Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.62□□□□□ -1.99
NKX1-2Q9UD57 AP002404.1-201ENST00000532005 451 ntBASIC2.62□□□□□ -1.99
NKX1-2Q9UD57 ZNF861P-201ENST00000588126 639 ntBASIC2.62□□□□□ -1.99
NKX1-2Q9UD57 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
NKX1-2Q9UD57 RPL12P50-201ENST00000603116 116 ntBASIC2.62□□□□□ -1.99
NKX1-2Q9UD57 TCL6_2.1-201ENST00000615162 119 ntBASIC2.62□□□□□ -1.99
NKX1-2Q9UD57 MIR5739-201ENST00000619803 80 ntBASIC2.62□□□□□ -1.99
NKX1-2Q9UD57 7SK.10-201ENST00000621414 298 ntBASIC2.62□□□□□ -1.99
NKX1-2Q9UD57 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.62□□□□□ -1.99
NKX1-2Q9UD57 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
NKX1-2Q9UD57 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
NKX1-2Q9UD57 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
NKX1-2Q9UD57 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
NKX1-2Q9UD57 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.61□□□□□ -1.99
NKX1-2Q9UD57 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NKX1-2Q9UD57 Y_RNA.183-201ENST00000363882 113 ntBASIC2.61□□□□□ -1.99
NKX1-2Q9UD57 RNU6-961P-201ENST00000363893 105 ntBASIC2.61□□□□□ -1.99
NKX1-2Q9UD57 SNORA18.3-201ENST00000384122 132 ntBASIC2.61□□□□□ -1.99
NKX1-2Q9UD57 RNU6-793P-201ENST00000384233 104 ntBASIC2.61□□□□□ -1.99
NKX1-2Q9UD57 FO393413.1-201ENST00000402892 195 ntBASIC2.61□□□□□ -1.99
NKX1-2Q9UD57 AL033519.2-201ENST00000403958 392 ntBASIC2.61□□□□□ -1.99
NKX1-2Q9UD57 RNU6-121P-201ENST00000410525 99 ntBASIC2.61□□□□□ -1.99
NKX1-2Q9UD57 S100A11P2-201ENST00000467589 312 ntBASIC2.61□□□□□ -1.99
NKX1-2Q9UD57 AC098869.1-201ENST00000481627 292 ntBASIC2.61□□□□□ -1.99
NKX1-2Q9UD57 AC091826.1-201ENST00000514065 313 ntBASIC2.61□□□□□ -1.99
NKX1-2Q9UD57 RNU6-408P-201ENST00000515910 100 ntBASIC2.61□□□□□ -1.99
NKX1-2Q9UD57 Y_RNA.683-201ENST00000516508 93 ntBASIC2.61□□□□□ -1.99
NKX1-2Q9UD57 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.61□□□□□ -1.99
NKX1-2Q9UD57 Y_RNA.772-201ENST00000606692 102 ntBASIC2.61□□□□□ -1.99
NKX1-2Q9UD57 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NKX1-2Q9UD57 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.61□□□□□ -1.99
NKX1-2Q9UD57 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NKX1-2Q9UD57 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.6□□□□□ -1.99
NKX1-2Q9UD57 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
NKX1-2Q9UD57 RNU5F-3P-201ENST00000363767 117 ntBASIC2.6□□□□□ -1.99
NKX1-2Q9UD57 Y_RNA.276-201ENST00000364732 109 ntBASIC2.6□□□□□ -1.99
NKX1-2Q9UD57 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.6□□□□□ -1.99
NKX1-2Q9UD57 OOSP1P1-201ENST00000423265 274 ntBASIC2.6□□□□□ -1.99
NKX1-2Q9UD57 AL161788.1-201ENST00000441805 169 ntBASIC2.6□□□□□ -1.99
NKX1-2Q9UD57 AL731563.1-201ENST00000442202 214 ntBASIC2.6□□□□□ -1.99
NKX1-2Q9UD57 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.6□□□□□ -1.99
NKX1-2Q9UD57 UBBP3-201ENST00000445497 241 ntBASIC2.6□□□□□ -1.99
NKX1-2Q9UD57 Z75741.1-201ENST00000446793 314 ntBASIC2.6□□□□□ -1.99
NKX1-2Q9UD57 AC007395.1-201ENST00000451333 677 ntBASIC2.6□□□□□ -1.99
NKX1-2Q9UD57 LINC01399-202ENST00000458450 244 ntBASIC2.6□□□□□ -1.99
NKX1-2Q9UD57 RPL26P26-201ENST00000480251 434 ntBASIC2.6□□□□□ -1.99
NKX1-2Q9UD57 SRIP1-201ENST00000489235 288 ntBASIC2.6□□□□□ -1.99
NKX1-2Q9UD57 SNORA40.9-201ENST00000515895 93 ntBASIC2.6□□□□□ -1.99
NKX1-2Q9UD57 SNORA31.11-201ENST00000516528 139 ntBASIC2.6□□□□□ -1.99
NKX1-2Q9UD57 RNU6-1098P-201ENST00000516772 96 ntBASIC2.6□□□□□ -1.99
NKX1-2Q9UD57 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.6□□□□□ -1.99
NKX1-2Q9UD57 AC026470.2-201ENST00000561492 181 ntBASIC2.6□□□□□ -1.99
NKX1-2Q9UD57 AC136932.1-201ENST00000574771 208 ntBASIC2.6□□□□□ -1.99
NKX1-2Q9UD57 AL356280.1-201ENST00000603614 379 ntBASIC2.6□□□□□ -1.99
NKX1-2Q9UD57 AC006023.1-201ENST00000603944 259 ntBASIC2.6□□□□□ -1.99
NKX1-2Q9UD57 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NKX1-2Q9UD57 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
NKX1-2Q9UD57 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
NKX1-2Q9UD57 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.6□□□□□ -1.99
NKX1-2Q9UD57 RNU1-62P-201ENST00000362599 164 ntBASIC2.59□□□□□ -1.99
NKX1-2Q9UD57 RNU6-937P-201ENST00000384325 106 ntBASIC2.59□□□□□ -1.99
NKX1-2Q9UD57 MIR627-201ENST00000384979 97 ntBASIC2.59□□□□□ -1.99
NKX1-2Q9UD57 MRPL35P1-201ENST00000404272 572 ntBASIC2.59□□□□□ -1.99
NKX1-2Q9UD57 RPL21P38-201ENST00000418090 167 ntBASIC2.59□□□□□ -1.99
NKX1-2Q9UD57 IFNA11P-201ENST00000446352 526 ntBASIC2.59□□□□□ -1.99
NKX1-2Q9UD57 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.59□□□□□ -1.99
NKX1-2Q9UD57 CKS1BP2-201ENST00000497342 240 ntBASIC2.59□□□□□ -1.99
NKX1-2Q9UD57 RNU6-965P-201ENST00000516721 96 ntBASIC2.59□□□□□ -1.99
NKX1-2Q9UD57 AL049779.4-201ENST00000604500 156 ntBASIC2.59□□□□□ -1.99
NKX1-2Q9UD57 AC130454.1-201ENST00000622948 401 ntBASIC2.59□□□□□ -1.99
NKX1-2Q9UD57 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.58□□□□□ -2
NKX1-2Q9UD57 AP006437.1-201ENST00000641440 3685 ntBASIC2.58□□□□□ -2
NKX1-2Q9UD57 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
NKX1-2Q9UD57 RNU6-626P-201ENST00000363354 107 ntBASIC2.58□□□□□ -2
NKX1-2Q9UD57 SNORA80A-201ENST00000363922 136 ntBASIC2.58□□□□□ -2
NKX1-2Q9UD57 SNORD56.5-201ENST00000364281 72 ntBASIC2.58□□□□□ -2
NKX1-2Q9UD57 SNORD87-201ENST00000364849 89 ntBASIC2.58□□□□□ -2
NKX1-2Q9UD57 SNORA9.2-201ENST00000365361 133 ntBASIC2.58□□□□□ -2
NKX1-2Q9UD57 Y_RNA.415-201ENST00000384012 112 ntBASIC2.58□□□□□ -2
NKX1-2Q9UD57 MIR490-201ENST00000384865 128 ntBASIC2.58□□□□□ -2
NKX1-2Q9UD57 MIR1294-201ENST00000408503 142 ntBASIC2.58□□□□□ -2
NKX1-2Q9UD57 ELOCP21-201ENST00000412558 336 ntBASIC2.58□□□□□ -2
NKX1-2Q9UD57 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.58□□□□□ -2
NKX1-2Q9UD57 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.58□□□□□ -2
NKX1-2Q9UD57 AL445687.1-201ENST00000439946 251 ntBASIC2.58□□□□□ -2
NKX1-2Q9UD57 IPO7P1-201ENST00000442031 636 ntBASIC2.58□□□□□ -2
NKX1-2Q9UD57 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.58□□□□□ -2
NKX1-2Q9UD57 AC009237.7-201ENST00000447357 229 ntBASIC2.58□□□□□ -2
NKX1-2Q9UD57 RPS23P5-201ENST00000495419 428 ntBASIC2.58□□□□□ -2
NKX1-2Q9UD57 AC083906.5-201ENST00000503722 328 ntBASIC2.58□□□□□ -2
NKX1-2Q9UD57 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.58□□□□□ -2
NKX1-2Q9UD57 RNU5F-4P-201ENST00000516581 114 ntBASIC2.58□□□□□ -2
NKX1-2Q9UD57 RNU1-117P-201ENST00000517041 158 ntBASIC2.58□□□□□ -2
NKX1-2Q9UD57 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.58□□□□□ -2
NKX1-2Q9UD57 MYL12BP1-201ENST00000569826 507 ntBASIC2.58□□□□□ -2
NKX1-2Q9UD57 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.58□□□□□ -2
NKX1-2Q9UD57 MIR4672-201ENST00000583126 81 ntBASIC2.58□□□□□ -2
NKX1-2Q9UD57 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.58□□□□□ -2
NKX1-2Q9UD57 AP000942.4-201ENST00000604811 241 ntBASIC2.58□□□□□ -2
NKX1-2Q9UD57 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms