725.1-201ENST00000514266 313 ntBASIC3.16□□□□□ -1.9
SYNPO2Q9UMS6 AC079598.5-201ENST00000547460 117 ntBASIC3.16□□□□□ -1.9
SYNPO2Q9UMS6 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.16□□□□□ -1.9
SYNPO2Q9UMS6 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.16□□□□□ -1.9
SYNPO2Q9UMS6 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.16□□□□□ -1.9
SYNPO2Q9UMS6 AL161431.1-201ENST00000618966 4205 ntBASIC3.16□□□□□ -1.9
SYNPO2Q9UMS6 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SYNPO2Q9UMS6 Y_RNA.54-201ENST00000362766 105 ntBASIC3.15□□□□□ -1.91
SYNPO2Q9UMS6 RNA5SP393-201ENST00000363423 117 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 629.5 ms